Jatropha Genome Database

JcCB0140211.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0140211.10 - phase: 2 /partial
         (421 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g20220.1                                                       674   0.0  
Glyma06g34940.1                                                       600   e-171
Glyma06g34890.1                                                       437   e-122
Glyma12g23470.1                                                       107   2e-23

>Glyma12g20220.1 
          Length = 455

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/381 (82%), Positives = 345/381 (90%), Gaps = 2/381 (0%)

Query: 43  PSDDGD--YQSGFGNSFESEAISGALPRGQNSPLLCPYGLYAEQLSGSSFTSPRKLNQRS 100
           P D G+  Y SGFGN F SEA++GALP  QNSPL+CPYGLYAEQ+SG+SFTSPR  N  S
Sbjct: 4   PIDGGEFVYLSGFGNHFSSEALAGALPVAQNSPLVCPYGLYAEQISGTSFTSPRNRNLFS 63

Query: 101 WFYRIKPSVTHEPFKPRIPSNEKLASEFDKTNSRTTPTQLRWKPMEIPDSPTDFVDGLYT 160
           WFYRIKPSVTHEPFKPR+P N ++ SEF+ +NS   PTQLRWKP++ PDSPTDF+DGL T
Sbjct: 64  WFYRIKPSVTHEPFKPRVPGNGRILSEFNNSNSSANPTQLRWKPLDAPDSPTDFIDGLST 123

Query: 161 VCGAGSSFLRHGFAIHMYTANKSMDNCAFCNADGDFLIVPQKGRLWITTECGKLQVTPGE 220
           VCG+GSSF+RHG+AIHMYTANKSMDNCAFCNADGDFLIVPQ+GRL +TTECG+L+V+PGE
Sbjct: 124 VCGSGSSFMRHGYAIHMYTANKSMDNCAFCNADGDFLIVPQQGRLLVTTECGRLKVSPGE 183

Query: 221 IVVLPQGFRFAVDLPDGPSRGYACEIFGTHFQLPDLGPIGGNGLAAPRDFLVPKAWFEEA 280
           I +LPQGFRF+V+LPDGPSRGY  EIFGTHFQLPDLGPIG NGLA+PRDFLVP AWFE+ 
Sbjct: 184 IAILPQGFRFSVNLPDGPSRGYVAEIFGTHFQLPDLGPIGANGLASPRDFLVPTAWFEDK 243

Query: 281 SRPGYTIIQKFGGELFTAKQDFSPFNVVAWHGNYVPYKYDLKKFCPYNTVLFDHSDPSIN 340
           S PGYTI+QKFGGELF A QDFSPFNVVAWHGNYVPY YDL KFCPYNTVLFDHSDPSIN
Sbjct: 244 SYPGYTIVQKFGGELFDAVQDFSPFNVVAWHGNYVPYMYDLNKFCPYNTVLFDHSDPSIN 303

Query: 341 TVLTAPTDKPGVALLDFVIFPSRWVVAEHTFRPPYYHRNCMSEFMGLIYGGYEAKADGFI 400
           TVLTAPTDKPGVALLDFVIFP RW+VAEHTFRPPYYHRNCMSEFMGLI+GGYEAKADGF+
Sbjct: 304 TVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGGYEAKADGFL 363

Query: 401 PGAASLHSCMTPHGPDTKTYE 421
           PG ASLHSCMTPHGPDTK+YE
Sbjct: 364 PGGASLHSCMTPHGPDTKSYE 384


>Glyma06g34940.1 
          Length = 439

 Score =  600 bits (1546), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 286/381 (75%), Positives = 325/381 (85%), Gaps = 18/381 (4%)

Query: 43  PSDDGDYQ--SGFGNSFESEAISGALPRGQNSPLLCPYGLYAEQLSGSSFTSPRKLNQRS 100
           P D G+++  SGFGN F SEA++GALP  QNSPL+CPYGLYAEQ+SG+SFTSPR  N  S
Sbjct: 4   PIDGGEFECLSGFGNHFSSEALAGALPAAQNSPLVCPYGLYAEQISGTSFTSPRNRNLFS 63

Query: 101 WFYRIKPSVTHEPFKPRIPSNEKLASEFDKTNSRTTPTQLRWKPMEIPDSPTDFVDGLYT 160
           WFYRIKPSVTHEPFKPR+P N ++ SEF+ ++S   PTQLRWKPM+ PDSP DF+DGL T
Sbjct: 64  WFYRIKPSVTHEPFKPRVPGNGRILSEFNNSSSSANPTQLRWKPMDAPDSPMDFIDGLST 123

