Jatropha Genome Database

JcCB0161221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0161221.10 - phase: 0 
         (132 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g02260.1                                                       130   4e-31
Glyma02g46300.1                                                       127   3e-30

>Glyma14g02260.1 
          Length = 457

 Score =  130 bits (327), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 69/112 (61%), Positives = 87/112 (77%), Gaps = 5/112 (4%)

Query: 8   AAQILGEIETLKATKSDIENRIAALEAKLRHLNLPNDNVSSNGSSLPVSIVDYGFGHGLS 67
           A++IL E+++LK  K+ IE++I+ALEA+LR +NL ND    N SS      +     GL+
Sbjct: 3   ASEILRELDSLKDEKTKIEHKISALEAQLREINLQNDAAPPNASSSSSYPTN-----GLT 57

Query: 68  SDMIYRYSRHLLLPSFGVQGQSNLLKSSILVVGAGGLGSPALLYLAACGVGK 119
            DMI+RYSRHL+LPSFGVQGQ+NLLKSSILVVGAGGLG+PALLY AA GVG+
Sbjct: 58  QDMIHRYSRHLVLPSFGVQGQANLLKSSILVVGAGGLGAPALLYFAASGVGR 109


>Glyma02g46300.1 
          Length = 447

 Score =  127 bits (319), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 66/112 (58%), Positives = 83/112 (74%), Gaps = 15/112 (13%)

Query: 8   AAQILGEIETLKATKSDIENRIAALEAKLRHLNLPNDNVSSNGSSLPVSIVDYGFGHGLS 67
           A++I+ E+++LK  K+ IE +I+ALEA+LR +NL ND    NG               L+
Sbjct: 3   ASEIVRELDSLKDEKTIIEQKISALEAQLREINLQNDAAPPNG---------------LT 47

Query: 68  SDMIYRYSRHLLLPSFGVQGQSNLLKSSILVVGAGGLGSPALLYLAACGVGK 119
            DMI+RYSRHL+LPSFGVQGQ+NLLKSSILVVGAGGLG+PALLY AA GVG+
Sbjct: 48  QDMIHRYSRHLVLPSFGVQGQANLLKSSILVVGAGGLGAPALLYFAASGVGR 99