Jatropha Genome Database

JcCB0138801.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0138801.10 + phase: 0 /partial
         (151 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g06110.1                                                       175   2e-44
Glyma17g16400.3                                                       175   2e-44
Glyma17g16400.1                                                       174   3e-44
Glyma17g16400.4                                                       174   3e-44
Glyma17g16400.2                                                       164   4e-41
Glyma07g12660.2                                                       130   4e-31
Glyma07g12660.1                                                       130   5e-31
Glyma03g24280.2                                                       126   8e-30
Glyma03g24280.1                                                       126   9e-30
Glyma03g24280.3                                                       126   1e-29

>Glyma05g06110.1 
          Length = 393

 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/102 (80%), Positives = 92/102 (90%)

Query: 50  SVKCDMAEPVNVGNGKPSIPILNERTLPKFLESARMEKSVNRNSTRLKLFSGSANPALSQ 109
           +VKCDM+E  N  NGKP IP+LNERTLPKF+ESAR  K+V+RNS RLKLFSG+ANP LSQ
Sbjct: 37  TVKCDMSESSNFVNGKPIIPVLNERTLPKFMESAREAKAVSRNSNRLKLFSGTANPTLSQ 96

Query: 110 EIAWYMGLELGKINIKRFADGEIYVQLQESVRGCDVYLLQPT 151
           EIA YMGLELGKI+IKRFADGEIYVQLQESVRGC+VYL+QPT
Sbjct: 97  EIARYMGLELGKISIKRFADGEIYVQLQESVRGCNVYLIQPT 138


>Glyma17g16400.3 
          Length = 405

 Score =  175 bits (443), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/103 (79%), Positives = 91/103 (88%)

Query: 49  PSVKCDMAEPVNVGNGKPSIPILNERTLPKFLESARMEKSVNRNSTRLKLFSGSANPALS 108
           P+ KCDM+E  N  NGKP IP+LNERTLPKF+ESAR  K+V+RNS RLKLFSG ANP LS
Sbjct: 48  PNTKCDMSESSNFVNGKPIIPVLNERTLPKFMESAREAKTVSRNSNRLKLFSGRANPTLS 107

Query: 109 QEIAWYMGLELGKINIKRFADGEIYVQLQESVRGCDVYLLQPT 151
           QEIA YMGLELGKI+IKRFADGEIYVQLQESVRGC+VYL+QPT
Sbjct: 108 QEIARYMGLELGKISIKRFADGEIYVQLQESVRGCNVYLIQPT 150


>Glyma17g16400.1 
          Length = 406

 Score =  174 bits (441), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 82/102 (80%), Positives = 91/102 (89%)

Query: 50  SVKCDMAEPVNVGNGKPSIPILNERTLPKFLESARMEKSVNRNSTRLKLFSGSANPALSQ 109
           +VKCDM+E  N  NGKP IP+LNERTLPKF+ESAR  K+V+RNS RLKLFSG ANP LSQ
Sbjct: 50  TVKCDMSESSNFVNGKPIIPVLNERTLPKFMESAREAKTVSRNSNRLKLFSGRANPTLSQ 109

Query: 110 EIAWYMGLELGKINIKRFADGEIYVQLQESVRGCDVYLLQPT 151
           EIA YMGLELGKI+IKRFADGEIYVQLQESVRGC+VYL+QPT
Sbjct: 110 EIARYMGLELGKISIKRFADGEIYVQLQESVRGCNVYLIQPT 151


>Glyma17g16400.4 
          Length = 337

 Score =  174 bits (441), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 82/102 (80%), Positives = 91/102 (89%)

Query: 50  SVKCDMAEPVNVGNGKPSIPILNERTLPKFLESARMEKSVNRNSTRLKLFSGSANPALSQ 109
           +VKCDM+E  N  NGKP IP+LNERTLPKF+ESAR  K+V+RNS RLKLFSG ANP LSQ
Sbjct: 50  TVKCDMSESSNFVNGKPIIPVLNERTLPKFMESAREAKTVSRNSNRLKLFSGRANPTLSQ 109

Query: 110 EIAWYMGLELGKINIKRFADGEIYVQLQESVRGCDVYLLQPT 151
           EIA YMGLELGKI+IKRFADGEIYVQLQESVRGC+VYL+QPT
Sbjct: 110 EIARYMGLELGKISIKRFADGEIYVQLQESVRGCNVYLIQPT 151


>Glyma17g16400.2 
          Length = 352

 Score =  164 bits (414), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 78/97 (80%), Positives = 86/97 (88%)

Query: 55  MAEPVNVGNGKPSIPILNERTLPKFLESARMEKSVNRNSTRLKLFSGSANPALSQEIAWY 114
           M+E  N  NGKP IP+LNERTLPKF+ESAR  K+V+RNS RLKLFSG ANP LSQEIA Y
Sbjct: 1   MSESSNFVNGKPIIPVLNERTLPKFMESAREAKTVSRNSNRLKLFSGRANPTLSQEIARY 60

