Jatropha Genome Database

JcCB0149161.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0149161.10 + phase: 0 /pseudo/partial
         (226 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g10190.1                                                       118   4e-27
Glyma02g37840.1                                                       110   1e-24
Glyma06g10170.1                                                       101   5e-22

>Glyma04g10190.1 
          Length = 336

 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 97/164 (59%), Gaps = 25/164 (15%)

Query: 76  DLEYELDVFPDVSTEASTEAAACVK----VLIASGLPSDSTHPN---------------- 115
           DLE EL+ FP VS E ++EAAACVK    V+    L SD                     
Sbjct: 91  DLECELEAFPPVSVECASEAAACVKSCCMVVNVRHLSSDEQKNKCSESENEYSERKDGIW 150

Query: 116 --STTVEAPLTINIPNGKPCRFTSENLQPA-IMKGVNITVPVSVQKQPLPAVTSAEGLDA 172
             ++T+EAPLTIN+P     R   EN QP+ +M+G +I  PV+VQ+Q LP ++S +G++ 
Sbjct: 151 NATSTIEAPLTINVPVCHSSRTPIENSQPSNLMQGTSIIFPVTVQRQTLPTISSTDGIET 210

Query: 173 NG--SGSGVPRRKRKPWSDSEDLELIAAVQKYGEGNWANILRSE 214
            G   G+   +RKRK WS+ ED++L AAVQ++GEGNWA + + +
Sbjct: 211 KGIVGGNMASKRKRKAWSEEEDMQLRAAVQRWGEGNWATMAKGD 254


>Glyma02g37840.1 
          Length = 207

 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 93/145 (64%), Gaps = 6/145 (4%)

Query: 75  CDLEYELDVFPDVSTEASTEAAACVKVLIASGLPSDSTHPNSTTVEAPLTINIPNGKPCR 134
            DLE E +  P  + E + EA+ACV+V++ S   ++ST P S+ ++APLTIN+P  +  R
Sbjct: 57  SDLECEREALPRPNKEIAAEASACVQVMMTSFKLNEST-PTSSVIQAPLTINVPVFRSSR 115

Query: 135 FTSENLQPAIMKGV---NITVPVSVQKQPLPAVTSAEGLDANGSGSGVP--RRKRKPWSD 189
             +     +   G+   NI  PV+V++Q LP V S   ++  GSGSG    ++KR+PWS+
Sbjct: 116 IANMESSQSSSSGMQETNIVFPVTVKRQALPNVPSTRAVETRGSGSGYTSMKKKREPWSE 175

Query: 190 SEDLELIAAVQKYGEGNWANILRSE 214
            EDL+L AAV+++GEGNWA + +S+
Sbjct: 176 EEDLQLRAAVRRWGEGNWATMAKSD 200


>Glyma06g10170.1 
          Length = 613

 Score =  101 bits (252), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 96/162 (59%), Gaps = 10/162 (6%)

Query: 75  CDLEYELDVFPDVSTEASTEAAACVKVLIASGLPSDSTHPNSTTVEAPLTINI-----PN 129
            DLE EL+  P VS E ++EAAACVK++  S     S + N       L  N       +
Sbjct: 90  SDLECELEALPPVSLECASEAAACVKMIPCSEEQLSSLYGNWNNCVFFLLFNFDQPVYSS 149

Query: 130 GKPCRFTS-ENLQPA-IMKGVNITVPVSVQKQPLPAVTSAEGLDANG--SGSGVPRRKRK 185
           G  C  T  EN QP+ +M+G +   PV+VQ+Q LP ++S +G++  G   G+   +RKRK
Sbjct: 150 GNDCFSTRIENSQPSNLMQGTSFIFPVTVQRQTLPTISSTDGIETKGIVGGNMASKRKRK 209

Query: 186 PWSDSEDLELIAAVQKYGEGNWANILR-SEVKWDRTASQLSQ 226
            WS+ ED++L AAVQ++GEGNWA + +  +    R+A+QL+Q
Sbjct: 210 AWSEEEDMQLRAAVQRWGEGNWATMAKGDDFPIKRSATQLAQ 251