Jatropha Genome Database

JcCB0131991.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0131991.10 - phase: 2 /pseudo/partial
         (179 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g02050.2                                                       216   8e-57
Glyma01g02050.1                                                       216   8e-57
Glyma06g03790.4                                                       216   1e-56
Glyma06g03790.3                                                       213   7e-56
Glyma06g03790.2                                                       213   7e-56
Glyma06g03790.1                                                       213   7e-56
Glyma06g03790.5                                                       177   5e-45
Glyma09g33890.1                                                       167   6e-42
Glyma01g07900.1                                                       111   4e-25
Glyma01g29710.1                                                       111   5e-25
Glyma17g29880.1                                                       107   8e-24
Glyma01g29700.1                                                        98   5e-21
Glyma17g19770.1                                                        97   9e-21

>Glyma01g02050.2 
          Length = 233

 Score =  216 bits (551), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 105/160 (65%), Positives = 130/160 (81%), Gaps = 4/160 (2%)

Query: 17  STNIIISLVFIAMVRIFYVIYRSGKPLRPKSPKPMSTLIVLGSGGHTAEMINVLSVLQKD 76
           S   ++SL+   +VR+ YV+Y S KPL  ++ KP STLI+LGSGGHTAEM+N+L+VLQK 
Sbjct: 20  SAVFVVSLI---LVRLLYVLYCSSKPLSKRASKPFSTLIILGSGGHTAEMLNLLAVLQKG 76

Query: 77  WFTPRFYIAAATDNMSLQKARVLEDSLIDTTGDKVV-SAKFMQIYRSREVGQSYITSIGT 135
            F PRFYIAAATDNMSLQKA++LE+SL      +V  +A+FM+IYRSREVGQSYITS+ T
Sbjct: 77  RFNPRFYIAAATDNMSLQKAQLLENSLAAENATRVTDTAQFMKIYRSREVGQSYITSVWT 136

Query: 136 TLIAVAHALCLMIKIRPQVILCNGPGTCVPLCIIAY*FKV 175
           T +A+ HAL LMIKIRP+VILCNGPGTC+PLC IA+ FKV
Sbjct: 137 TFVAMVHALWLMIKIRPEVILCNGPGTCIPLCAIAFIFKV 176


>Glyma01g02050.1 
          Length = 233

 Score =  216 bits (551), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 105/160 (65%), Positives = 130/160 (81%), Gaps = 4/160 (2%)

Query: 17  STNIIISLVFIAMVRIFYVIYRSGKPLRPKSPKPMSTLIVLGSGGHTAEMINVLSVLQKD 76
           S   ++SL+   +VR+ YV+Y S KPL  ++ KP STLI+LGSGGHTAEM+N+L+VLQK 
Sbjct: 20  SAVFVVSLI---LVRLLYVLYCSSKPLSKRASKPFSTLIILGSGGHTAEMLNLLAVLQKG 76

Query: 77  WFTPRFYIAAATDNMSLQKARVLEDSLIDTTGDKVV-SAKFMQIYRSREVGQSYITSIGT 135
            F PRFYIAAATDNMSLQKA++LE+SL      +V  +A+FM+IYRSREVGQSYITS+ T
Sbjct: 77  RFNPRFYIAAATDNMSLQKAQLLENSLAAENATRVTDTAQFMKIYRSREVGQSYITSVWT 136

Query: 136 TLIAVAHALCLMIKIRPQVILCNGPGTCVPLCIIAY*FKV 175
           T +A+ HAL LMIKIRP+VILCNGPGTC+PLC IA+ FKV
Sbjct: 137 TFVAMVHALWLMIKIRPEVILCNGPGTCIPLCAIAFIFKV 176


>Glyma06g03790.4 
          Length = 211

 Score =  216 bits (549), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 106/157 (67%), Positives = 129/157 (82%), Gaps = 1/157 (0%)

Query: 22  ISLVFIAMVRIFYVIYRSGKPLRPKSPKPMSTLIVLGSGGHTAEMINVLSVLQKDWFTPR 81
           I +V + +VR+ YV+Y S + L  +  KP STLI+LGSGGHTAEM+N+L+VLQKD F PR
Sbjct: 22  IFVVTLILVRLLYVMYCSSRSLSKRVLKPASTLIILGSGGHTAEMLNLLAVLQKDRFKPR 81

Query: 82  FYIAAATDNMSLQKARVLEDSLIDTTGDKVV-SAKFMQIYRSREVGQSYITSIGTTLIAV 140
           FYIAAATDNMSLQKA++LE+SL      +V  +A+FM+IYRSREVGQSYITSI TTLIA+
Sbjct: 82  FYIAAATDNMSLQKAQLLENSLAAENAARVTDTAQFMKIYRSREVGQSYITSIWTTLIAM 141

Query: 141 AHALCLMIKIRPQVILCNGPGTCVPLCIIAY*FKVKY 177
            HAL LMIKIRP+VILCNGPGTC+PLC IA+ FKV +
Sbjct: 142 VHALWLMIKIRPEVILCNGPGTCIPLCSIAFIFKVLF 178


