Jatropha Genome Database

JcCB0131911.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0131911.20 + phase: 0 /partial
         (187 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g08630.1                                                       308   3e-84
Glyma15g13910.1                                                       306   7e-84
Glyma15g13910.2                                                       306   8e-84
Glyma09g02960.1                                                       304   3e-83

>Glyma08g08630.1 
          Length = 436

 Score =  308 bits (788), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 145/186 (77%), Positives = 166/186 (89%)

Query: 1   MKSYQLSELSRTEVESLKARPRIDFFSIFSIVTPIVDDVRSRGDAAVKDYTTRFDKVKLE 60
           MKSY+LSELS  E+ SL ARPRIDF S+F++V PIVD VR RGDAAVK+YT RFDK +L+
Sbjct: 1   MKSYKLSELSDAELRSLIARPRIDFSSVFALVNPIVDHVRERGDAAVKEYTLRFDKAELD 60

Query: 61  KIVEDVSELPDPELDAAVREAFDVAYDNIYAFHLAQKAAEKSVENMQGVRCKRVPRCISS 120
            IVE VS+LPDP+LDA V+EAFDVAY+NIYAFH AQK  E++VENM+GV+CKRV R I+S
Sbjct: 61  NIVELVSDLPDPQLDAHVKEAFDVAYNNIYAFHAAQKTPERNVENMKGVQCKRVARSINS 120

Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTIVIATPPGQDGSICKEVLYCAKKAGVTHIL 180
           VGLYVPGGTAVLPSTALMLSVPAQIAGCKTIV+ATPP QDG+ICKEV+YCAKK GVTHIL
Sbjct: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTIVLATPPAQDGTICKEVVYCAKKGGVTHIL 180

Query: 181 KAGGAQ 186
           +AGGAQ
Sbjct: 181 RAGGAQ 186


>Glyma15g13910.1 
          Length = 471

 Score =  306 bits (785), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 144/186 (77%), Positives = 168/186 (90%)

Query: 1   MKSYQLSELSRTEVESLKARPRIDFFSIFSIVTPIVDDVRSRGDAAVKDYTTRFDKVKLE 60
           + SY+LS L+ +E++SLK+RPRIDF SIFS+V PIVDDV  RGDAAVK+YT++FDKV+L+
Sbjct: 36  INSYRLSNLTPSELQSLKSRPRIDFSSIFSVVNPIVDDVHKRGDAAVKEYTSKFDKVELD 95

Query: 61  KIVEDVSELPDPELDAAVREAFDVAYDNIYAFHLAQKAAEKSVENMQGVRCKRVPRCISS 120
           K+VE VSELPDP LD  ++EAFDVAYDNIYAFH AQK+ EKSVENM+GV+CKRV R I+S
Sbjct: 96  KVVEVVSELPDPVLDPPIKEAFDVAYDNIYAFHAAQKSPEKSVENMKGVQCKRVARSINS 155

Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTIVIATPPGQDGSICKEVLYCAKKAGVTHIL 180
           VGLYVPGGTAVLPSTALML+VPAQIAGCKTIV+A PP +DG+ CKEVLYCAKKAGVTHIL
Sbjct: 156 VGLYVPGGTAVLPSTALMLAVPAQIAGCKTIVLANPPTRDGTTCKEVLYCAKKAGVTHIL 215

Query: 181 KAGGAQ 186
           KAGGAQ
Sbjct: 216 KAGGAQ 221


>Glyma15g13910.2 
          Length = 382

 Score =  306 bits (784), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 144/186 (77%), Positives = 168/186 (90%)

Query: 1   MKSYQLSELSRTEVESLKARPRIDFFSIFSIVTPIVDDVRSRGDAAVKDYTTRFDKVKLE 60
           + SY+LS L+ +E++SLK+RPRIDF SIFS+V PIVDDV  RGDAAVK+YT++FDKV+L+
Sbjct: 36  INSYRLSNLTPSELQSLKSRPRIDFSSIFSVVNPIVDDVHKRGDAAVKEYTSKFDKVELD 95

Query: 61  KIVEDVSELPDPELDAAVREAFDVAYDNIYAFHLAQKAAEKSVENMQGVRCKRVPRCISS 120
           K+VE VSELPDP LD  ++EAFDVAYDNIYAFH AQK+ EKSVENM+GV+CKRV R I+S
Sbjct: 96  KVVEVVSELPDPVLDPPIKEAFDVAYDNIYAFHAAQKSPEKSVENMKGVQCKRVARSINS 155

Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTIVIATPPGQDGSICKEVLYCAKKAGVTHIL 180
           VGLYVPGGTAVLPSTALML+VPAQIAGCKTIV+A PP +DG+ CKEVLYCAKKAGVTHIL
Sbjct: 156 VGLYVPGGTAVLPSTALMLAVPAQIAGCKTIVLANPPTRDGTTCKEVLYCAKKAGVTHIL 215

Query: 181 KAGGAQ 186
           KAGGAQ
Sbjct: 216 KAGGAQ 221


>Glyma09g02960.1 
          Length = 473

 Score =  304 bits (779), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 143/186 (76%), Positives = 168/186 (90%)

Query: 1   MKSYQLSELSRTEVESLKARPRIDFFSIFSIVTPIVDDVRSRGDAAVKDYTTRFDKVKLE 60
           + SY+LS L+ +E++SLK+RPRIDF SIF +V PIVDDV  RGDAAVK+YT++FDKV+L+
Sbjct: 38  INSYRLSNLTPSELQSLKSRPRIDFSSIFGVVNPIVDDVHKRGDAAVKEYTSKFDKVELD 97

Query: 61  KIVEDVSELPDPELDAAVREAFDVAYDNIYAFHLAQKAAEKSVENMQGVRCKRVPRCISS 120
           KIVE VSELPDP L+  ++EAFDVAYDNIYAFH AQK++EKSVENM+GV+CKRV R I+S
Sbjct: 98  KIVEVVSELPDPVLEPPIKEAFDVAYDNIYAFHAAQKSSEKSVENMKGVQCKRVARSINS 157

Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTIVIATPPGQDGSICKEVLYCAKKAGVTHIL 180
           VGLYVPGGTAVLPSTALML+VPAQIAGCKTIV+A PP +DG+ CKEVLYCAKKAGVTHIL
Sbjct: 158 VGLYVPGGTAVLPSTALMLAVPAQIAGCKTIVLANPPTRDGTTCKEVLYCAKKAGVTHIL 217

Query: 181 KAGGAQ 186
           KAGGAQ
Sbjct: 218 KAGGAQ 223