Jatropha Genome Database

JcCB0159671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0159671.10 + phase: 0 /pseudo/partial
         (226 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g37170.1                                                       325   2e-89
Glyma10g30220.1                                                       324   4e-89
Glyma20g37170.2                                                       319   2e-87
Glyma18g00720.1                                                        85   5e-17
Glyma18g00720.2                                                        85   7e-17
Glyma11g36810.1                                                        83   3e-16

>Glyma20g37170.1 
          Length = 570

 Score =  325 bits (833), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 153/170 (90%), Positives = 163/170 (95%)

Query: 19  PGIKRLLPSQWRESQFFNNIYELVGVPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNL 78
           PGIKRLLPS+WRE +FFNNIYELVGVPVVTVQLRYNGWVTELQDLE+SR+L +A+GLDNL
Sbjct: 346 PGIKRLLPSKWREQEFFNNIYELVGVPVVTVQLRYNGWVTELQDLEKSRRLGKAVGLDNL 405

Query: 79  LYTPDADFSCFADLALTSPEDYYIEGQGSLLQCVLTPGDPYMPLSNDEIINRVSKQVLAL 138
           LYTPDADFSCFADLAL+SPEDYYIEGQGSLLQCVLTPGDPYMPL NDEII RV+KQVLAL
Sbjct: 406 LYTPDADFSCFADLALSSPEDYYIEGQGSLLQCVLTPGDPYMPLPNDEIIARVAKQVLAL 465

Query: 139 FPSSQGLEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSVHK 188
           FPSSQGLEV WSSVVKIGQSLYREGPGKDP+RPDQKTPVKNFFL+GS  K
Sbjct: 466 FPSSQGLEVTWSSVVKIGQSLYREGPGKDPYRPDQKTPVKNFFLAGSYTK 515


>Glyma10g30220.1 
          Length = 570

 Score =  324 bits (831), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 152/170 (89%), Positives = 163/170 (95%)

Query: 19  PGIKRLLPSQWRESQFFNNIYELVGVPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNL 78
           PGIKRLLPS+WRE +FFNNIYELVGVPVVTVQLRYNGWVTELQDLE+SR+L +A+GLDNL
Sbjct: 346 PGIKRLLPSEWREQEFFNNIYELVGVPVVTVQLRYNGWVTELQDLEKSRRLGKAVGLDNL 405

Query: 79  LYTPDADFSCFADLALTSPEDYYIEGQGSLLQCVLTPGDPYMPLSNDEIINRVSKQVLAL 138
           LYTPDADFSCFADLAL+SPEDYYIEGQGSLLQCVLTPGDPYMPL NDEII RV+KQVLAL
Sbjct: 406 LYTPDADFSCFADLALSSPEDYYIEGQGSLLQCVLTPGDPYMPLPNDEIIARVAKQVLAL 465

Query: 139 FPSSQGLEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSVHK 188
           FPSSQGLEV WSSVVKIGQSLYREGPGKDP+RPDQKTPV+NFFL+GS  K
Sbjct: 466 FPSSQGLEVTWSSVVKIGQSLYREGPGKDPYRPDQKTPVRNFFLAGSYTK 515


>Glyma20g37170.2 
          Length = 569

 Score =  319 bits (817), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 152/170 (89%), Positives = 162/170 (95%), Gaps = 1/170 (0%)

Query: 19  PGIKRLLPSQWRESQFFNNIYELVGVPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNL 78
           PGIKRLLPS+WRE +FFNNIYELVGVPVVTVQLRYNGWVTELQDLE+SR+L +A+GLDNL
Sbjct: 346 PGIKRLLPSKWREQEFFNNIYELVGVPVVTVQLRYNGWVTELQDLEKSRRLGKAVGLDNL 405

Query: 79  LYTPDADFSCFADLALTSPEDYYIEGQGSLLQCVLTPGDPYMPLSNDEIINRVSKQVLAL 138
           LYTPDADFSCFADLAL+SPEDYYIEGQGSLLQCVLTPGDPYMPL NDEII RV+KQV AL
Sbjct: 406 LYTPDADFSCFADLALSSPEDYYIEGQGSLLQCVLTPGDPYMPLPNDEIIARVAKQV-AL 464