>Glyma06g03790.3 
          Length = 233

 Score =  213 bits (543), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 105/155 (67%), Positives = 128/155 (82%), Gaps = 1/155 (0%)

Query: 22  ISLVFIAMVRIFYVIYRSGKPLRPKSPKPMSTLIVLGSGGHTAEMINVLSVLQKDWFTPR 81
           I +V + +VR+ YV+Y S + L  +  KP STLI+LGSGGHTAEM+N+L+VLQKD F PR
Sbjct: 22  IFVVTLILVRLLYVMYCSSRSLSKRVLKPASTLIILGSGGHTAEMLNLLAVLQKDRFKPR 81

Query: 82  FYIAAATDNMSLQKARVLEDSLIDTTGDKVV-SAKFMQIYRSREVGQSYITSIGTTLIAV 140
           FYIAAATDNMSLQKA++LE+SL      +V  +A+FM+IYRSREVGQSYITSI TTLIA+
Sbjct: 82  FYIAAATDNMSLQKAQLLENSLAAENAARVTDTAQFMKIYRSREVGQSYITSIWTTLIAM 141

Query: 141 AHALCLMIKIRPQVILCNGPGTCVPLCIIAY*FKV 175
            HAL LMIKIRP+VILCNGPGTC+PLC IA+ FK+
Sbjct: 142 VHALWLMIKIRPEVILCNGPGTCIPLCSIAFIFKI 176


>Glyma06g03790.2 
          Length = 233

 Score =  213 bits (543), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 105/155 (67%), Positives = 128/155 (82%), Gaps = 1/155 (0%)

Query: 22  ISLVFIAMVRIFYVIYRSGKPLRPKSPKPMSTLIVLGSGGHTAEMINVLSVLQKDWFTPR 81
           I +V + +VR+ YV+Y S + L  +  KP STLI+LGSGGHTAEM+N+L+VLQKD F PR
Sbjct: 22  IFVVTLILVRLLYVMYCSSRSLSKRVLKPASTLIILGSGGHTAEMLNLLAVLQKDRFKPR 81

Query: 82  FYIAAATDNMSLQKARVLEDSLIDTTGDKVV-SAKFMQIYRSREVGQSYITSIGTTLIAV 140
           FYIAAATDNMSLQKA++LE+SL      +V  +A+FM+IYRSREVGQSYITSI TTLIA+
Sbjct: 82  FYIAAATDNMSLQKAQLLENSLAAENAARVTDTAQFMKIYRSREVGQSYITSIWTTLIAM 141

Query: 141 AHALCLMIKIRPQVILCNGPGTCVPLCIIAY*FKV 175
            HAL LMIKIRP+VILCNGPGTC+PLC IA+ FK+
Sbjct: 142 VHALWLMIKIRPEVILCNGPGTCIPLCSIAFIFKI 176


>Glyma06g03790.1 
          Length = 233

 Score =  213 bits (543), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 105/155 (67%), Positives = 128/155 (82%), Gaps = 1/155 (0%)

Query: 22  ISLVFIAMVRIFYVIYRSGKPLRPKSPKPMSTLIVLGSGGHTAEMINVLSVLQKDWFTPR 81
           I +V + +VR+ YV+Y S + L  +  KP STLI+LGSGGHTAEM+N+L+VLQKD F PR
Sbjct: 22  IFVVTLILVRLLYVMYCSSRSLSKRVLKPASTLIILGSGGHTAEMLNLLAVLQKDRFKPR 81

Query: 82  FYIAAATDNMSLQKARVLEDSLIDTTGDKVV-SAKFMQIYRSREVGQSYITSIGTTLIAV 140
           FYIAAATDNMSLQKA++LE+SL      +V  +A+FM+IYRSREVGQSYITSI TTLIA+
Sbjct: 82  FYIAAATDNMSLQKAQLLENSLAAENAARVTDTAQFMKIYRSREVGQSYITSIWTTLIAM 141

Query: 141 AHALCLMIKIRPQVILCNGPGTCVPLCIIAY*FKV 175
            HAL LMIKIRP+VILCNGPGTC+PLC IA+ FK+
Sbjct: 142 VHALWLMIKIRPEVILCNGPGTCIPLCSIAFIFKI 176


>Glyma06g03790.5 
          Length = 163

 Score =  177 bits (449), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 89/135 (65%), Positives = 110/135 (81%), Gaps = 1/135 (0%)

Query: 22  ISLVFIAMVRIFYVIYRSGKPLRPKSPKPMSTLIVLGSGGHTAEMINVLSVLQKDWFTPR 81
           I +V + +VR+ YV+Y S + L  +  KP STLI+LGSGGHTAEM+N+L+VLQKD F PR
Sbjct: 22  IFVVTLILVRLLYVMYCSSRSLSKRVLKPASTLIILGSGGHTAEMLNLLAVLQKDRFKPR 81

Query: 82  FYIAAATDNMSLQKARVLEDSLIDTTGDKVV-SAKFMQIYRSREVGQSYITSIGTTLIAV 140
           FYIAAATDNMSLQKA++LE+SL      +V  +A+FM+IYRSREVGQSYITSI TTLIA+
Sbjct: 82  FYIAAATDNMSLQKAQLLENSLAAENAARVTDTAQFMKIYRSREVGQSYITSIWTTLIAM 141

