Jatropha Genome Database

JcCB0156231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0156231.10 + phase: 0 /partial
         (104 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g26570.1                                                       169   6e-43
Glyma06g09480.1                                                       152   6e-38
Glyma08g08190.1                                                       145   1e-35
Glyma08g08190.3                                                       145   1e-35
Glyma08g08190.2                                                       145   1e-35
Glyma15g05480.1                                                       142   9e-35
Glyma08g19570.1                                                       140   3e-34
Glyma07g29050.1                                                       118   2e-27
Glyma04g09320.1                                                        89   1e-18
Glyma14g33370.1                                                        52   1e-07

>Glyma17g26570.1 
          Length = 779

 Score =  169 bits (428), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 76/104 (73%), Positives = 90/104 (86%)

Query: 1   MWDTVQQIAIYIHRFHNLDLFQQGFYQIKVTMRWEDSEYASIGTPARVVQYEAHDMDSDS 60
           M++ VQ+IAIYIHRFHNLDLFQQG+YQIK+TMRWED E  S G PARVVQYEA D+   S
Sbjct: 12  MFEAVQEIAIYIHRFHNLDLFQQGWYQIKITMRWEDDEDVSFGIPARVVQYEARDLGPSS 71

Query: 61  IYGAWRINDTDNSFLTQPFRIKYARQDVYLSVMISFDLSLSKYK 104
           IYG WRI+DTDNSF TQPFRIKYARQD++L +MISF+LSL +++
Sbjct: 72  IYGIWRIDDTDNSFSTQPFRIKYARQDIHLCMMISFNLSLGRFE 115


>Glyma06g09480.1 
          Length = 828

 Score =  152 bits (385), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 70/101 (69%), Positives = 85/101 (84%)

Query: 3   DTVQQIAIYIHRFHNLDLFQQGFYQIKVTMRWEDSEYASIGTPARVVQYEAHDMDSDSIY 62
           +TV++I +YI RFHNLDLF+QG+Y+IK+T+RWEDSE  S G PA VVQYEA DMD  SIY
Sbjct: 14  ETVREIGVYIQRFHNLDLFKQGWYRIKITVRWEDSENMSFGIPASVVQYEAPDMDPSSIY 73

Query: 63  GAWRINDTDNSFLTQPFRIKYARQDVYLSVMISFDLSLSKY 103
           G WRI+DTDNSF TQ FRIKYARQDV+L +MI F+LS S++
Sbjct: 74  GVWRIDDTDNSFSTQSFRIKYARQDVHLYMMIVFNLSCSEF 114


>Glyma08g08190.1 
          Length = 777

 Score =  145 bits (366), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 67/102 (65%), Positives = 82/102 (80%)

Query: 3   DTVQQIAIYIHRFHNLDLFQQGFYQIKVTMRWEDSEYASIGTPARVVQYEAHDMDSDSIY 62
           D V ++AIYIHRFHNLDLF+QG+Y+IKVTMRWED E +  G PARVVQYEA ++ SD++ 
Sbjct: 41  DAVHEVAIYIHRFHNLDLFEQGWYKIKVTMRWEDGEGSYPGIPARVVQYEAPEVGSDNLC 100

Query: 63  GAWRINDTDNSFLTQPFRIKYARQDVYLSVMISFDLSLSKYK 104
             W I+DTDNSF T PF IKYARQDV+LS+MISF LS  + +
Sbjct: 101 RVWMIDDTDNSFSTPPFHIKYARQDVFLSIMISFYLSFGECE 142


>Glyma08g08190.3 
          Length = 743

 Score =  145 bits (365), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 67/102 (65%), Positives = 82/102 (80%)

Query: 3   DTVQQIAIYIHRFHNLDLFQQGFYQIKVTMRWEDSEYASIGTPARVVQYEAHDMDSDSIY 62
           D V ++AIYIHRFHNLDLF+QG+Y+IKVTMRWED E +  G PARVVQYEA ++ SD++ 
Sbjct: 41  DAVHEVAIYIHRFHNLDLFEQGWYKIKVTMRWEDGEGSYPGIPARVVQYEAPEVGSDNLC 100

Query: 63  GAWRINDTDNSFLTQPFRIKYARQDVYLSVMISFDLSLSKYK 104
             W I+DTDNSF T PF IKYARQDV+LS+MISF LS  + +
Sbjct: 101 RVWMIDDTDNSFSTPPFHIKYARQDVFLSIMISFYLSFGECE 142


>Glyma08g08190.2 
          Length = 760

 Score =  145 bits (365), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 67/102 (65%), Positives = 82/102 (80%)

