Jatropha Genome Database

JcCB0164571.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0164571.10 - phase: 0 /partial
         (341 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g45370.1                                                       292   4e-79
Glyma12g06170.1                                                       127   2e-29
Glyma11g14190.2                                                       126   4e-29
Glyma11g14190.1                                                       126   4e-29
Glyma13g10670.1                                                        93   4e-19
Glyma04g35690.1                                                        86   5e-17
Glyma01g20940.1                                                        76   4e-14
Glyma20g21470.1                                                        75   2e-13
Glyma13g28800.1                                                        61   1e-09
Glyma01g35080.1                                                        60   3e-09
Glyma01g21630.1                                                        58   1e-08
Glyma15g10260.1                                                        58   2e-08

>Glyma08g45370.1 
          Length = 309

 Score =  292 bits (747), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 136/176 (77%), Positives = 160/176 (90%)

Query: 33  FQQLAVPLREYLDNFPKRKYLHPYERSLIELTLGEGNYEEVLRNVDALRKKVVSVGKEHA 92
            +++AVPLR Y++NFP + +LHPYERSLIELTLG+G YE VLR VD+LRK+VVSVGKEHA
Sbjct: 128 MKEIAVPLRTYVENFPNKMHLHPYERSLIELTLGDGYYEMVLRKVDSLRKRVVSVGKEHA 187

Query: 93  SVCAKSSTKREAEERLNEGLEKLQEIFKREGKAVDELLNIAKTLRAMPVVDLETPTLCLV 152
           S+CAKSS+KREAEERLNEGL+K++EIF +E K VD+LL IAKTLRAMPV++LETPTLCLV
Sbjct: 188 SLCAKSSSKREAEERLNEGLKKIEEIFAQERKVVDDLLGIAKTLRAMPVINLETPTLCLV 247

Query: 153 GAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHISFDFKYFQVTDTPGLLKRCD 208
           GAPNVGKSSLV +LSTGKPE+CNYPFTTRGILMGHI  +F+ FQVTDTPGLL+R D
Sbjct: 248 GAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIILNFQKFQVTDTPGLLRRHD 303


>Glyma12g06170.1 
          Length = 636

 Score =  127 bits (318), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 123/241 (51%)

Query: 31  FTFQQLAVPLREYLDNFPKRKYLHPYERSLIELTLGEGNYEEVLRNVDALRKKVVSVGKE 90
           +T Q     L   +D FP+   +HP+   L+ +   + +Y+  L  ++  R  +  + K+
Sbjct: 53  YTQQNFHDKLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLIGKIAKD 112

Query: 91  HASVCAKSSTKREAEERLNEGLEKLQEIFKREGKAVDELLNIAKTLRAMPVVDLETPTLC 150
           +  +     +    +      L ++  + KR G ++  L  + + +  +P +D  T T+ 
Sbjct: 113 YVKLLKYGDSLYRCKCLKVAALGRMCTVIKRVGPSLAYLEQVRQHMARLPSIDPNTRTIL 172

Query: 151 LVGAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHISFDFKYFQVTDTPGLLKRCDEE 210
           + G PNVGKSS +  ++    +V  Y FTT+ + +GH  + +  +QV DTPG+L R  E+
Sbjct: 173 ICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFED 232

Query: 211 RNNLEKLTLAVLRHLPTAILYVHDLTGECGTPVSDQFEIYKEIKERFSNHLWLDVVSKCD 270
           RN +E  ++  L HL  AIL+  D++G CG  ++ Q  ++  IK  F N   + V +K D
Sbjct: 233 RNIIEMCSITALAHLRAAILFFLDVSGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTD 292

Query: 271 L 271
           L
Sbjct: 293 L 293


>Glyma11g14190.2 
          Length = 674

 Score =  126 bits (316), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 123/241 (51%)

Query: 31  FTFQQLAVPLREYLDNFPKRKYLHPYERSLIELTLGEGNYEEVLRNVDALRKKVVSVGKE 90
           +T Q     L   +D FP+   +HP+   L+ +   + +Y+  L  ++  R  +  + K+
Sbjct: 53  YTQQNFHDKLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLIGKIAKD 112

Query: 91  HASVCAKSSTKREAEERLNEGLEKLQEIFKREGKAVDELLNIAKTLRAMPVVDLETPTLC 150
           +  +     +    +      L ++  + KR G ++  L  + + +  +P +D  T T+ 
Sbjct: 113 YVKLLKYGDSLYRCKCLKVAALGRMCTVIKRVGPSLAYLEQVRQHMARLPSIDPNTRTVL 172

Query: 151 LVGAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHISFDFKYFQVTDTPGLLKRCDEE 210
           + G PNVGKSS +  ++    +V  Y FTT+ + +GH  + +  +QV DTPG+L R  E+
Sbjct: 173 ICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFED 232

