Jatropha Genome Database

JcCB0133321.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0133321.10 - phase: 0 
         (178 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g06340.1                                                       306   6e-84
Glyma07g28020.1                                                       306   9e-84
Glyma07g28020.2                                                       305   2e-83
Glyma13g04830.1                                                       154   4e-38
Glyma20g01510.1                                                        61   6e-10
Glyma06g15510.1                                                        48   4e-06
Glyma05g32190.1                                                        48   6e-06

>Glyma16g06340.1 
          Length = 222

 Score =  306 bits (785), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 152/181 (83%), Positives = 162/181 (89%), Gaps = 7/181 (3%)

Query: 1   MGELGCHFEVYRNDELTVEELKRKNPRGVLISPGPGPPQDSGISLQTVLELGPLVPLFGE 60
           MGELG HFEVYRNDELTVEEL+RKNPRGVLISPGPG PQDSGISLQTVLELGP VPLFG 
Sbjct: 39  MGELGFHFEVYRNDELTVEELRRKNPRGVLISPGPGEPQDSGISLQTVLELGPTVPLFGV 98

Query: 61  CMGLQW-------KIVRSPYGVVHGKSSPVYYDEKGEDGLFSGLENPFTAGRYHSLVIEK 113
           CMGLQ        KIVRSP+GV+HGKSS VYYDEKGEDGL +GL NPF AGRYHSLVIEK
Sbjct: 99  CMGLQCIGEAFGGKIVRSPHGVMHGKSSMVYYDEKGEDGLLAGLSNPFLAGRYHSLVIEK 158

Query: 114 DSFPSEELEITAWTEDGLIMAARHKKYKHLQGVQFHPESIITSEGKSIVRNFVKMIERKE 173
           +SFP +ELE TAWTEDGLIMAARHKKYKHLQGVQFHPESIIT EGK+IVRNFVK+IE++E
Sbjct: 159 ESFPHDELEATAWTEDGLIMAARHKKYKHLQGVQFHPESIITPEGKTIVRNFVKLIEKRE 218

Query: 174 A 174
           A
Sbjct: 219 A 219


>Glyma07g28020.1 
          Length = 213

 Score =  306 bits (783), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 151/181 (83%), Positives = 160/181 (88%), Gaps = 7/181 (3%)

Query: 1   MGELGCHFEVYRNDELTVEELKRKNPRGVLISPGPGPPQDSGISLQTVLELGPLVPLFGE 60
           MGELG HFEVYRNDELTVEELKRKNPRGVLISPGPG PQDSGISLQTVLELGP VPLFG 
Sbjct: 30  MGELGFHFEVYRNDELTVEELKRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGV 89

Query: 61  CMGLQW-------KIVRSPYGVVHGKSSPVYYDEKGEDGLFSGLENPFTAGRYHSLVIEK 113
           CMGLQ        KIVR+P+GV+HGKSS VYYDEKGEDG+ +GL NPF AGRYHSLVIEK
Sbjct: 90  CMGLQCIGEAFGGKIVRAPHGVMHGKSSMVYYDEKGEDGVLAGLSNPFLAGRYHSLVIEK 149

Query: 114 DSFPSEELEITAWTEDGLIMAARHKKYKHLQGVQFHPESIITSEGKSIVRNFVKMIERKE 173
            SFP +ELE+TAWTEDGLIMAARHKKYKHLQGVQFHPESIIT EGK+IV NFVK+IER E
Sbjct: 150 GSFPDDELEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITPEGKTIVHNFVKLIERSE 209

Query: 174 A 174
           A
Sbjct: 210 A 210


>Glyma07g28020.2 
          Length = 184

 Score =  305 bits (781), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 151/181 (83%), Positives = 160/181 (88%), Gaps = 7/181 (3%)

Query: 1   MGELGCHFEVYRNDELTVEELKRKNPRGVLISPGPGPPQDSGISLQTVLELGPLVPLFGE 60
           MGELG HFEVYRNDELTVEELKRKNPRGVLISPGPG PQDSGISLQTVLELGP VPLFG 
Sbjct: 1   MGELGFHFEVYRNDELTVEELKRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGV 60

Query: 61  CMGLQW-------KIVRSPYGVVHGKSSPVYYDEKGEDGLFSGLENPFTAGRYHSLVIEK 113
           CMGLQ        KIVR+P+GV+HGKSS VYYDEKGEDG+ +GL NPF AGRYHSLVIEK
Sbjct: 61  CMGLQCIGEAFGGKIVRAPHGVMHGKSSMVYYDEKGEDGVLAGLSNPFLAGRYHSLVIEK 120

Query: 114 DSFPSEELEITAWTEDGLIMAARHKKYKHLQGVQFHPESIITSEGKSIVRNFVKMIERKE 173
            SFP +ELE+TAWTEDGLIMAARHKKYKHLQGVQFHPESIIT EGK+IV NFVK+IER E
Sbjct: 121 GSFPDDELEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITPEGKTIVHNFVKLIERSE 180

