Jatropha Genome Database

JcCB0163231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0163231.10 - phase: 0 /partial
         (304 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g12160.1                                                       249   3e-66
Glyma12g04370.1                                                       207   1e-53
Glyma18g16100.1                                                       164   1e-40
Glyma12g04370.2                                                        99   7e-21

>Glyma11g12160.1 
          Length = 442

 Score =  249 bits (635), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 154/313 (49%), Positives = 199/313 (63%), Gaps = 37/313 (11%)

Query: 4   LHQIQHSWLSSV-TQKPALF-----PSKT-SPFKISF-SLNPSNTEPTPQNPPEFEPEPG 55
           +  +Q  W SS+    PA       PS T  P K+ F ++ P N E +    P+  PEP 
Sbjct: 1   MACLQPPWFSSLRVVSPAKLAAGPPPSTTYKPAKLLFWAVGPDNAESSEPASPD-APEPA 59

Query: 56  -PAHPVKLAFEKAKAYKKSTGDSKKTKLGQNLXXXXXXXXXXXXXXDEEVPASVKVAMEN 114
            P  PV+LAF KA AYK    + + +   +N+               +++P SVK+A+E 
Sbjct: 60  APVDPVELAFSKANAYKADYNNDENSAEERNVGDETP----------KDLPDSVKIAIEK 109

Query: 115 AKEYKKNKGVAGGGDVKGSARSETNSGLKGGNRENLVSGLVESSASNKEKLSISSMDFMG 174
           AK+YK+NK VA        A +ET  G  G +  +  SG  ++    K +LS+S MDF G
Sbjct: 110 AKKYKQNKAVA--------AVTETTQGSLGVSERS--SG--KNKVGKKGELSVSRMDFAG 157

Query: 175 LNFADKKRGKGLPPGLTPVTDSFPGGDLPEVEIIVGDTSKFGDPTTSMPKPSQ---ENDS 231
           L+FADKK  +GLPPGL P+++ +  GDLPEVE+I+GDTSKF D TT  P+P Q   E+++
Sbjct: 158 LDFADKKMTRGLPPGLVPISEPYFDGDLPEVELIIGDTSKFDDATT--PEPEQTNKEDEA 215

Query: 232 EFYKPKVSTWGVFPRPGNISKTFGGGRTIRPGDVLETAEERTAKDERTKQLLAAYRKKVG 291
           E YKPKVSTWGVFPRPGNISKTFGGGR IRPG+VLET EE+  K+ RTKQLLAAY+KK G
Sbjct: 216 ELYKPKVSTWGVFPRPGNISKTFGGGRVIRPGEVLETKEEKAVKEARTKQLLAAYKKKTG 275

Query: 292 LNVDPKLKLECEK 304
           LNVDPKLK ECE+
Sbjct: 276 LNVDPKLKSECEE 288


>Glyma12g04370.1 
          Length = 413

 Score =  207 bits (527), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/311 (45%), Positives = 180/311 (57%), Gaps = 53/311 (17%)

Query: 4   LHQIQHSWLSSV-TQKPALF----PSKTS-PFK-ISFSLNPSNTEPTPQNPPEFEPEPGP 56
           +  +Q  W SS+    PA      PS T+ P K + +++ P N E +  + P+  P+ GP
Sbjct: 1   MACLQPPWFSSLRVVSPAKLKAGPPSPTNKPAKPLCWAVGPDNAESSEPDAPKPVPD-GP 59

Query: 57  AHPVKLAFEKAKAYKKSTGDSKKTKLGQNLXXXXXXXXXXXXXXDEEVPASVKVAMENAK 116
             PVKLAF KA+AYK+S      + LG                  +++P SVK+A E AK
Sbjct: 60  VDPVKLAFSKAEAYKESI--KPNSGLG---TTQSAADNNDDNEAQKDLPDSVKIATEKAK 114

Query: 117 EYKKNKGVAGGGDVKGSARSETNSGLKGGNRENLVSGLVESSASNKEKLSISSMDFMGLN 176
           +YK+NKGVA        A SET  G  G +  +    ++++ A  K +LS+S MDF GL 
Sbjct: 115 KYKQNKGVA--------AVSETTQGYLGVSDRSSGKNVMDNKAGKKGELSVSRMDFAGLG 166

