Jatropha Genome Database

JcCB0156721.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0156721.20 - phase: 0 
         (134 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g07900.1                                                       166   5e-42
Glyma14g07900.2                                                       165   1e-41
Glyma17g37110.1                                                       163   6e-41

>Glyma14g07900.1 
          Length = 134

 Score =  166 bits (421), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 80/124 (64%), Positives = 97/124 (78%), Gaps = 2/124 (1%)

Query: 1   MALSLTSSFLQIKXXXXXXXXXRKVKVNAGMNSNLQVTCRKKDIHPQFYEDAKVYCNGEL 60
           MA  +T++F+Q K          K +V   +     V C+KK+IHPQFYE++KVYCNGEL
Sbjct: 1   MAQCVTNTFVQGKPFLPVAAAPTKNQVRRAVQCG--VWCKKKEIHPQFYEESKVYCNGEL 58

Query: 61  VMTTGGTQKEYVVDVWSGNHPFYLGNRSAVVVDADQVEKFRKKFGELSQLMEIPVLKGEI 120
           V+TTGGTQKEYVVDVWSGNHPFYLG+RSA +V  DQVEKFRKKFGEL ++MEIPVLKGEI
Sbjct: 59  VLTTGGTQKEYVVDVWSGNHPFYLGSRSASMVSDDQVEKFRKKFGELKEIMEIPVLKGEI 118

Query: 121 VLPT 124
           V+P+
Sbjct: 119 VIPS 122


>Glyma14g07900.2 
          Length = 133

 Score =  165 bits (417), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 80/124 (64%), Positives = 95/124 (76%), Gaps = 3/124 (2%)

Query: 1   MALSLTSSFLQIKXXXXXXXXXRKVKVNAGMNSNLQVTCRKKDIHPQFYEDAKVYCNGEL 60
           MA  +T++F+Q K          K   N        V C+KK+IHPQFYE++KVYCNGEL
Sbjct: 1   MAQCVTNTFVQGKPFLPVAAAPTK---NVRRAVQCGVWCKKKEIHPQFYEESKVYCNGEL 57

Query: 61  VMTTGGTQKEYVVDVWSGNHPFYLGNRSAVVVDADQVEKFRKKFGELSQLMEIPVLKGEI 120
           V+TTGGTQKEYVVDVWSGNHPFYLG+RSA +V  DQVEKFRKKFGEL ++MEIPVLKGEI
Sbjct: 58  VLTTGGTQKEYVVDVWSGNHPFYLGSRSASMVSDDQVEKFRKKFGELKEIMEIPVLKGEI 117

Query: 121 VLPT 124
           V+P+
Sbjct: 118 VIPS 121


>Glyma17g37110.1 
          Length = 134

 Score =  163 bits (412), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 73/88 (82%), Positives = 83/88 (94%)

Query: 37  VTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHPFYLGNRSAVVVDADQ 96
           V CRKK+IHPQF+E+AKVYCNGELV+TTGGTQKEYVVDVWSGNHPFYLG+RSA +V  DQ
Sbjct: 35  VWCRKKEIHPQFHEEAKVYCNGELVLTTGGTQKEYVVDVWSGNHPFYLGSRSASMVSDDQ 94

Query: 97  VEKFRKKFGELSQLMEIPVLKGEIVLPT 124
           VEKFRKKFGEL ++MEIPVLKGEIV+P+
Sbjct: 95  VEKFRKKFGELKEIMEIPVLKGEIVIPS 122