Jatropha Genome Database

JcCB0142901.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0142901.10 + phase: 0 /pseudo/partial
         (355 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g36690.1                                                       391   e-109
Glyma04g03650.1                                                       384   e-106
Glyma06g03740.1                                                       383   e-106
Glyma14g08350.1                                                       383   e-106
Glyma02g34510.1                                                        61   2e-09

>Glyma17g36690.1 
          Length = 843

 Score =  391 bits (1005), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 187/222 (84%), Positives = 198/222 (89%), Gaps = 16/222 (7%)

Query: 150 IHEVMHVLGFDPHAFAHFRDDRKRRRGQVTEQVMDEKLGRMVTRVVLPRVVMHSRHHYGA 209
           IHEVMHVLGFDPHAFAHFRD+RKRRR +VTEQVMDEK+GRMVTRVVLPRVVMHSRHHY A
Sbjct: 298 IHEVMHVLGFDPHAFAHFRDERKRRRNKVTEQVMDEKIGRMVTRVVLPRVVMHSRHHYAA 357

Query: 210 FSENFTGLELEDGG----EGAH------------QSVDTRSVVSKMTLALLEDSGWYQAN 253
           FS NFTGLELEDGG     G+H             SVDTRSVVSKMTLALLEDSGWY+AN
Sbjct: 358 FSGNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKAN 417

Query: 254 YSMADRLDWGRNQGTDFVTLPCNLWKGAYHCNTTQLSGCTYNREAEGYCPIVSYTGDLPQ 313
           YSMADRLDWGRNQGT+FVT PCNLWKGAYHCNTTQ SGCTYNREAEGYCPI++Y+GDLPQ
Sbjct: 418 YSMADRLDWGRNQGTEFVTSPCNLWKGAYHCNTTQFSGCTYNREAEGYCPILTYSGDLPQ 477

Query: 314 WARYFPQPNKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDR 355
           WA+YFPQ NKGGQSSLADYCTYFVAYSDGSCTDT+SARAPDR
Sbjct: 478 WAQYFPQANKGGQSSLADYCTYFVAYSDGSCTDTSSARAPDR 519


>Glyma04g03650.1 
          Length = 859

 Score =  384 bits (985), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 185/222 (83%), Positives = 195/222 (87%), Gaps = 16/222 (7%)

Query: 150 IHEVMHVLGFDPHAFAHFRDDRKRRRGQVTEQVMDEKLGRMVTRVVLPRVVMHSRHHYGA 209
           IHEVMHVLGFDPHAFAHFRD+RKRRR QVTEQVMDEKLGRMVTRVVLPRVVMHSR+HY A
Sbjct: 296 IHEVMHVLGFDPHAFAHFRDERKRRRNQVTEQVMDEKLGRMVTRVVLPRVVMHSRYHYAA 355

Query: 210 FSENFTGLELEDGG----EGAH------------QSVDTRSVVSKMTLALLEDSGWYQAN 253
           FS NF+GLELEDGG     G+H             SVDT+SVVSKMTLALLEDSGWY+AN
Sbjct: 356 FSGNFSGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTKSVVSKMTLALLEDSGWYKAN 415

Query: 254 YSMADRLDWGRNQGTDFVTLPCNLWKGAYHCNTTQLSGCTYNREAEGYCPIVSYTGDLPQ 313
           YSMAD LDWGRNQGT+FVT PCNLWKGAY CNTT  SGCTYNREAEGYCPI++Y+GDLPQ
Sbjct: 416 YSMADHLDWGRNQGTEFVTSPCNLWKGAYRCNTTLFSGCTYNREAEGYCPILTYSGDLPQ 475

Query: 314 WARYFPQPNKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDR 355
           WARYFPQ NKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDR
Sbjct: 476 WARYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDR 517


>Glyma06g03740.1 
          Length = 709

 Score =  383 bits (983), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/222 (82%), Positives = 195/222 (87%), Gaps = 16/222 (7%)

Query: 150 IHEVMHVLGFDPHAFAHFRDDRKRRRGQVTEQVMDEKLGRMVTRVVLPRVVMHSRHHYGA 209
           IHEVMHVLGFDPHAFAHFRD+RKRRR QVTEQVMDEKLGRM TRVVLPRVVMHSR+HY A
Sbjct: 146 IHEVMHVLGFDPHAFAHFRDERKRRRNQVTEQVMDEKLGRMATRVVLPRVVMHSRYHYAA 205

Query: 210 FSENFTGLELEDGG----EGAH------------QSVDTRSVVSKMTLALLEDSGWYQAN 253
           FS NF+GLELEDGG     G+H             SVDTRSVVSKMTLALLEDSGWY+AN
Sbjct: 206 FSGNFSGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKAN 265

Query: 254 YSMADRLDWGRNQGTDFVTLPCNLWKGAYHCNTTQLSGCTYNREAEGYCPIVSYTGDLPQ 313
           YSMAD LDWGRNQGT+FVT PCNLW+GAY CNTTQ SGCTYNREAEGYCPI++Y+GDLP+
Sbjct: 266 YSMADHLDWGRNQGTEFVTSPCNLWEGAYRCNTTQFSGCTYNREAEGYCPILTYSGDLPR 325

Query: 314 WARYFPQPNKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDR 355
           WARYFPQ NKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDR
Sbjct: 326 WARYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDR 367


>Glyma14g08350.1 
          Length = 860

 Score =  383 bits (983), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 185/222 (83%), Positives = 194/222 (87%), Gaps = 16/222 (7%)

Query: 150 IHEVMHVLGFDPHAFAHFRDDRKRRRGQVTEQVMDEKLGRMVTRVVLPRVVMHSRHHYGA 209
           IHEVMHVLGFDPHAFAHFRD+RKRRR +VTEQVMDEK+GR VTRVVLPRVVMHSRHHY A
Sbjct: 297 IHEVMHVLGFDPHAFAHFRDERKRRRIKVTEQVMDEKIGRTVTRVVLPRVVMHSRHHYAA 356

Query: 210 FSENFTGLELEDGG----EGAH------------QSVDTRSVVSKMTLALLEDSGWYQAN 253
           FS NFTGLELEDGG     G+H             SVDTRSVVSKMTLALLEDSGWY+AN
Sbjct: 357 FSRNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKAN 416

Query: 254 YSMADRLDWGRNQGTDFVTLPCNLWKGAYHCNTTQLSGCTYNREAEGYCPIVSYTGDLPQ 313
           YSMADRLDWGRNQGT FVT  CNLWKGAYHCNTTQ SGCTYNREAEGYCPI++Y GDLPQ
Sbjct: 417 YSMADRLDWGRNQGTQFVTSTCNLWKGAYHCNTTQFSGCTYNREAEGYCPILTYNGDLPQ 476

Query: 314 WARYFPQPNKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDR 355
           WA+YFPQ NKGGQSSLADYCTYFVAYSDGSCTDT+SARAPDR
Sbjct: 477 WAQYFPQANKGGQSSLADYCTYFVAYSDGSCTDTSSARAPDR 518


>Glyma02g34510.1 
          Length = 139

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 25/28 (89%), Positives = 26/28 (92%)

Query: 150 IHEVMHVLGFDPHAFAHFRDDRKRRRGQ 177
           IHEVMHVLGFDPHAFAHFRD+RKRR  Q
Sbjct: 112 IHEVMHVLGFDPHAFAHFRDERKRRHNQ 139