Query: 177 FADKKRGKGLPPGLTPVTDSFPGGDLPEVEIIVGDTSKFGDPTTSMPKPSQ---ENDSEF 233
           F                           VE+IVGDTSKF D TT  P+P Q   E+++E 
Sbjct: 167 F---------------------------VELIVGDTSKFDDATT--PEPEQTNKEDEAEL 197

Query: 234 YKPKVSTWGVFPRPGNISKTFGGGRTIRPGDVLETAEERTAKDERTKQLLAAYRKKVGLN 293
           YKPKVSTWGVFPRPGNISKTFGGGR IRPG+VLET EE+  K+ RT+QLLAA +KKVGLN
Sbjct: 198 YKPKVSTWGVFPRPGNISKTFGGGRVIRPGEVLETEEEKAVKEARTEQLLAADKKKVGLN 257

Query: 294 VDPKLKLECEK 304
           VDPKLK ECE+
Sbjct: 258 VDPKLKYECEE 268


>Glyma18g16100.1 
          Length = 193

 Score =  164 bits (414), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 81/122 (66%), Positives = 96/122 (78%), Gaps = 1/122 (0%)

Query: 184 KGLPPGLTPVTDSFPGGDLPEVEIIVGDTSKFGDPTTSMPKPSQEND-SEFYKPKVSTWG 242
           +GLPPGL P+++ +  G+LPEVE+IV DTSKF D TT  P+ + + D SE YKPKVSTWG
Sbjct: 3   RGLPPGLVPISEPYFDGELPEVELIVVDTSKFDDATTPEPEHTNKEDKSELYKPKVSTWG 62

Query: 243 VFPRPGNISKTFGGGRTIRPGDVLETAEERTAKDERTKQLLAAYRKKVGLNVDPKLKLEC 302
           V  RPGNISKTFGGGR I PG+VLE+ EE+  K+ RTKQLLAAY  K GLNVDPKLK EC
Sbjct: 63  VIRRPGNISKTFGGGRVICPGEVLESKEEKVVKEARTKQLLAAYNNKTGLNVDPKLKSEC 122

Query: 303 EK 304
           E+
Sbjct: 123 EE 124


>Glyma12g04370.2 
          Length = 332

 Score = 98.6 bits (244), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 133/278 (47%), Gaps = 37/278 (13%)

Query: 31  ISFSLNPSNTEPTPQNPPEFEPEPGPAHPVKLAFEKAKAYKKSTGDSKKTKLGQNLXXXX 90
           + +++ P N E +  + P+  P+ GP  PVKLAF KA+AYK+S   +  + LG       
Sbjct: 35  LCWAVGPDNAESSEPDAPKPVPD-GPVDPVKLAFSKAEAYKESIKPN--SGLG---TTQS 88

Query: 91  XXXXXXXXXXDEEVPASVKVAMENAKEYKKNKGVAGGGDVKGSARSETNSGLKGGNRENL 150
                      +++P SVK+A E AK+YK+NKGVA        A SET  G  G +  + 
Sbjct: 89  AADNNDDNEAQKDLPDSVKIATEKAKKYKQNKGVA--------AVSETTQGYLGVSDRSS 140

Query: 151 VSGLVESSASNKEKLSISSMDFMGLNFADKKRGKGLPPGLTPVTDSFPGGDLPEVEIIVG 210
              ++++ A  K +LS             ++R  G         D F   + P + +   
Sbjct: 141 GKNVMDNKAGKKGELS-------------RRRRLG-----DCHLDWFLFWN-PSLMVTCL 181

Query: 211 DTSKFGDPTTSMPKPSQENDSEFYKP---KVSTWGVFPRPGNIS-KTFGGGRTIRPGDVL 266
             S   +   S+     +N +   +      ++    P    +    F     IRPG+VL
Sbjct: 182 RWSLLLETLASLMMQRLQNLNRLIRRTRLNFTSQKFLPGVSFLDLAIFQKQYVIRPGEVL 241

Query: 267 ETAEERTAKDERTKQLLAAYRKKVGLNVDPKLKLECEK 304
           ET EE+  K+ RT+QLLAA +KKVGLNVDPKLK ECE+
Sbjct: 242 ETEEEKAVKEARTEQLLAADKKKVGLNVDPKLKYECEE 279