Jatropha Genome Database

JcCB0133481.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0133481.10 - phase: 0 
         (251 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g32440.1                                                        55   8e-08
Glyma20g37240.1                                                        54   1e-07
Glyma10g30160.1                                                        54   1e-07
Glyma19g43180.1                                                        53   4e-07
Glyma07g19780.1                                                        52   7e-07
Glyma05g14460.1                                                        50   2e-06
Glyma03g40520.1                                                        50   2e-06

>Glyma13g32440.1 
          Length = 393

 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 16/118 (13%)

Query: 65  KQSNRLWNNEDETVLLSAMINLGIKSG----DSNNVDRLYDHVIKDLHCTTVSKSQLTEK 120
           K+  RLW+ EDE  ++  ++    K+G       N +  +D V K LH   VS +QL EK
Sbjct: 199 KKFQRLWSEEDELAIVKGVVEFTSKTGLDPLKFPNTNAFHDFVKKSLHVE-VSCNQLKEK 257

Query: 121 VHRLRKKYKKNLVRGGRDS---LSGKHEIELFDLCHQLWEKSSQILAITAISAPAGGG 175
           V RL+KK++    +G        S  H+ + F+L  ++W +         ++A A GG
Sbjct: 258 VRRLKKKFETQAGKGKNGEAPKFSKPHDQKFFELSKKVWGRE--------VTAGANGG 307


>Glyma20g37240.1 
          Length = 354

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 12/124 (9%)

Query: 69  RLWNNEDETVLLSAMINLGIKSGDS--NNVDRLYDHVIKDLHCTTVSKSQLTEKVHRLRK 126
           RLW +EDE  LL   +    + G S  N+    YD +   L     +K+QL EK+ RL+K
Sbjct: 95  RLWTDEDEIGLLQGFLEYTAQRGSSHHNDTALFYDQIKSKLQLG-FNKNQLVEKLRRLKK 153

Query: 127 KYKK--NLVRGGRD-SLSGKHEIELFDLCHQLWEKSSQILAIT-----AISAPAGGGNPK 178
           KY+   N +  G++ S    H+   F++  ++W  ++ I          I+ P  G + K
Sbjct: 154 KYRNVLNKISSGKEVSFKSPHDRATFEISRRIWSNTAPITGPVEDDDEIITNPNFGNSAK 213

Query: 179 -PIS 181
            PIS
Sbjct: 214 MPIS 217


>Glyma10g30160.1 
          Length = 372

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 6/99 (6%)

Query: 69  RLWNNEDETVLLSAMINLGIKSGDSNNVDR--LYDHVIKDLHCTTVSKSQLTEKVHRLRK 126
           RLW +EDE  LL   ++   + G S++ D    YD +   L     +K+QL EK+ RL+K
Sbjct: 95  RLWTDEDEIGLLQGFLDYTAQRGSSHHSDTALFYDQIKSKLQLG-FNKNQLVEKLRRLKK 153

Query: 127 KYKKNL--VRGGRD-SLSGKHEIELFDLCHQLWEKSSQI 162
           KY+  +  +  G+D S    H+   F++  ++W  ++ I
Sbjct: 154 KYRNVVTKISSGKDVSFKSPHDKATFEISRRIWSNTAPI 192


>Glyma19g43180.1 
          Length = 404

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 6/99 (6%)

Query: 69  RLWNNEDETVLLSAMINLGIKSGDS--NNVDRLYDHVIKDLHCTTVSKSQLTEKVHRLRK 126
           RLW +EDE  LL   ++   + G S  N+    YD +   L     +K+QL EK+ RL+K
Sbjct: 111 RLWTDEDEIELLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLD-FNKNQLVEKIRRLKK 169

Query: 127 KYKK--NLVRGGRD-SLSGKHEIELFDLCHQLWEKSSQI 162
           KY+   N +  G++ S    H+   F++  ++W   + I
Sbjct: 170 KYRNVLNKIGSGKEFSFKSAHDQATFEISRKIWSNVTPI 208


>Glyma07g19780.1 
          Length = 203

 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 13/124 (10%)

Query: 69  RLWNNEDETVLLSAMINLGIKSGDS--NNVDRLYDHVIKDLHCTTVSKSQLTEKVHRLRK 126
           RLW +EDE  LL   ++  ++ G S  N+    YD +   L     +K+QL EK+ RL+K
Sbjct: 59  RLWTDEDEIKLLQGFLDYTLQRGSSHHNDTTLFYDQIKSKLQLN-FNKNQLVEKIRRLKK 117

Query: 127 KYKKNLVRGGRD---SLSGKHEIELFDLCHQLWEKSSQIL-------AITAISAPAGGGN 176
           KY+  L +   D   S    H+   F++  ++W   + ++        I    +P    N
Sbjct: 118 KYRNVLNKICSDKEFSFKSTHDQATFEISRKIWSNVTPVVDNSLDDDEINPNRSPNPNLN 177

Query: 177 PKPI 180
             P+
Sbjct: 178 FSPV 181


>Glyma05g14460.1 
          Length = 144

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 6/93 (6%)

Query: 69  RLWNNEDETVLLSAMINLGIKSGDSNNVDR--LYDHVIKDLHCTTVSKSQLTEKVHRLRK 126
           +LW +EDE  LL   +    + G S++ D    YD +   L     +K+QL EK+ RL+K
Sbjct: 1   QLWTDEDEIELLQGFLYYTSQQGSSHHSDTALFYDQIKSKLQLD-FNKNQLVEKIRRLKK 59

Query: 127 KYK---KNLVRGGRDSLSGKHEIELFDLCHQLW 156
           KY+    N+  G   S    H+   F++  ++W
Sbjct: 60  KYRNVLNNIFSGKEFSFKSAHDQATFEISRKIW 92


>Glyma03g40520.1 
          Length = 405

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 6/99 (6%)

Query: 69  RLWNNEDETVLLSAMINLGIKSGDS--NNVDRLYDHVIKDLHCTTVSKSQLTEKVHRLRK 126
           RLW +EDE  LL   ++   + G S  N+    YD +   L     +K+QL EK+ RL+K
Sbjct: 110 RLWTDEDEIELLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLD-FNKNQLVEKIRRLKK 168

Query: 127 KYKKNLVR---GGRDSLSGKHEIELFDLCHQLWEKSSQI 162
           KY+  L +   G   S    H+   F++  ++W   + +
Sbjct: 169 KYRNVLNKICSGKEFSFKSAHDQATFEISRKIWSNVTPV 207