Jatropha Genome Database

JcCB0155891.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0155891.20 - phase: 2 /TE/partial
         (371 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g31910.1                                                        55   2e-07
Glyma13g38580.1                                                        55   2e-07

>Glyma12g31910.1 
          Length = 926

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/30 (80%), Positives = 29/30 (96%)

Query: 293 RIVRFIIEDTVEERILQLQEKKELVFEGLV 322
           RIVRF+IE+T+EERIL+LQEKKELVFEG +
Sbjct: 876 RIVRFVIENTIEERILKLQEKKELVFEGTI 905


>Glyma13g38580.1 
          Length = 851

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/30 (80%), Positives = 29/30 (96%)

Query: 293 RIVRFIIEDTVEERILQLQEKKELVFEGLV 322
           RIVRF+IE+T+EERIL+LQEKKELVFEG +
Sbjct: 801 RIVRFVIENTIEERILKLQEKKELVFEGTI 830