Jatropha Genome Database

JcCB0139821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0139821.10 + phase: 0 /pseudo/partial
         (353 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g02950.1                                                       571   e-163
Glyma05g36610.1                                                       552   e-157
Glyma18g38040.1                                                       300   2e-81
Glyma17g11900.1                                                       207   2e-53
Glyma16g09870.1                                                       148   7e-36
Glyma04g15440.1                                                        66   4e-11

>Glyma08g02950.1 
          Length = 731

 Score =  571 bits (1472), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 275/309 (88%), Positives = 292/309 (94%)

Query: 13  VASLRGSISSFQEQASCKTRVSSIAAPFNLCQPFNLQISLSTPLKIDYHSPEEEIAFGPG 72
           VASLRGS+SSFQEQASCKT+V S+  PF+LC PFNL+  LS PLKI YH+PEEEIAFGPG
Sbjct: 277 VASLRGSLSSFQEQASCKTKVPSVEVPFSLCLPFNLKTHLSLPLKIKYHTPEEEIAFGPG 336

Query: 73  CWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRY 132
           CWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIG Y
Sbjct: 337 CWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGNY 396

Query: 133 TNGQFPTDSKEFAKRIFYTVFMGSENSSEATRQRAKVLANEIGSWHLDVSIDGVVSALLS 192
            +G +PTDS+EFAKRIFYTVFMGSENSSE TR RAKVLA+EIGSWHLDVSID VVSA LS
Sbjct: 397 KDGLYPTDSREFAKRIFYTVFMGSENSSEMTRSRAKVLADEIGSWHLDVSIDVVVSAFLS 456

Query: 193 LFQTLTGKRPRYKVDGGSDVENLGLQNIQARIRMVLAFMLASLLPWVHNKSGFYLVLGSS 252
           LFQTLTGKRPRYKVDGGS+VENL LQNIQARIRMVLAFMLASLLPWVH+K GFYLVLGSS
Sbjct: 457 LFQTLTGKRPRYKVDGGSNVENLSLQNIQARIRMVLAFMLASLLPWVHSKPGFYLVLGSS 516

Query: 253 NVDEGLRGYLTKYDCSSADINPIGSISKQDLRAFLRWAAIHLGYSSLAEVESAPPTAELE 312
           NVDEGLRGYLTKYDCSSADINPIGSISKQDLRAFL+WAAIHLGYSSLA++E+APPTAELE
Sbjct: 517 NVDEGLRGYLTKYDCSSADINPIGSISKQDLRAFLQWAAIHLGYSSLADIEAAPPTAELE 576

Query: 313 PIRSNYSQV 321
           PIRSNYSQ+
Sbjct: 577 PIRSNYSQL 585


>Glyma05g36610.1 
          Length = 736

 Score =  552 bits (1422), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 269/314 (85%), Positives = 288/314 (91%), Gaps = 5/314 (1%)

Query: 13  VASLRGSISSFQEQASCKTRVSSIAAPFNLCQPFNLQISLSTPLKIDYHSPEEEIAFGPG 72
           VASLRGS+SSFQEQASCKT+V S+  P++LC PFNL+  LS PLKI YH+PEEEIAFGPG
Sbjct: 277 VASLRGSLSSFQEQASCKTKVPSVEVPYSLCLPFNLKTRLSLPLKIKYHTPEEEIAFGPG 336

Query: 73  CWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRY 132
           CWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIG Y
Sbjct: 337 CWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGNY 396

Query: 133 TNGQFPTDSKEFAKRIFYTVFMGSE-----NSSEATRQRAKVLANEIGSWHLDVSIDGVV 187
            +GQ+PTDS+EFAKRIFYTV +         +SE TR RAKVLA+EIGSWHLDVSID VV
Sbjct: 397 KDGQYPTDSREFAKRIFYTVLVFYTIQMYLPNSEMTRSRAKVLADEIGSWHLDVSIDVVV 456

Query: 188 SALLSLFQTLTGKRPRYKVDGGSDVENLGLQNIQARIRMVLAFMLASLLPWVHNKSGFYL 247
           SA LSLFQTLTGKRPRYKVDGGS+VENL LQNIQARIRMVLAFMLASLLPWVH+K GFYL
Sbjct: 457 SAFLSLFQTLTGKRPRYKVDGGSNVENLSLQNIQARIRMVLAFMLASLLPWVHSKPGFYL 516

Query: 248 VLGSSNVDEGLRGYLTKYDCSSADINPIGSISKQDLRAFLRWAAIHLGYSSLAEVESAPP 307
           VLGSSNVDEGLRGYLTKYDCSSADINPIGSISKQDLRAFLRWAAIHLGYSSLA++E+APP
Sbjct: 517 VLGSSNVDEGLRGYLTKYDCSSADINPIGSISKQDLRAFLRWAAIHLGYSSLADIEAAPP 576

