Jatropha Genome Database

JcCB0155101.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0155101.10 + phase: 0 /partial/short
         (30 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g02980.1                                                        62   2e-10
Glyma05g02940.1                                                        61   2e-10
Glyma17g13640.1                                                        61   3e-10

>Glyma05g02980.1 
          Length = 384

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/30 (100%), Positives = 30/30 (100%)

Query: 1   PDAKNALYQATIKQGDFLLNRIQKLSRVID 30
           PDAKNALYQATIKQGDFLLNRIQKLSRVID
Sbjct: 354 PDAKNALYQATIKQGDFLLNRIQKLSRVID 383


>Glyma05g02940.1 
          Length = 386

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/30 (100%), Positives = 30/30 (100%)

Query: 1   PDAKNALYQATIKQGDFLLNRIQKLSRVID 30
           PDAKNALYQATIKQGDFLLNRIQKLSRVID
Sbjct: 356 PDAKNALYQATIKQGDFLLNRIQKLSRVID 385


>Glyma17g13640.1 
          Length = 386

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/30 (100%), Positives = 30/30 (100%)

Query: 1   PDAKNALYQATIKQGDFLLNRIQKLSRVID 30
           PDAKNALYQATIKQGDFLLNRIQKLSRVID
Sbjct: 356 PDAKNALYQATIKQGDFLLNRIQKLSRVID 385