Query: 115 MGLELGKINIKRFADGEIYVQLQESVRGCDVYLLQPT 151
           MGLELGKI+IKRFADGEIYVQLQESVRGC+VYL+QPT
Sbjct: 61  MGLELGKISIKRFADGEIYVQLQESVRGCNVYLIQPT 97


>Glyma07g12660.2 
          Length = 396

 Score =  130 bits (328), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 63/107 (58%), Positives = 81/107 (75%), Gaps = 6/107 (5%)

Query: 51  VKCDMAEPVNVGNGKPSIPIL----NERTLPKFLES--ARMEKSVNRNSTRLKLFSGSAN 104
           V+C   E VN+ NG+PS        +   +P+++ +   R++  VNRN TRL++FSG+AN
Sbjct: 35  VRCKAIEAVNLENGRPSASEFLVSGSGNAIPRYVVAPNTRIQDLVNRNDTRLRIFSGTAN 94

Query: 105 PALSQEIAWYMGLELGKINIKRFADGEIYVQLQESVRGCDVYLLQPT 151
           PAL+QEIA Y+GLELGK  IKRFADGEIYVQLQESVRGCDV+L+QPT
Sbjct: 95  PALAQEIACYLGLELGKTKIKRFADGEIYVQLQESVRGCDVFLVQPT 141


>Glyma07g12660.1 
          Length = 402

 Score =  130 bits (327), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 63/107 (58%), Positives = 81/107 (75%), Gaps = 6/107 (5%)

Query: 51  VKCDMAEPVNVGNGKPSIPIL----NERTLPKFLES--ARMEKSVNRNSTRLKLFSGSAN 104
           V+C   E VN+ NG+PS        +   +P+++ +   R++  VNRN TRL++FSG+AN
Sbjct: 35  VRCKAIEAVNLENGRPSASEFLVSGSGNAIPRYVVAPNTRIQDLVNRNDTRLRIFSGTAN 94

Query: 105 PALSQEIAWYMGLELGKINIKRFADGEIYVQLQESVRGCDVYLLQPT 151
           PAL+QEIA Y+GLELGK  IKRFADGEIYVQLQESVRGCDV+L+QPT
Sbjct: 95  PALAQEIACYLGLELGKTKIKRFADGEIYVQLQESVRGCDVFLVQPT 141


>Glyma03g24280.2 
          Length = 398

 Score =  126 bits (317), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 63/107 (58%), Positives = 80/107 (74%), Gaps = 6/107 (5%)

Query: 51  VKCDMAEPVNVGNGKPSIPIL----NERTLPKFLES--ARMEKSVNRNSTRLKLFSGSAN 104
           V+    E V + NG+PS        +   +P ++ +  AR++  VNRN TRL++FSG+AN
Sbjct: 37  VRSKAIEAVKLENGRPSASEFVVSGSGNAIPSYVVAPNARVQDLVNRNDTRLRIFSGTAN 96

Query: 105 PALSQEIAWYMGLELGKINIKRFADGEIYVQLQESVRGCDVYLLQPT 151
           PAL+QEIA Y+GLELGKI IKRFADGEIYVQLQESVRGCDV+L+QPT
Sbjct: 97  PALAQEIACYLGLELGKIKIKRFADGEIYVQLQESVRGCDVFLVQPT 143


>Glyma03g24280.1 
          Length = 404

 Score =  126 bits (316), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 63/107 (58%), Positives = 80/107 (74%), Gaps = 6/107 (5%)

Query: 51  VKCDMAEPVNVGNGKPSIPIL----NERTLPKFLES--ARMEKSVNRNSTRLKLFSGSAN 104
           V+    E V + NG+PS        +   +P ++ +  AR++  VNRN TRL++FSG+AN
Sbjct: 37  VRSKAIEAVKLENGRPSASEFVVSGSGNAIPSYVVAPNARVQDLVNRNDTRLRIFSGTAN 96

Query: 105 PALSQEIAWYMGLELGKINIKRFADGEIYVQLQESVRGCDVYLLQPT 151
           PAL+QEIA Y+GLELGKI IKRFADGEIYVQLQESVRGCDV+L+QPT
Sbjct: 97  PALAQEIACYLGLELGKIKIKRFADGEIYVQLQESVRGCDVFLVQPT 143


>Glyma03g24280.3 
          Length = 397

 Score =  126 bits (316), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/107 (58%), Positives = 80/107 (74%), Gaps = 6/107 (5%)

Query: 51  VKCDMAEPVNVGNGKPSIPIL----NERTLPKFLES--ARMEKSVNRNSTRLKLFSGSAN 104
           V+    E V + NG+PS        +   +P ++ +  AR++  VNRN TRL++FSG+AN
Sbjct: 37  VRSKAIEAVKLENGRPSASEFVVSGSGNAIPSYVVAPNARVQDLVNRNDTRLRIFSGTAN 96

Query: 105 PALSQEIAWYMGLELGKINIKRFADGEIYVQLQESVRGCDVYLLQPT 151
           PAL+QEIA Y+GLELGKI IKRFADGEIYVQLQESVRGCDV+L+QPT
Sbjct: 97  PALAQEIACYLGLELGKIKIKRFADGEIYVQLQESVRGCDVFLVQPT 143