Query: 308 TAELEPIRSNYSQV 321
           TAELEPIRSNYSQ+
Sbjct: 577 TAELEPIRSNYSQL 590


>Glyma18g38040.1 
          Length = 284

 Score =  300 bits (767), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 152/205 (74%), Positives = 164/205 (80%), Gaps = 14/205 (6%)

Query: 114 EIANGDEQVKADAIRIGRYTNGQFPTDSKEFAKRIFYTVFMGSENSSEATRQRAKVLANE 173
           EI NGDEQVKADAIRIG Y +G +P D++EFAKRIFYT+FMGS+NSS+ TR RAKVLANE
Sbjct: 1   EIKNGDEQVKADAIRIGNYKDGLYPIDNREFAKRIFYTMFMGSKNSSKMTRSRAKVLANE 60

Query: 174 IGSWHLDVSIDGVVSALLSLFQTLTGKRPRYKVDGGSDVENLGLQNIQARIRMVLAFMLA 233
           IGSWHLDVSID VVSA LSLFQTLTGKRP YK               Q    MVLAF+LA
Sbjct: 61  IGSWHLDVSIDVVVSAFLSLFQTLTGKRPWYKP--------------QIISLMVLAFLLA 106

Query: 234 SLLPWVHNKSGFYLVLGSSNVDEGLRGYLTKYDCSSADINPIGSISKQDLRAFLRWAAIH 293
           SLLPWVHNK GFYLVLGSSNVDEGL  YLTKYD  S DINPIGS+SKQDLRAFL+W  IH
Sbjct: 107 SLLPWVHNKLGFYLVLGSSNVDEGLHCYLTKYDFISIDINPIGSMSKQDLRAFLQWTTIH 166

Query: 294 LGYSSLAEVESAPPTAELEPIRSNY 318
           LGYSSLA++E APPT E EPI SNY
Sbjct: 167 LGYSSLADIEVAPPTVEPEPICSNY 191


>Glyma17g11900.1 
          Length = 133

 Score =  207 bits (526), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 105/146 (71%), Positives = 116/146 (79%), Gaps = 17/146 (11%)

Query: 114 EIANGDEQVKADAIRIGRYTNGQFPTDSKEFAKRIFYTVFMGSENS---SEATRQRAKVL 170
           EIANGDE VKA AIRIG Y +GQ+PTD++EFAKRIFYTVFMGSEN    SE TR RAKVL
Sbjct: 1   EIANGDEHVKASAIRIGNYKDGQYPTDNREFAKRIFYTVFMGSENRQVLSEMTRSRAKVL 60

Query: 171 ANEIGSWHLDVSIDGVVSALLSLFQTLTGKRPRYKVDGGSDVENLGLQNIQARIRMVLAF 230
            +EIGSW+LDVS+D V              RPRYK+DGGS+VENL LQNI+ARIRMVLAF
Sbjct: 61  VDEIGSWNLDVSVDVV--------------RPRYKIDGGSNVENLSLQNIEARIRMVLAF 106

Query: 231 MLASLLPWVHNKSGFYLVLGSSNVDE 256
           MLASLLPWVH+K G YLVLGSS VDE
Sbjct: 107 MLASLLPWVHSKPGVYLVLGSSYVDE 132


>Glyma16g09870.1 
          Length = 204

 Score =  148 bits (374), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 71/82 (86%), Positives = 76/82 (92%)

Query: 183 IDGVVSALLSLFQTLTGKRPRYKVDGGSDVENLGLQNIQARIRMVLAFMLASLLPWVHNK 242
           ID ++ A LSLFQTLTGKRPRYKVDGGS+VENL LQNI+ARIRMVLAFML SLLPWVH+K
Sbjct: 60  IDVLMYAFLSLFQTLTGKRPRYKVDGGSNVENLSLQNIEARIRMVLAFMLPSLLPWVHSK 119

Query: 243 SGFYLVLGSSNVDEGLRGYLTK 264
            GFYLVLGSSNVDEGLRGYLTK
Sbjct: 120 PGFYLVLGSSNVDEGLRGYLTK 141


>Glyma04g15440.1 
          Length = 203

 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 29/39 (74%), Positives = 33/39 (84%)

Query: 114 EIANGDEQVKADAIRIGRYTNGQFPTDSKEFAKRIFYTV 152
           EI NGD  VKADAIRIG Y +GQ+PT++KEFAKRIFY V
Sbjct: 58  EITNGDGHVKADAIRIGNYKDGQYPTENKEFAKRIFYIV 96