Jatropha Genome Database

JcCB0155891.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0155891.10 + phase: 2 /pseudo/partial
         (98 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g46200.1                                                       151   1e-37
Glyma14g02530.2                                                       150   3e-37
Glyma14g02530.1                                                       150   3e-37
Glyma14g02530.3                                                       150   3e-37
Glyma07g37540.1                                                        49   2e-06
Glyma17g03110.1                                                        47   3e-06

>Glyma02g46200.1 
          Length = 464

 Score =  151 bits (382), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 71/79 (89%), Positives = 76/79 (96%)

Query: 20  GVYGSLLSTPIINPPQSAILGMHSIVSRPMVVDGNVVPRPMMYIALTYDHRLIDGREAVF 79
           GVYGSLLSTPIINPPQSAILGMHSIVSRP VV GN+VPRPMMY+ALTYDHR+IDGREAVF
Sbjct: 386 GVYGSLLSTPIINPPQSAILGMHSIVSRPTVVGGNIVPRPMMYVALTYDHRIIDGREAVF 445

Query: 80  FLRRIKDVVEDTRRLLLDV 98
           FLRRIKD+VED RRLLLD+
Sbjct: 446 FLRRIKDIVEDPRRLLLDI 464


>Glyma14g02530.2 
          Length = 461

 Score =  150 bits (379), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 70/79 (88%), Positives = 76/79 (96%)

Query: 20  GVYGSLLSTPIINPPQSAILGMHSIVSRPMVVDGNVVPRPMMYIALTYDHRLIDGREAVF 79
           GVYGSLLSTPIINPPQSAILGMHSIVSRP VV GN+VPRP+MY+ALTYDHR+IDGREAVF
Sbjct: 383 GVYGSLLSTPIINPPQSAILGMHSIVSRPTVVGGNIVPRPLMYVALTYDHRIIDGREAVF 442

Query: 80  FLRRIKDVVEDTRRLLLDV 98
           FLRRIKD+VED RRLLLD+
Sbjct: 443 FLRRIKDIVEDPRRLLLDI 461


>Glyma14g02530.1 
          Length = 464

 Score =  150 bits (379), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 70/79 (88%), Positives = 76/79 (96%)

Query: 20  GVYGSLLSTPIINPPQSAILGMHSIVSRPMVVDGNVVPRPMMYIALTYDHRLIDGREAVF 79
           GVYGSLLSTPIINPPQSAILGMHSIVSRP VV GN+VPRP+MY+ALTYDHR+IDGREAVF
Sbjct: 386 GVYGSLLSTPIINPPQSAILGMHSIVSRPTVVGGNIVPRPLMYVALTYDHRIIDGREAVF 445

Query: 80  FLRRIKDVVEDTRRLLLDV 98
           FLRRIKD+VED RRLLLD+
Sbjct: 446 FLRRIKDIVEDPRRLLLDI 464


>Glyma14g02530.3 
          Length = 463

 Score =  150 bits (379), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 70/79 (88%), Positives = 76/79 (96%)

Query: 20  GVYGSLLSTPIINPPQSAILGMHSIVSRPMVVDGNVVPRPMMYIALTYDHRLIDGREAVF 79
           GVYGSLLSTPIINPPQSAILGMHSIVSRP VV GN+VPRP+MY+ALTYDHR+IDGREAVF
Sbjct: 385 GVYGSLLSTPIINPPQSAILGMHSIVSRPTVVGGNIVPRPLMYVALTYDHRIIDGREAVF 444

Query: 80  FLRRIKDVVEDTRRLLLDV 98
           FLRRIKD+VED RRLLLD+
Sbjct: 445 FLRRIKDIVEDPRRLLLDI 463


>Glyma07g37540.1 
          Length = 515

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)

Query: 19  VGVYGSLLSTPIINPPQSAILGMHSIVSRPMVVD-GNVVPRPMMYIALTYDHRLIDGREA 77
           +G  G    +P+IN P+ +I+ +  I   P   D GNV P  +M + +  DHR++DG   
Sbjct: 434 IGAIGGKFGSPLINLPEVSIIAIGRIQIVPRFADNGNVYPASLMNVNIGADHRVLDGATV 493

Query: 78  VFFLRRIKDVVEDTRRLLL 96
             F    K ++E+   L L
Sbjct: 494 ARFCNEWKQLIENPELLTL 512


>Glyma17g03110.1 
          Length = 515

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)

Query: 19  VGVYGSLLSTPIINPPQSAILGMHSIVSRPMVVD-GNVVPRPMMYIALTYDHRLIDGREA 77
           +G  G    +P+IN P+ +I+ +  I   P   D GNV P  ++ + +  DHR++DG   
Sbjct: 434 IGAIGGKFGSPLINLPEVSIIAVGRIQKVPRFADNGNVYPASLVNVNIGADHRVLDGATV 493

Query: 78  VFFLRRIKDVVEDTRRLLL 96
             F    K ++E+   L L
Sbjct: 494 ARFCNEWKQLIENPELLTL 512