Query: 139 FPSSQGLEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSVHK 188
           FPSSQGLEV WSSVVKIGQSLYREGPGKDP+RPDQKTPVKNFFL+GS  K
Sbjct: 465 FPSSQGLEVTWSSVVKIGQSLYREGPGKDPYRPDQKTPVKNFFLAGSYTK 514


>Glyma18g00720.1 
          Length = 570

 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 97/187 (51%), Gaps = 21/187 (11%)

Query: 21  IKRLLPSQWRESQFFNNIYELVGVPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLY 80
           +K LLP  W+   +F  + +LVGVPV+ V + ++            R+L+     D+LL+
Sbjct: 372 LKLLLPDNWKGIPYFQRLDKLVGVPVINVHIWFD------------RKLKNTY--DHLLF 417

Query: 81  TPDADFSCFADLALTSPEDYYIEGQGSLLQCVLTPGDPYMPLSNDEIINRVSKQVLALFP 140
           +     S +AD+++T  E YY   Q S+L+ V  P + ++  S+D+II     ++  LFP
Sbjct: 418 SRSPLLSVYADMSVTCKE-YYSPNQ-SMLELVFAPAEEWISRSDDDIIQATMTELAKLFP 475

Query: 141 SS-----QGLEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSVHKFLHLPDI 195
                     +++   VVK  +S+Y+  P  +P RP Q++P++ F+L+G   K  +L  +
Sbjct: 476 DEISADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPIQRSPIEGFYLAGDYTKQKYLASM 535

Query: 196 PRPAVRG 202
               + G
Sbjct: 536 EGAVLSG 542


>Glyma18g00720.2 
          Length = 430

 Score = 84.7 bits (208), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 97/187 (51%), Gaps = 21/187 (11%)

Query: 21  IKRLLPSQWRESQFFNNIYELVGVPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLY 80
           +K LLP  W+   +F  + +LVGVPV+ V + ++            R+L+     D+LL+
Sbjct: 232 LKLLLPDNWKGIPYFQRLDKLVGVPVINVHIWFD------------RKLKNTY--DHLLF 277

Query: 81  TPDADFSCFADLALTSPEDYYIEGQGSLLQCVLTPGDPYMPLSNDEIINRVSKQVLALFP 140
           +     S +AD+++T  E YY   Q S+L+ V  P + ++  S+D+II     ++  LFP
Sbjct: 278 SRSPLLSVYADMSVTCKE-YYSPNQ-SMLELVFAPAEEWISRSDDDIIQATMTELAKLFP 335

Query: 141 SS-----QGLEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSVHKFLHLPDI 195
                     +++   VVK  +S+Y+  P  +P RP Q++P++ F+L+G   K  +L  +
Sbjct: 336 DEISADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPIQRSPIEGFYLAGDYTKQKYLASM 395

Query: 196 PRPAVRG 202
               + G
Sbjct: 396 EGAVLSG 402


>Glyma11g36810.1 
          Length = 570

 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 98/187 (52%), Gaps = 21/187 (11%)

Query: 21  IKRLLPSQWRESQFFNNIYELVGVPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLY 80
           +K LLP  W+   +F  + +LVGVPV+ V + ++            R+L+     D+LL+
Sbjct: 372 LKLLLPDNWKGIPYFQRLDKLVGVPVINVHIWFD------------RKLKNTY--DHLLF 417

Query: 81  TPDADFSCFADLALTSPEDYYIEGQGSLLQCVLTPGDPYMPLSNDEIINRVSKQVLALFP 140
           +     S +AD+++T  E YY   Q S+L+ V  P + ++  S+++II     ++  LFP
Sbjct: 418 SRSPLLSVYADMSVTCKE-YYSPNQ-SMLELVFAPAEEWISRSDEDIIQATMAELAKLFP 475

Query: 141 SS-----QGLEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSVHKFLHLPDI 195
           +         +++   VVK  +S+Y+  P  +P RP Q++P++ F+L+G   K  +L  +
Sbjct: 476 NEISADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPLQRSPLEGFYLAGDYTKQKYLASM 535

Query: 196 PRPAVRG 202
               + G
Sbjct: 536 EGAVLSG 542