Jatropha Genome Database

JcCB0150901.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0150901.10 + phase: 0 /pseudo/partial
         (257 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g20020.1                                                       273   1e-73
Glyma11g05960.1                                                       268   6e-72
Glyma01g39310.1                                                       135   5e-32
Glyma09g00260.2                                                        57   3e-08
Glyma09g00260.1                                                        57   3e-08

>Glyma17g20020.1 
          Length = 669

 Score =  273 bits (699), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 130/176 (73%), Positives = 147/176 (83%)

Query: 65  EQSIESGTPIDIVSSLKSYERARRLRVAIIHGMARMAAIMASTYKAYLGVGLGPLSFLTK 124
           EQSI+SG+PIDI SSL+SYER RRLRVAIIHGMARMAA+MASTYKAYLGVGLGPL FLTK
Sbjct: 411 EQSIKSGSPIDIDSSLRSYERERRLRVAIIHGMARMAALMASTYKAYLGVGLGPLEFLTK 470

Query: 125 YRIPHPGRVGGRFFIDIAMPVMLSWVLGGNSSKLEGRSQCCRLSDKASDQLRTWFEDDDA 184
           +RIPHPGRVGGRFF+DI MP MLSWVLGGNS KLEGR   CRL+DKA+DQLR WFEDD+A
Sbjct: 471 FRIPHPGRVGGRFFVDIMMPSMLSWVLGGNSDKLEGRPLSCRLTDKANDQLRRWFEDDEA 530

Query: 185 LERALNAEWFLLPLGNKVVVSEPICLSRNENTPCVVGKVSHKDFPGMSIVIPSPQV 240
           LERA+N EW LLP G+   +S+PI LSRNE  P ++G    +D  G S+ I SPQV
Sbjct: 531 LERAINGEWILLPHGDGTGLSKPISLSRNEMKPFIIGSAPMQDNSGSSVTISSPQV 586


>Glyma11g05960.1 
          Length = 654

 Score =  268 bits (684), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 131/176 (74%), Positives = 153/176 (86%)

Query: 65  EQSIESGTPIDIVSSLKSYERARRLRVAIIHGMARMAAIMASTYKAYLGVGLGPLSFLTK 124
           +QSI+SG+PIDI SSLKSYER RRLRVAI+HGMARMAA+MASTYKAYLGVGLGPL FLTK
Sbjct: 396 QQSIKSGSPIDIDSSLKSYERERRLRVAIVHGMARMAAMMASTYKAYLGVGLGPLEFLTK 455

Query: 125 YRIPHPGRVGGRFFIDIAMPVMLSWVLGGNSSKLEGRSQCCRLSDKASDQLRTWFEDDDA 184
           +RIPHPGRVGGRFFID  MP+ML+WVLGGNSSKLEGR  CCRLSDKA+DQL  WFED+DA
Sbjct: 456 FRIPHPGRVGGRFFIDKMMPLMLNWVLGGNSSKLEGRPVCCRLSDKANDQLHRWFEDNDA 515

Query: 185 LERALNAEWFLLPLGNKVVVSEPICLSRNENTPCVVGKVSHKDFPGMSIVIPSPQV 240
           LERA+N EW LLP G++   ++PICL+++E  PC++G +  KD PG SI+IP PQV
Sbjct: 516 LERAINGEWILLPCGDEAGPTKPICLTQDEMKPCIIGSMQQKDHPGSSIIIPLPQV 571


>Glyma01g39310.1 
          Length = 564

 Score =  135 bits (340), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 71/92 (77%), Positives = 84/92 (91%)

Query: 65  EQSIESGTPIDIVSSLKSYERARRLRVAIIHGMARMAAIMASTYKAYLGVGLGPLSFLTK 124
           ++SI+SG+PIDI SSLKSYER RRLRVAI+HGMARMAA+MASTYKAYLGVGLGPL FLTK
Sbjct: 395 QRSIKSGSPIDIDSSLKSYERERRLRVAIVHGMARMAAMMASTYKAYLGVGLGPLEFLTK 454

Query: 125 YRIPHPGRVGGRFFIDIAMPVMLSWVLGGNSS 156
           + IPHPGRVGGRFF D  +P+ML+W+LGG ++
Sbjct: 455 FWIPHPGRVGGRFFTDKMIPLMLNWILGGVTA 486


>Glyma09g00260.2 
          Length = 477

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 45/80 (56%)

Query: 75  DIVSSLKSYERARRLRVAIIHGMARMAAIMASTYKAYLGVGLGPLSFLTKYRIPHPGRVG 134
           +++S+L+ YE+ R  RV ++H  +RMA+ M   Y+ Y+     PLS +T  +I HPG   
Sbjct: 395 EVISALRRYEKKRIPRVRVLHTASRMASQMLVNYRPYIEFKFWPLSNVTTMQIKHPGIHV 454

Query: 135 GRFFIDIAMPVMLSWVLGGN 154
            +       P  ++W++ G+
Sbjct: 455 AQALFKFTFPQFVTWMIAGH 474


>Glyma09g00260.1 
          Length = 478

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 45/80 (56%)

Query: 75  DIVSSLKSYERARRLRVAIIHGMARMAAIMASTYKAYLGVGLGPLSFLTKYRIPHPGRVG 134
           +++S+L+ YE+ R  RV ++H  +RMA+ M   Y+ Y+     PLS +T  +I HPG   
Sbjct: 396 EVISALRRYEKKRIPRVRVLHTASRMASQMLVNYRPYIEFKFWPLSNVTTMQIKHPGIHV 455

Query: 135 GRFFIDIAMPVMLSWVLGGN 154
            +       P  ++W++ G+
Sbjct: 456 AQALFKFTFPQFVTWMIAGH 475