Query: 3   DTVQQIAIYIHRFHNLDLFQQGFYQIKVTMRWEDSEYASIGTPARVVQYEAHDMDSDSIY 62
           D V ++AIYIHRFHNLDLF+QG+Y+IKVTMRWED E +  G PARVVQYEA ++ SD++ 
Sbjct: 41  DAVHEVAIYIHRFHNLDLFEQGWYKIKVTMRWEDGEGSYPGIPARVVQYEAPEVGSDNLC 100

Query: 63  GAWRINDTDNSFLTQPFRIKYARQDVYLSVMISFDLSLSKYK 104
             W I+DTDNSF T PF IKYARQDV+LS+MISF LS  + +
Sbjct: 101 RVWMIDDTDNSFSTPPFHIKYARQDVFLSIMISFYLSFGECE 142


>Glyma15g05480.1 
          Length = 750

 Score =  142 bits (357), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 64/104 (61%), Positives = 83/104 (79%)

Query: 1   MWDTVQQIAIYIHRFHNLDLFQQGFYQIKVTMRWEDSEYASIGTPARVVQYEAHDMDSDS 60
           M D V ++A+YIHRFHNLDLF+QG+Y+IKVT+RWED E +  G PARVVQYEA ++ +D+
Sbjct: 38  MLDAVHEVAVYIHRFHNLDLFEQGWYRIKVTLRWEDGEDSYPGIPARVVQYEAPEVGADN 97

Query: 61  IYGAWRINDTDNSFLTQPFRIKYARQDVYLSVMISFDLSLSKYK 104
           + G W I+D DNSF T  FRI+YARQDV+L++MISF LS   Y+
Sbjct: 98  LCGVWMIDDKDNSFSTPSFRIRYARQDVFLAIMISFYLSYGGYE 141


>Glyma08g19570.1 
          Length = 777

 Score =  140 bits (353), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 62/104 (59%), Positives = 83/104 (79%)

Query: 1   MWDTVQQIAIYIHRFHNLDLFQQGFYQIKVTMRWEDSEYASIGTPARVVQYEAHDMDSDS 60
           M D V ++A+YIHRFHNLDLF+QG+Y+IK+T+RWED + +  G PARVVQYEA ++ +D+
Sbjct: 38  MLDAVHEVAVYIHRFHNLDLFEQGWYRIKITLRWEDGDDSHPGVPARVVQYEAPEVGADN 97

Query: 61  IYGAWRINDTDNSFLTQPFRIKYARQDVYLSVMISFDLSLSKYK 104
           + G W I+D DNSF T  FRI+YARQDV L++MISF LS  +Y+
Sbjct: 98  LCGVWMIDDKDNSFSTPSFRIRYARQDVILAIMISFYLSYGRYE 141


>Glyma07g29050.1 
          Length = 165

 Score =  118 bits (295), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 56/106 (52%), Positives = 78/106 (73%), Gaps = 2/106 (1%)

Query: 1   MWDTVQQIAIYIHRFHNLDLFQQGFYQIKVTMRWEDSEYASIGTPARVVQYE--AHDMDS 58
           + D V ++A+YIHRFHNL+LF+QG+Y+IK+T+RWED + +  G  A V QYE  A  + +
Sbjct: 38  ILDVVHEVAVYIHRFHNLNLFEQGWYRIKITLRWEDGDDSHPGVLAGVAQYEGAAPKVGA 97

Query: 59  DSIYGAWRINDTDNSFLTQPFRIKYARQDVYLSVMISFDLSLSKYK 104
           D++ G   I+D DNSF T  FRI+YARQDV L++MISF +S  +YK
Sbjct: 98  DNLCGVLMIDDKDNSFSTSSFRIRYARQDVILAIMISFYVSYGRYK 143


>Glyma04g09320.1 
          Length = 373

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 58/101 (57%), Gaps = 36/101 (35%)

Query: 3   DTVQQIAIYIHRFHNLDLFQQGFYQIKVTMRWEDSEYASIGTPARVVQYEAHDMDSDSIY 62
           +TVQ+I +YIHRFHNLDLF+QG                                    +Y
Sbjct: 14  ETVQEIGVYIHRFHNLDLFKQG------------------------------------VY 37

Query: 63  GAWRINDTDNSFLTQPFRIKYARQDVYLSVMISFDLSLSKY 103
           G WRI+DTDNSF TQ FRIKYARQDV+L +MI F+LS S++
Sbjct: 38  GVWRIDDTDNSFSTQSFRIKYARQDVHLYMMIVFNLSRSEF 78


>Glyma14g33370.1 
          Length = 134

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 36/50 (72%)

Query: 55  DMDSDSIYGAWRINDTDNSFLTQPFRIKYARQDVYLSVMISFDLSLSKYK 104
           ++ +D++     I+D DNSF T  FRI+YARQDV L++MISF +S  +Y+
Sbjct: 51  EVGADNLCEVLMIDDKDNSFSTPSFRIRYARQDVILAIMISFYVSYGRYE 100