Jatropha Genome Database

JcCB0147481.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0147481.10 + phase: 0 /partial
         (261 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g23150.1                                                       300   1e-81
Glyma02g05070.1                                                       286   2e-77

>Glyma16g23150.1 
          Length = 706

 Score =  300 bits (768), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 143/262 (54%), Positives = 181/262 (69%), Gaps = 1/262 (0%)

Query: 1   AGDLYVVLSSFLPKRGAIKSVAVYPSEFGLERMKEEELHGPVGLFXXXXXXXXXXXXXXX 60
           A DLYV+LSSF+P  G IKSV VYPSEFGL+RMKEEE+HGP+GLF               
Sbjct: 205 AVDLYVLLSSFVPPNGLIKSVTVYPSEFGLQRMKEEEVHGPIGLFDDEDEKNDEDSSNDD 264

Query: 61  XXXXXLRAYEKSRLRYFYAVVECDSIATAEHLYKACDGVEFERSSNVLDLRFVPDSMEFK 120
                LRAYEKSR+RY++AVVECDS ATA ++YK CDG+E ++SSN LDLRF+PD+MEFK
Sbjct: 265 IDNEKLRAYEKSRMRYYFAVVECDSSATANYIYKECDGLELKQSSNALDLRFIPDNMEFK 324

Query: 121 HPPRDIAEEAPTNYDGLDFHTKALQHSNIAISWDEDEPQRVKTLKRKFNADQLADLELKE 180
           HPPRD+A E P NY+  DF+++ALQHS + ++WD+DEP R KTLK+KF  DQLA +E+KE
Sbjct: 325 HPPRDVATEVPANYECKDFYSRALQHSEVNLTWDDDEPLRAKTLKQKFTDDQLAQMEVKE 384

Query: 181 FLAXXXXXXXXXXXXXVAEGEVDKKIKKRDKYRALIXX-XXXXXXXXXXXXXXMEITFHT 239
           FL                + + DK+ KKR KYRAL+                 ME+TF+T
Sbjct: 385 FLTSDESESDDSKDNNETDDQPDKRAKKRAKYRALLQAGDDSDGGNEHDNVQNMEVTFNT 444

Query: 240 GLEGLSKRLLERKDKKSESVWE 261
           GLE LSK ++E+KDKKSE+VW+
Sbjct: 445 GLEDLSKHIMEKKDKKSETVWD 466


>Glyma02g05070.1 
          Length = 626

 Score =  286 bits (731), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 140/262 (53%), Positives = 177/262 (67%), Gaps = 7/262 (2%)

Query: 1   AGDLYVVLSSFLPKRGAIKSVAVYPSEFGLERMKEEELHGPVGLFXXXXXXXXXXXXXXX 60
           A DLYV+LSSF+P  G IKSV VYPSEFGL+RMKEEE+ GP+GLF               
Sbjct: 128 AVDLYVLLSSFVPPNGLIKSVRVYPSEFGLQRMKEEEVRGPIGLFDDEDSSNDDLDNEK- 186

Query: 61  XXXXXLRAYEKSRLRYFYAVVECDSIATAEHLYKACDGVEFERSSNVLDLRFVPDSMEFK 120
                LRAYEKSR+RY++AVVECDS ATA ++YK CDG+E ++SSN LDLRF+PD+MEFK
Sbjct: 187 -----LRAYEKSRMRYYFAVVECDSSATANYIYKECDGLELKQSSNALDLRFIPDNMEFK 241

Query: 121 HPPRDIAEEAPTNYDGLDFHTKALQHSNIAISWDEDEPQRVKTLKRKFNADQLADLELKE 180
           HPPRD+A E P NY+  DF+++ALQHS + ++WD+DEP R KTL RK   +QLA+ E+KE
Sbjct: 242 HPPRDVATEVPANYECKDFYSRALQHSEVNLTWDDDEPLRAKTLNRKLTDEQLAEFEVKE 301

Query: 181 FLAXXXXXXXXXXXXXVAEGEVDKKIKKRDKYRALIXX-XXXXXXXXXXXXXXMEITFHT 239
           FL                + + DK  KKR KYRAL+                 ME+TF+T
Sbjct: 302 FLTSDESESDDSKDNNETDDQPDKMAKKRAKYRALLQSGDDSDGGNEHDNAQNMEVTFNT 361

Query: 240 GLEGLSKRLLERKDKKSESVWE 261
           GLE LSK ++E+KDKKSE+VW+
Sbjct: 362 GLEDLSKYIMEKKDKKSETVWD 383