Query: 211 RNNLEKLTLAVLRHLPTAILYVHDLTGECGTPVSDQFEIYKEIKERFSNHLWLDVVSKCD 270
           RN +E  ++  L HL  AIL+  D++G CG  ++ Q  ++  IK  F N   + V +K D
Sbjct: 233 RNIIEMCSITALAHLRAAILFFLDVSGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTD 292

Query: 271 L 271
           L
Sbjct: 293 L 293


>Glyma11g14190.1 
          Length = 674

 Score =  126 bits (316), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 123/241 (51%)

Query: 31  FTFQQLAVPLREYLDNFPKRKYLHPYERSLIELTLGEGNYEEVLRNVDALRKKVVSVGKE 90
           +T Q     L   +D FP+   +HP+   L+ +   + +Y+  L  ++  R  +  + K+
Sbjct: 53  YTQQNFHDKLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLIGKIAKD 112

Query: 91  HASVCAKSSTKREAEERLNEGLEKLQEIFKREGKAVDELLNIAKTLRAMPVVDLETPTLC 150
           +  +     +    +      L ++  + KR G ++  L  + + +  +P +D  T T+ 
Sbjct: 113 YVKLLKYGDSLYRCKCLKVAALGRMCTVIKRVGPSLAYLEQVRQHMARLPSIDPNTRTVL 172

Query: 151 LVGAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHISFDFKYFQVTDTPGLLKRCDEE 210
           + G PNVGKSS +  ++    +V  Y FTT+ + +GH  + +  +QV DTPG+L R  E+
Sbjct: 173 ICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFED 232

Query: 211 RNNLEKLTLAVLRHLPTAILYVHDLTGECGTPVSDQFEIYKEIKERFSNHLWLDVVSKCD 270
           RN +E  ++  L HL  AIL+  D++G CG  ++ Q  ++  IK  F N   + V +K D
Sbjct: 233 RNIIEMCSITALAHLRAAILFFLDVSGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTD 292

Query: 271 L 271
           L
Sbjct: 293 L 293


>Glyma13g10670.1 
          Length = 149

 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 75/133 (56%)

Query: 139 MPVVDLETPTLCLVGAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHISFDFKYFQVT 198
           +P +D  T T+ + G PNVGKSS ++ +     +V  Y FTT+ + +GH  + +  +QV 
Sbjct: 4   LPSIDPNTTTILIYGYPNVGKSSFIKKIRRANVDVQPYAFTTKSLFVGHTDYKYLRYQVI 63

Query: 199 DTPGLLKRCDEERNNLEKLTLAVLRHLPTAILYVHDLTGECGTPVSDQFEIYKEIKERFS 258
           D P +L R  E+ N +E  ++  L HL  A+L++ D++G CG  ++ Q  ++   K  F 
Sbjct: 64  DMPWILDRPFEDCNIIEMCSITALAHLRAAMLFILDVSGCCGYSIAQQAALFHSTKSLFM 123

Query: 259 NHLWLDVVSKCDL 271
           N   + V +K DL
Sbjct: 124 NKPLIIVCNKTDL 136


>Glyma04g35690.1 
          Length = 253

 Score = 85.9 bits (211), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 11/161 (6%)

Query: 111 GLEKLQEIFKREGKAVDELLNIAKTLRAMPVVDLETPTLCLVGAPNVGKSSLVRILSTGK 170
            L  +  + KR   ++  L  + + +  +P +D  T T+ + G PNVGKSS +  +    
Sbjct: 25  ALGHMCTVIKRVDPSLAYLEQVRQHMARLPSIDPNTRTVLICGYPNVGKSSFINKIMRVD 84

Query: 171 PEVCNYPFTTRGILMGHISFDFKYFQVTDTPGLLKRCDEERNNLEKLTLAVLRHLPTAIL 230
            +V  Y FTT+ + +GHI + +  +QV DTPG+L R  E+ N +E  ++  L HL  AIL
Sbjct: 85  VDVQPYAFTTKSLFVGHIDYKYMRYQVIDTPGILDRPFEDYNIIEMCSITALTHLRAAIL 144

Query: 231 YVHDLTGECGTPVSDQFEIYKEIKERFSNHLWLDVVSKCDL 271
           +  DL             ++  IK  F N   + V +K DL
Sbjct: 145 FFLDLA-----------VLFHNIKSLFMNKSLIIVCNKTDL 174


>Glyma01g20940.1 
          Length = 127

 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 2/121 (1%)

Query: 139 MPVVDLETPTLCLVGAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHISFDFKYFQVT 198
           +P +D  T T+ + G PNVG+S  +  +     +V  Y FTT+ + +GHI + +  +QV 
Sbjct: 4   LPSIDPNTSTVLIYGYPNVGESLFINKIMRANVDVQPYAFTTKSLFVGHIDYKYLRYQVI 63

