Jatropha Genome Database

JcCB0137471.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0137471.10 - phase: 0 /partial
         (130 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g28530.1                                                       257   2e-69
Glyma19g31280.1                                                       254   1e-68
Glyma18g49660.1                                                        89   9e-19
Glyma09g37020.1                                                        87   3e-18
Glyma03g07090.1                                                        64   4e-11
Glyma09g37020.3                                                        49   1e-06
Glyma09g37020.2                                                        49   1e-06

>Glyma03g28530.1 
          Length = 468

 Score =  257 bits (656), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 124/129 (96%), Positives = 127/129 (98%)

Query: 2   QDNAQKIAEFLAAHPQVKKVNYAGLPGHPGRDLHYSQAKGAGSVLSFLTGSLALSKHIVE 61
           QDNAQKIAEFLA+HP+VKKVNYAGLPGHPGRDLHYSQAKGAGSVLSFLTGSL LSKHIVE
Sbjct: 340 QDNAQKIAEFLASHPRVKKVNYAGLPGHPGRDLHYSQAKGAGSVLSFLTGSLELSKHIVE 399

Query: 62  TTKYFSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDLIRISVGIEDVNDLIADL 121
           TTKYFSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDL+RISVGIEDVNDLIADL
Sbjct: 400 TTKYFSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDLVRISVGIEDVNDLIADL 459

Query: 122 DYALRTGPL 130
           D ALRTGPL
Sbjct: 460 DNALRTGPL 468


>Glyma19g31280.1 
          Length = 467

 Score =  254 bits (650), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 123/129 (95%), Positives = 127/129 (98%)

Query: 2   QDNAQKIAEFLAAHPQVKKVNYAGLPGHPGRDLHYSQAKGAGSVLSFLTGSLALSKHIVE 61
           QDNAQKIAEFLA+HP+VK+VNYAGLPGHPGRDLHYSQAKGAGSVLSFLTGSLALSKHIVE
Sbjct: 339 QDNAQKIAEFLASHPRVKEVNYAGLPGHPGRDLHYSQAKGAGSVLSFLTGSLALSKHIVE 398

Query: 62  TTKYFSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDLIRISVGIEDVNDLIADL 121
           TTKYFSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDL+RISVGIEDVNDLIADL
Sbjct: 399 TTKYFSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDLVRISVGIEDVNDLIADL 458

Query: 122 DYALRTGPL 130
             ALRTGPL
Sbjct: 459 GNALRTGPL 467


>Glyma18g49660.1 
          Length = 568

 Score = 89.4 bits (220), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 7   KIAEFLAAHPQVKKVNYAGLPGHPGRDLHYSQAKGAGSVLSF-LTGSLALSKHIVETTKY 65
           ++AE L AHP+VK+V Y GLP HP  +L   Q  G G V+SF + G L  +   +++ K 
Sbjct: 446 RMAELLEAHPKVKRVYYPGLPSHPEHELAKRQMTGFGGVVSFEIDGDLHTTIKFIDSLKI 505

Query: 66  FSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDLIRISVGIEDVNDLIADLDYAL 125
             I  SFG  +S++  P  +S+  +P + R    + ++L+R S G+ED  DL AD+  AL
Sbjct: 506 PYIAASFGGCESIVDQPAILSYWDLPQSERAKYKIYDNLVRFSFGVEDFEDLKADVLQAL 565


>Glyma09g37020.1 
          Length = 536

 Score = 87.4 bits (215), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 70/121 (57%), Gaps = 1/121 (0%)

Query: 7   KIAEFLAAHPQVKKVNYAGLPGHPGRDLHYSQAKGAGSVLSF-LTGSLALSKHIVETTKY 65
           ++A+ L AHP+VK+V Y GLP HP  +L   Q  G G V+SF + G L  +   +++ K 
Sbjct: 414 RMAKLLEAHPKVKRVYYPGLPSHPEHELAKRQMTGFGGVVSFEIDGDLHTTIKFIDSLKI 473

Query: 66  FSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDLIRISVGIEDVNDLIADLDYAL 125
             I  SFG  +S++  P  +S+  +P + R    + ++L+R S G+ED  DL AD+  AL
Sbjct: 474 PYIAASFGGCESIVDQPAILSYWDLPQSERAKYKIYDNLVRFSFGVEDFEDLKADVLQAL 533

Query: 126 R 126
            
Sbjct: 534 E 534


>Glyma03g07090.1 
          Length = 112

 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 13/60 (21%)

Query: 71  SFGSVKSLISMPCFMSHASIPAAVREARGLTEDLIRISVGIEDVNDLIADLDYALRTGPL 130
           + GSVKSLISMPCF+             GLTEDL+ I VG ED++DLI DL  ALRTGPL
Sbjct: 66  TIGSVKSLISMPCFI-------------GLTEDLVHIFVGSEDMHDLIVDLANALRTGPL 112


>Glyma09g37020.3 
          Length = 459

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 29/45 (64%)

Query: 7   KIAEFLAAHPQVKKVNYAGLPGHPGRDLHYSQAKGAGSVLSFLTG 51
           ++A+ L AHP+VK+V Y GLP HP  +L   Q  G G V+SF  G
Sbjct: 414 RMAKLLEAHPKVKRVYYPGLPSHPEHELAKRQMTGFGGVVSFEVG 458


>Glyma09g37020.2 
          Length = 459

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 29/45 (64%)

Query: 7   KIAEFLAAHPQVKKVNYAGLPGHPGRDLHYSQAKGAGSVLSFLTG 51
           ++A+ L AHP+VK+V Y GLP HP  +L   Q  G G V+SF  G
Sbjct: 414 RMAKLLEAHPKVKRVYYPGLPSHPEHELAKRQMTGFGGVVSFEVG 458