Jatropha Genome Database

JcCB0147231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0147231.10 + phase: 1 /partial
         (274 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g32270.3                                                       293   1e-79
Glyma16g32270.1                                                       293   2e-79
Glyma16g32270.2                                                       246   1e-65
Glyma09g27010.1                                                       169   3e-42
Glyma09g26980.1                                                       167   1e-41

>Glyma16g32270.3 
          Length = 287

 Score =  293 bits (750), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 141/227 (62%), Positives = 176/227 (77%), Gaps = 1/227 (0%)

Query: 49  LNLSILRFTFGIPGLDESYLPRWIGYGFGSLLLLNHFLGSNSA-ASPPQLRTEALGISLA 107
           LNLS+LRFT GIPGLDESYLPRWIGYGFGSLLLLNHFLGS+SA  +P QL TE LG+SLA
Sbjct: 48  LNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLSTEVLGLSLA 107

Query: 108 AFSIALPFFGRFLKGVRPMDQAALPGGAEQIFLMSENIFDTQKEDLAWATYVLLRNTNTI 167
           +FSI LP+ G+FLKG +P+D+  +P G EQIF+MS +  D  KEDLAWA+YVLL NTN I
Sbjct: 108 SFSIVLPYLGKFLKGAQPVDEKTIPDGTEQIFVMSTDRVDGLKEDLAWASYVLLCNTNAI 167

Query: 168 AVLISIQGGLCVRGYWKTPDNLSKAQLLDWFLKQIDSIGLFDLRDTLYFPQTAESGLWEM 227
           A+LI IQG +C RGYW  PD+ SK  L  WF K+I++ GL+DL+DTLYFPQ A+S   ++
Sbjct: 168 AMLIFIQGEICARGYWNIPDDTSKEILPGWFKKKIENAGLYDLKDTLYFPQDADSEFQDL 227

Query: 228 LPKGTRSLLVEPVHQARAKSANEMGKNEGFVLLASSMEYAYGDKDRA 274
           +P GTR LL++PV Q   +S   + K  GF+LLAS+  YA+ +KD+A
Sbjct: 228 VPIGTRCLLIQPVLQVSNESDTGLQKPGGFILLASTTRYAFSNKDKA 274


>Glyma16g32270.1 
          Length = 289

 Score =  293 bits (750), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 141/227 (62%), Positives = 176/227 (77%), Gaps = 1/227 (0%)

Query: 49  LNLSILRFTFGIPGLDESYLPRWIGYGFGSLLLLNHFLGSNSA-ASPPQLRTEALGISLA 107
           LNLS+LRFT GIPGLDESYLPRWIGYGFGSLLLLNHFLGS+SA  +P QL TE LG+SLA
Sbjct: 48  LNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLSTEVLGLSLA 107

Query: 108 AFSIALPFFGRFLKGVRPMDQAALPGGAEQIFLMSENIFDTQKEDLAWATYVLLRNTNTI 167
           +FSI LP+ G+FLKG +P+D+  +P G EQIF+MS +  D  KEDLAWA+YVLL NTN I
Sbjct: 108 SFSIVLPYLGKFLKGAQPVDEKTIPDGTEQIFVMSTDRVDGLKEDLAWASYVLLCNTNAI 167

Query: 168 AVLISIQGGLCVRGYWKTPDNLSKAQLLDWFLKQIDSIGLFDLRDTLYFPQTAESGLWEM 227
           A+LI IQG +C RGYW  PD+ SK  L  WF K+I++ GL+DL+DTLYFPQ A+S   ++
Sbjct: 168 AMLIFIQGEICARGYWNIPDDTSKEILPGWFKKKIENAGLYDLKDTLYFPQDADSEFQDL 227

Query: 228 LPKGTRSLLVEPVHQARAKSANEMGKNEGFVLLASSMEYAYGDKDRA 274
           +P GTR LL++PV Q   +S   + K  GF+LLAS+  YA+ +KD+A
Sbjct: 228 VPIGTRCLLIQPVLQVSNESDTGLQKPGGFILLASTTRYAFSNKDKA 274