Query: 161 VCGAGSSFLRHGFAIHMYTANKSMDNCAFCNADGDFLIVPQKGRLWITTECGKLQVTPGE 220
           +CG+GSSF+RHG+AIHMY ANKSMDNCAFCNADGDFLIVPQ+GRL ITTECG+L+V+PGE
Sbjct: 124 MCGSGSSFMRHGYAIHMYNANKSMDNCAFCNADGDFLIVPQQGRLLITTECGRLKVSPGE 183

Query: 221 IVVLPQGFRFAVDLPDGPSRGYACEIFGTHFQLPDLGPIGGNGLAAPRDFLVPKAWFEEA 280
           I ++P GFRF+V+LPDGPSRGY  EIFGTHFQLPDLGPIG NGLA+PRDFLVP AWFE+ 
Sbjct: 184 IAIIPHGFRFSVNLPDGPSRGYVAEIFGTHFQLPDLGPIGANGLASPRDFLVPSAWFEDK 243

Query: 281 SRPGYTIIQKFGGELFTAKQDFSPFNVVAWHGNYVPYKYDLKKFCPYNTVLFDHSDPSIN 340
           S PGYTI+QKFGGELF A   F PF +V+         YD      YN +LFDHSDPSIN
Sbjct: 244 SYPGYTIVQKFGGELFDAVGVF-PFFIVS---------YD------YNHILFDHSDPSIN 287

Query: 341 TVLTAPTDKPGVALLDFVIFPSRWVVAEHTFRPPYYHRNCMSEFMGLIYGGYEAKADGFI 400
           TVLTAPTDKPGVALLDFVIFP RW+VAEHTFRPPYYHRNCMSEFMGLI+GGYEAKADGF+
Sbjct: 288 TVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGGYEAKADGFL 347

Query: 401 PGAASLHSCMTPHGPDTKTYE 421
           PG ASLH+CMTPHGPDTK+YE
Sbjct: 348 PGGASLHNCMTPHGPDTKSYE 368


>Glyma06g34890.1 
          Length = 246

 Score =  437 bits (1123), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 204/245 (83%), Positives = 221/245 (90%), Gaps = 4/245 (1%)

Query: 173 FAIHMYTANKSMDNCAFCNADGDFLIVPQKGRLWITTECGKLQVTPGEIVVLPQGFRFAV 232
           +  + Y ANKSMDNCAFCNADGDFLIVPQ+GRL ITTECG+L+V+PGEI ++P GFRF+V
Sbjct: 5   YITYRYNANKSMDNCAFCNADGDFLIVPQQGRLLITTECGRLKVSPGEIAIIPHGFRFSV 64

Query: 233 DLPDGPSRGYACEIFGTHFQLPDLGPIGGNGLAAPRDFLVPKAWFEEASRPGYTIIQKFG 292
           +LPDGPSRGY  EIFGTHFQLPDLGPIG NGLA+PRDFLVP AWFE+ S PGYTI+QKFG
Sbjct: 65  NLPDGPSRGYVAEIFGTHFQLPDLGPIGANGLASPRDFLVPTAWFEDKSYPGYTIVQKFG 124

Query: 293 GELFTAKQDFSPFNVVAWHGNYVPYKYDLKKFCPYNTVLFDHSDPSINTVLTAPTDKPGV 352
           GELF A QDFSPFNVVAWHGNY    YDL KFCPYNTVLFDHSDPSINTVLTAPTDKPGV
Sbjct: 125 GELFDAVQDFSPFNVVAWHGNY----YDLSKFCPYNTVLFDHSDPSINTVLTAPTDKPGV 180

Query: 353 ALLDFVIFPSRWVVAEHTFRPPYYHRNCMSEFMGLIYGGYEAKADGFIPGAASLHSCMTP 412
           ALLDFVIFP RW+VAEHTF PPYYHRNCMSEFMGLI+GGYEA ADGF+PG ASLH+CMTP
Sbjct: 181 ALLDFVIFPPRWLVAEHTFLPPYYHRNCMSEFMGLIHGGYEANADGFLPGGASLHNCMTP 240

Query: 413 HGPDT 417
           HGPDT
Sbjct: 241 HGPDT 245


>Glyma12g23470.1 
          Length = 119

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 54/67 (80%), Gaps = 2/67 (2%)

Query: 355 LDFVIFPSRWVVAEHTFRPPYYHRNCMSEFMGLIYGGYEAKADGFIPGAASLHSCMTPHG 414
           L  ++FP RW+VAEHTFR  YYH NCMSEFMGLI+GGYE  ADGF+PG AS H+CMTPHG
Sbjct: 1   LFLLLFPRRWLVAEHTFRLSYYHHNCMSEFMGLIHGGYE--ADGFLPGGASFHNCMTPHG 58

Query: 415 PDTKTYE 421
           PDT   E
Sbjct: 59  PDTNDVE 65