Query: 174 A 174
           A
Sbjct: 181 A 181


>Glyma13g04830.1 
          Length = 173

 Score =  154 bits (390), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 89/158 (56%), Positives = 103/158 (65%), Gaps = 7/158 (4%)

Query: 3   ELGCHFEVYRNDELTVEELKRKNPRGVLISPGPGPPQDSGISLQTVLELGPLVPLFGECM 62
           ELG  FEVYRNDELTVE LK KNP+GVLIS G   PQDSGISLQTVLELGP +PLFG CM
Sbjct: 1   ELGFQFEVYRNDELTVE-LKSKNPKGVLISLGL-EPQDSGISLQTVLELGPTMPLFGVCM 58

Query: 63  GLQWKIVRSPYGVVHGKSSPVYYD----EKGEDGLFSGLENPFTAGRYHSLVIEKDSFPS 118
               + +R            + +     EK E  L       F AGRYH LVI+KDSFP 
Sbjct: 59  AFGGECIRCLEDCSCSSEKTLKFTMMRREKME-YLLDYQSRSFLAGRYHGLVIDKDSFPD 117

Query: 119 EELEITAWTEDGLIMAARHKKYKHLQGVQFHPESIITS 156
           +ELE+TA T+DGLIM ARHKKYKHL+ + +    +I S
Sbjct: 118 DELEVTASTKDGLIMTARHKKYKHLRKIVYSISFLIWS 155


>Glyma20g01510.1 
          Length = 87

 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/32 (87%), Positives = 28/32 (87%)

Query: 35 PGPPQDSGISLQTVLELGPLVPLFGECMGLQW 66
          PG PQDSGISLQTVLELGP VPLFG CMGLQ 
Sbjct: 49 PGEPQDSGISLQTVLELGPTVPLFGVCMGLQC 80


>Glyma06g15510.1 
          Length = 438

 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 20/185 (10%)

Query: 1   MGELGCHFEVYRNDELTVEELKRKNPRGVLISPGPGPPQDSGISLQTVLELGPLVPLFGE 60
           +   GC   V        E LK K P GV+ S GPG P     +++TV  +   VP+FG 
Sbjct: 252 LASYGCKITVVPCTWPASETLKMK-PNGVIFSNGPGDPSAVPYAIETVKNIIGKVPVFGI 310

Query: 61  CMGLQW-------KIVRSPYGVVHGKSSPVYYDEKGEDGLFSGLENPFTAGRYHSLVIEK 113
           CMG Q        K  +  +G  HG + PV     G   +         + + H+  ++ 
Sbjct: 311 CMGHQLLGQALGGKTFKMKFG-HHGGNHPVRNLRSGHVEI---------SAQNHNYAVDP 360

Query: 114 DSFPSEELEITAWTEDGLIMAARHKKYKHLQGVQFHPE-SIITSEGKSIVRNFVKMIERK 172
            + P E +E+T    +    A      + L  +Q+HPE S    +   I R F++++++ 
Sbjct: 361 ATLP-EGVEVTHINLNDGSCAGLAFPAQQLMSLQYHPEASPGPHDSDYIFREFIELMKQG 419

Query: 173 EAESQ 177
           +  ++
Sbjct: 420 KNRTK 424


>Glyma05g32190.1 
          Length = 429

 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 21/186 (11%)

Query: 1   MGELGCHFEVYRNDELTVEELKRKNPRGVLISPGPGPPQDSGISLQTVLELGPLVPLFGE 60
           +   GC   V  +     E LK K P GVL S GPG P     +++TV  +   VP+FG 
Sbjct: 245 LASYGCKITVVPSTWPASETLKMK-PDGVLFSNGPGDPSAVPYAVETVKNILGKVPVFGI 303

Query: 61  CMGLQW-------KIVRSPYGVVHGKSSPVYYDEKGEDGLFSGLENPFTAGRYHSLVIEK 113
           CMG Q        K  +  +G  HG + PV     G+  +         + + H+  ++ 
Sbjct: 304 CMGHQLLGQALGGKTFKMKFG-HHGGNHPVRNLRTGQVEI---------SAQNHNYAVDP 353

Query: 114 DSFPSEELEITAWTEDGLIMAARHKKYKHLQGVQFHPE-SIITSEGKSIVRNFVK-MIER 171
            + P E +E+T    +    A      + +  +Q+HPE S    +     R+FV+ M++ 
Sbjct: 354 ATLP-EGVEVTHRNLNDGSCAGLAFPAQRIMSLQYHPEASPGPHDSDYAFRDFVELMMQE 412

Query: 172 KEAESQ 177
           K  +S+
Sbjct: 413 KNKKSE 418