>Glyma16g32270.2 
          Length = 263

 Score =  246 bits (629), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 125/227 (55%), Positives = 156/227 (68%), Gaps = 25/227 (11%)

Query: 49  LNLSILRFTFGIPGLDESYLPRWIGYGFGSLLLLNHFLGSNSA-ASPPQLRTEALGISLA 107
           LNLS+LRFT GIPGLDESYLPRWIGYGFGSLLLLNHFLGS+SA  +P QL          
Sbjct: 48  LNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQL---------- 97

Query: 108 AFSIALPFFGRFLKGVRPMDQAALPGGAEQIFLMSENIFDTQKEDLAWATYVLLRNTNTI 167
                         G +P+D+  +P G EQIF+MS +  D  KEDLAWA+YVLL NTN I
Sbjct: 98  --------------GAQPVDEKTIPDGTEQIFVMSTDRVDGLKEDLAWASYVLLCNTNAI 143

Query: 168 AVLISIQGGLCVRGYWKTPDNLSKAQLLDWFLKQIDSIGLFDLRDTLYFPQTAESGLWEM 227
           A+LI IQG +C RGYW  PD+ SK  L  WF K+I++ GL+DL+DTLYFPQ A+S   ++
Sbjct: 144 AMLIFIQGEICARGYWNIPDDTSKEILPGWFKKKIENAGLYDLKDTLYFPQDADSEFQDL 203

Query: 228 LPKGTRSLLVEPVHQARAKSANEMGKNEGFVLLASSMEYAYGDKDRA 274
           +P GTR LL++PV Q   +S   + K  GF+LLAS+  YA+ +KD+A
Sbjct: 204 VPIGTRCLLIQPVLQVSNESDTGLQKPGGFILLASTTRYAFSNKDKA 250


>Glyma09g27010.1 
          Length = 115

 Score =  169 bits (428), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 81/115 (70%), Positives = 93/115 (80%), Gaps = 1/115 (0%)

Query: 56  FTFGIPGLDESYLPRWIGYGFGSLLLLNHFLGSNSA-ASPPQLRTEALGISLAAFSIALP 114
           F  GI GLDESYLPRWIGYGFGSLLLLNHFLGS+SA  +P QL TE LG+SLA+FSI LP
Sbjct: 1   FATGILGLDESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLSTEVLGLSLASFSIVLP 60

Query: 115 FFGRFLKGVRPMDQAALPGGAEQIFLMSENIFDTQKEDLAWATYVLLRNTNTIAV 169
           + G+FLKG +PMD+  +P   EQIF MS +I D  KEDLAWA+YVLLRNTN IA+
Sbjct: 61  YLGKFLKGAQPMDEKTIPDDTEQIFFMSTDIVDCLKEDLAWASYVLLRNTNVIAM 115


>Glyma09g26980.1 
          Length = 115

 Score =  167 bits (423), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 79/115 (68%), Positives = 93/115 (80%), Gaps = 1/115 (0%)

Query: 56  FTFGIPGLDESYLPRWIGYGFGSLLLLNHFLGSNSA-ASPPQLRTEALGISLAAFSIALP 114
           F  GI GLDESYLPRWIGYGFGSLLLLNHFLGS+SA  +P QL T+ LG+SL +FSI LP
Sbjct: 1   FATGILGLDESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLSTKVLGLSLVSFSIVLP 60

Query: 115 FFGRFLKGVRPMDQAALPGGAEQIFLMSENIFDTQKEDLAWATYVLLRNTNTIAV 169
           + G+FLKG +PMD+  +P   EQIF+MS +I D  KEDLAWA+YVLLRNTN IA+
Sbjct: 61  YLGKFLKGAQPMDEKTIPDDTEQIFVMSTDIVDCLKEDLAWASYVLLRNTNVIAM 115