Query: 141 AHALCLMIKIRPQVI 155
            HAL LMIKIRP+V+
Sbjct: 142 VHALWLMIKIRPEVV 156


>Glyma09g33890.1 
          Length = 168

 Score =  167 bits (423), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 80/111 (72%), Positives = 95/111 (85%), Gaps = 1/111 (0%)

Query: 66  MINVLSVLQKDWFTPRFYIAAATDNMSLQKARVLEDSLIDTTGDKVV-SAKFMQIYRSRE 124
           M+N+L VLQKD F PRFYIAAATDNMSLQKA++LE+SL      +V  +A+FM+IYRSRE
Sbjct: 1   MLNLLVVLQKDRFNPRFYIAAATDNMSLQKAQLLENSLAAENATRVTDTAQFMKIYRSRE 60

Query: 125 VGQSYITSIGTTLIAVAHALCLMIKIRPQVILCNGPGTCVPLCIIAY*FKV 175
           VGQSYITS+ TTL+A+ HAL LMIKIRP+VILCNGPGTC+PLC IA+ FKV
Sbjct: 61  VGQSYITSVWTTLVAMVHALWLMIKIRPEVILCNGPGTCIPLCAIAFIFKV 111


>Glyma01g07900.1 
          Length = 104

 Score =  111 bits (277), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 63/75 (84%)

Query: 29  MVRIFYVIYRSGKPLRPKSPKPMSTLIVLGSGGHTAEMINVLSVLQKDWFTPRFYIAAAT 88
           +VR+ YV+Y S KPL  ++ KP STLI+LGSGGH AEM+N+L+VLQK    PRFYIAAAT
Sbjct: 29  LVRLLYVLYCSSKPLSKRASKPFSTLIILGSGGHIAEMLNLLAVLQKGRLNPRFYIAAAT 88

Query: 89  DNMSLQKARVLEDSL 103
           DNMSLQKA++LE+SL
Sbjct: 89  DNMSLQKAQLLENSL 103


>Glyma01g29710.1 
          Length = 104

 Score =  111 bits (277), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 52/83 (62%), Positives = 67/83 (80%), Gaps = 3/83 (3%)

Query: 21  IISLVFIAMVRIFYVIYRSGKPLRPKSPKPMSTLIVLGSGGHTAEMINVLSVLQKDWFTP 80
           ++SL+   +VR+ YV+Y S KPL  ++ KP STLI+LGSGGH AEM+N+L+VLQK  F P
Sbjct: 24  VVSLI---LVRLLYVLYCSSKPLSKRASKPFSTLIILGSGGHIAEMLNLLAVLQKGRFNP 80

Query: 81  RFYIAAATDNMSLQKARVLEDSL 103
           RFYI  ATDNMSLQKA++LE+SL
Sbjct: 81  RFYIVVATDNMSLQKAQLLENSL 103


>Glyma17g29880.1 
          Length = 104

 Score =  107 bits (266), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 49/74 (66%), Positives = 60/74 (81%)

Query: 30  VRIFYVIYRSGKPLRPKSPKPMSTLIVLGSGGHTAEMINVLSVLQKDWFTPRFYIAAATD 89
           VR+ YV+Y S KPL  ++ KP STLI+LGSGGH AEM+N+L+VLQK  F PRFYI  A D
Sbjct: 30  VRLLYVLYCSSKPLSKRASKPFSTLIILGSGGHIAEMLNLLAVLQKGRFNPRFYIVVAID 89

Query: 90  NMSLQKARVLEDSL 103
           NMSLQKA++LE+SL
Sbjct: 90  NMSLQKAQLLENSL 103


>Glyma01g29700.1 
          Length = 92

 Score = 97.8 bits (242), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 44/63 (69%), Positives = 53/63 (84%)

Query: 41  KPLRPKSPKPMSTLIVLGSGGHTAEMINVLSVLQKDWFTPRFYIAAATDNMSLQKARVLE 100
           KPL  ++ KP STLI+LGSGGH AEM+N+L+VLQK  F PRFYI  ATDNMSLQKA++LE
Sbjct: 27  KPLSKRASKPFSTLIILGSGGHIAEMLNLLAVLQKGRFNPRFYIVVATDNMSLQKAQLLE 86

Query: 101 DSL 103
           +SL
Sbjct: 87  NSL 89


>Glyma17g19770.1 
          Length = 104

 Score = 97.1 bits (240), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 55/67 (82%)

Query: 37  YRSGKPLRPKSPKPMSTLIVLGSGGHTAEMINVLSVLQKDWFTPRFYIAAATDNMSLQKA 96
           Y S KPL  ++ KP STLI+LGSG H  EM+N+L+VLQK  F PRFYIAAATDNMSLQKA
Sbjct: 37  YCSSKPLSKRASKPFSTLIILGSGRHIVEMLNLLAVLQKGRFNPRFYIAAATDNMSLQKA 96

Query: 97  RVLEDSL 103
           ++LE+SL
Sbjct: 97  QLLENSL 103