Jatropha Genome Database

JcCB0143591.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0143591.10 - phase: 0 /partial
         (230 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g31390.1                                                       267   7e-72
Glyma06g43840.1                                                        74   9e-14
Glyma12g14060.1                                                        73   2e-13

>Glyma05g31390.1 
          Length = 676

 Score =  267 bits (682), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 127/169 (75%), Positives = 143/169 (84%), Gaps = 3/169 (1%)

Query: 29  RRIQRLSFHLTPIPCSLYDSNQLGMVECAKAAKLVVNTDKLSLYMRGKHREIQEKVFAYF 88
           RRIQRL+ HL P   +L  + QL M  CA+  KL V+T  LS YMRGKH +IQEKVF YF
Sbjct: 10  RRIQRLTLHLNP--TALVAAKQLEMATCARG-KLSVDTPSLSSYMRGKHVDIQEKVFDYF 66

Query: 89  NSRPELQTPVEIAKDDYRELCWRQLLGLVREAGIRPFRYVADDPVKYFAILEAVGSVDMS 148
           N+ P LQTPVEI+KD++R+LC +QL GLVREAGIRP RYV DDP KYFAILEAVGSVDMS
Sbjct: 67  NANPRLQTPVEISKDEHRDLCMKQLTGLVREAGIRPLRYVVDDPAKYFAILEAVGSVDMS 126

Query: 149 LGIKMGVQYSLWGGSVINLGTKKHREKYFDGIDNLEYPGCFAMTELHHG 197
           LGIKMGVQYSLWGGSV+NLGTKKH++KYFDGIDNL+YPGCFAMTELHHG
Sbjct: 127 LGIKMGVQYSLWGGSVLNLGTKKHKDKYFDGIDNLDYPGCFAMTELHHG 175


>Glyma06g43840.1 
          Length = 675

 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 27/194 (13%)

Query: 27  VSRRIQRLSFHL---TPIPCSLYDSNQ-LGMVECAKAAKLVVNTDKLSLYMRGKHREIQE 82
           VSRR + L+ HL   TP P +L   +  L       +  +  +T ++   M   + E ++
Sbjct: 6   VSRRTEVLTNHLLRRTPPPSALLHPHPCLSYSPPELSNTISFDTREMRKLMDCHNLEERD 65

Query: 83  KVFAY------FNSR---------PELQTPVEIAKDDYRELCWRQLLGLVREAGIRPFRY 127
            +F+       FN R         P+   P+E     ++     + +G + + G+     
Sbjct: 66  WIFSLILQSPLFNPRHRAGRVFVSPDYNQPME-----HQRQATMKRIGYLLQKGVFRGWL 120

Query: 128 VADDP---VKYFAILEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHREKYFDGIDNLE 184
             + P   ++  A+ E +G  D SL +K+GV + LWGG+V  LGTK+H +K+ +  +N +
Sbjct: 121 TGNGPEQELRKLALHEVIGMYDHSLAVKLGVHFFLWGGAVKFLGTKRHHDKWLNSTENYD 180

Query: 185 YPGCFAMTELHHGK 198
             GCFAM+EL HG 
Sbjct: 181 IKGCFAMSELGHGS 194


>Glyma12g14060.1 
          Length = 675

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 46/68 (67%)

Query: 130 DDPVKYFAILEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHREKYFDGIDNLEYPGCF 189
           +  ++  A+ E +G  D SL +K+GV + LWGG+V  LGTK+H +K+ +  +N +  GCF
Sbjct: 126 EQELRKLALHEVIGMYDHSLAVKLGVHFFLWGGAVKFLGTKRHHDKWLNSTENYDIKGCF 185

Query: 190 AMTELHHG 197
           AM+EL HG
Sbjct: 186 AMSELGHG 193