Query: 199 DTPGLLKRCDEERNNLEKLTLAVLRHLPTAILYVHDLTGECGTPVSDQFEIYKEIKERFS 258
           D      +  E+ N +E  ++  L HL  A+L++ D++G  G  ++ Q  ++  IK  F 
Sbjct: 64  DRD--FGQAFEDFNIIEMCSITALAHLRAAMLFILDVSGSYGYSIAQQVALFHSIKSLFM 121

Query: 259 N 259
           N
Sbjct: 122 N 122


>Glyma20g21470.1 
          Length = 218

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 12/161 (7%)

Query: 111 GLEKLQEIFKREGKAVDELLNIAKTLRAMPVVDLETPTLCLVGAPNVGKSSLVRILSTGK 170
            L +L  + KR G ++  L  + + +  +  +D  T  + + G PNVGKSS +  ++   
Sbjct: 49  ALGRLCTMIKRVGLSLAYLEQVRQYMARLSSIDPNTRIILIYGYPNVGKSSFINKITRVD 108

Query: 171 PEVCNYPFTTRGILMGHISFDFKYFQVTDTPGLLKRCDEERNNLEKLTLAVLRHLPTAIL 230
            +V  Y FTT+ + +GH  + +  +QV DTPG+L    E+ N +E  ++  L +L  AIL
Sbjct: 109 VDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDWPFEDCNIIEMCSITALAYLRAAIL 168

Query: 231 YVHDLTGECGTPVSDQFEIYKEIKERFSNHLWLDVVSKCDL 271
           +  D              ++  IK  F N   + V SK DL
Sbjct: 169 FFLDAV------------LFHSIKFLFMNKPLIIVCSKNDL 197


>Glyma13g28800.1 
          Length = 595

 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 5/95 (5%)

Query: 149 LCLVGAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHISFDF-KYFQVTDTPGLLKRC 207
           + +VGAPN GKS+L+ ++S  KP V NYPFTT    +G +SFD+     V D PGLL   
Sbjct: 298 VGIVGAPNAGKSTLLSVVSAAKPAVANYPFTTLLPNLGVVSFDYDSTMVVADLPGLL--- 354

Query: 208 DEERNNLEKLTLAVLRHLPTAILYVHDLTGECGTP 242
            E  +    L    LRH       VH + G    P
Sbjct: 355 -EGAHRGFGLGHEFLRHTERCSALVHVVDGSSQQP 388


>Glyma01g35080.1 
          Length = 319

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 89/191 (46%), Gaps = 28/191 (14%)

Query: 149 LCLVGAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHISFDFKYFQVTDTPGLLKRCD 208
           +  VG PN GKS+L+  +S  KP V +Y FTT    +G++++D     V D PGL+K   
Sbjct: 134 VSFVGMPNAGKSTLLGAISRAKPAVGDYAFTTLRPNLGNLNYDDLSITVADIPGLIKGAH 193

Query: 209 EERNNLEKLTLAVLRHLP-TAIL-YVHDLT----GECGTPVSDQFEIYKEIKERFSNHLW 262
           + R     L  A LRH+  T +L YV DL     G  G P  +Q              L 
Sbjct: 194 QNRG----LGHAFLRHIERTKVLAYVVDLAAALNGRKGIPPWEQLR-----------DLI 238

Query: 263 LDVVSKCDLLQELPVIFIAE--DSNGG---HFEMARYSKIGPSGAIHVSAKSREGLDELK 317
           L++    D L + P + +A   D  G    + E+ R  +  P     V A   EG+ +LK
Sbjct: 239 LELEYHQDGLSKRPSLIVANKTDEEGAEEVYKELKRRVQGVP--IFPVCAVLGEGIADLK 296

Query: 318 AKVHDLLVAQM 328
           A +  L+ ++M
Sbjct: 297 AGLKMLVSSEM 307


>Glyma01g21630.1 
          Length = 96

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 2/97 (2%)

Query: 149 LCLVGAPNVGKS-SLVRILSTGKPEVCNYPFTTRGILMGHISFDFKYFQVTDTPGLLKRC 207
           +C+V    VG S + +  ++    +V  Y FTT+   +GH +  +  +QV DTP +L R 
Sbjct: 1   MCIV-IKRVGASLAYLEQITRADVDVHPYAFTTKSFFVGHTNCKYLRYQVIDTPRILDRP 59

Query: 208 DEERNNLEKLTLAVLRHLPTAILYVHDLTGECGTPVS 244
            E+ N +E  ++  L HL  AIL++ D+ G CG  ++
Sbjct: 60  FEDCNIIEMCSITTLAHLRAAILFILDVFGSCGYSIA 96


>Glyma15g10260.1 
          Length = 440

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 151 LVGAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHISFDF-KYFQVTDTPGLLK 205
           +VGAPN GKS+L+ ++   KP V NYPFTT    +G +SFD+     V D PGLL+
Sbjct: 163 IVGAPNAGKSTLLSVVCAAKPAVANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLE 218