Jatropha Genome Database

JcCB0131141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0131141.10 + phase: 0 /pseudo
         (202 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g00790.1                                                       233   9e-62
Glyma04g00770.1                                                       233   9e-62
Glyma04g00770.4                                                       232   2e-61
Glyma04g00770.5                                                       232   2e-61
Glyma06g00800.1                                                       221   5e-58
Glyma04g00770.2                                                       213   1e-55
Glyma04g00770.6                                                       187   5e-48
Glyma04g00770.3                                                       185   3e-47
Glyma04g00790.1                                                       106   2e-23

>Glyma06g00790.1 
          Length = 266

 Score =  233 bits (594), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 104/150 (69%), Positives = 125/150 (83%)

Query: 21  QRPISNILLIIAMQTEAMPVVNKFQLEEDQHAAFPKGVPWVWYHGVYNDLNINLVWPGKD 80
           +RPISNI++++AMQTEA+P+VN+FQL ED H+ FP+GVPWV Y G Y DLNI+L+WPGKD
Sbjct: 22  RRPISNIVIVVAMQTEALPIVNRFQLTEDPHSPFPRGVPWVRYQGTYKDLNISLIWPGKD 81

Query: 81  PILGVDSVGTVSASLLTYAAIQALQPDLIINXXXXXXXXXXXXSIGDVYLASDVAFHDRR 140
           P LGVDSVGT+S++L+TYAAIQALQPDLIIN            SIGDV++ SD AFHDRR
Sbjct: 82  PTLGVDSVGTISSALVTYAAIQALQPDLIINAGTAGGFKAKGASIGDVFIVSDCAFHDRR 141

Query: 141 IPIPVFDLYGVGLRKAYSTPNLLKELNLKV 170
           IPIPVFDLYGVG+RK +  PNL+KELNLKV
Sbjct: 142 IPIPVFDLYGVGVRKTFEAPNLVKELNLKV 171


>Glyma04g00770.1 
          Length = 265

 Score =  233 bits (594), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 109/170 (64%), Positives = 131/170 (77%)

Query: 1   MAPHGEGSDAAGDTTVVQAEQRPISNILLIIAMQTEAMPVVNKFQLEEDQHAAFPKGVPW 60
           MA  G+ S+        + + RPISNI++++AMQTEA+P+VN+FQL ED    FP+GVPW
Sbjct: 1   MAALGDQSEEQAMAAQPKPQNRPISNIVIVVAMQTEALPIVNRFQLTEDPDTPFPQGVPW 60

Query: 61  VWYHGVYNDLNINLVWPGKDPILGVDSVGTVSASLLTYAAIQALQPDLIINXXXXXXXXX 120
           V Y G Y DLNI+L+WPGKDP LGVDSVGT+S++L+TYAAIQALQPDLIIN         
Sbjct: 61  VRYQGTYKDLNISLIWPGKDPTLGVDSVGTISSALVTYAAIQALQPDLIINAGTAGGFKA 120

Query: 121 XXXSIGDVYLASDVAFHDRRIPIPVFDLYGVGLRKAYSTPNLLKELNLKV 170
              SIGDV++ SD AFHDRRIPIPVFDLYGVGLRKA+  PNL+KELNLKV
Sbjct: 121 KGASIGDVFIVSDCAFHDRRIPIPVFDLYGVGLRKAFVAPNLVKELNLKV 170


>Glyma04g00770.4 
          Length = 208

 Score =  232 bits (592), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 109/170 (64%), Positives = 131/170 (77%)

Query: 1   MAPHGEGSDAAGDTTVVQAEQRPISNILLIIAMQTEAMPVVNKFQLEEDQHAAFPKGVPW 60
           MA  G+ S+        + + RPISNI++++AMQTEA+P+VN+FQL ED    FP+GVPW
Sbjct: 1   MAALGDQSEEQAMAAQPKPQNRPISNIVIVVAMQTEALPIVNRFQLTEDPDTPFPQGVPW 60

Query: 61  VWYHGVYNDLNINLVWPGKDPILGVDSVGTVSASLLTYAAIQALQPDLIINXXXXXXXXX 120
           V Y G Y DLNI+L+WPGKDP LGVDSVGT+S++L+TYAAIQALQPDLIIN         
Sbjct: 61  VRYQGTYKDLNISLIWPGKDPTLGVDSVGTISSALVTYAAIQALQPDLIINAGTAGGFKA 120

Query: 121 XXXSIGDVYLASDVAFHDRRIPIPVFDLYGVGLRKAYSTPNLLKELNLKV 170
              SIGDV++ SD AFHDRRIPIPVFDLYGVGLRKA+  PNL+KELNLKV
Sbjct: 121 KGASIGDVFIVSDCAFHDRRIPIPVFDLYGVGLRKAFVAPNLVKELNLKV 170


>Glyma04g00770.5 
          Length = 201

 Score =  232 bits (591), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 109/170 (64%), Positives = 131/170 (77%)

Query: 1   MAPHGEGSDAAGDTTVVQAEQRPISNILLIIAMQTEAMPVVNKFQLEEDQHAAFPKGVPW 60
           MA  G+ S+        + + RPISNI++++AMQTEA+P+VN+FQL ED    FP+GVPW
Sbjct: 1   MAALGDQSEEQAMAAQPKPQNRPISNIVIVVAMQTEALPIVNRFQLTEDPDTPFPQGVPW 60

Query: 61  VWYHGVYNDLNINLVWPGKDPILGVDSVGTVSASLLTYAAIQALQPDLIINXXXXXXXXX 120
           V Y G Y DLNI+L+WPGKDP LGVDSVGT+S++L+TYAAIQALQPDLIIN         
Sbjct: 61  VRYQGTYKDLNISLIWPGKDPTLGVDSVGTISSALVTYAAIQALQPDLIINAGTAGGFKA 120

Query: 121 XXXSIGDVYLASDVAFHDRRIPIPVFDLYGVGLRKAYSTPNLLKELNLKV 170
              SIGDV++ SD AFHDRRIPIPVFDLYGVGLRKA+  PNL+KELNLKV
Sbjct: 121 KGASIGDVFIVSDCAFHDRRIPIPVFDLYGVGLRKAFVAPNLVKELNLKV 170


>Glyma06g00800.1 
          Length = 253

 Score =  221 bits (562), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 98/151 (64%), Positives = 120/151 (79%)

Query: 20  EQRPISNILLIIAMQTEAMPVVNKFQLEEDQHAAFPKGVPWVWYHGVYNDLNINLVWPGK 79
           + RPISNI+ ++AMQTEA+P+VN+FQL ED H+ FP+G PWV YHG + DLNINL+W G 
Sbjct: 8   QNRPISNIVFVVAMQTEALPIVNRFQLTEDPHSPFPQGAPWVHYHGTFKDLNINLIWTGN 67

Query: 80  DPILGVDSVGTVSASLLTYAAIQALQPDLIINXXXXXXXXXXXXSIGDVYLASDVAFHDR 139
           DP LGVDS+GT+ ++L TYAAI ALQPDLIIN            SIGD+++ S+ AFHDR
Sbjct: 68  DPTLGVDSIGTIPSALATYAAILALQPDLIINAGTAGGFKAKGASIGDIFVVSECAFHDR 127

Query: 140 RIPIPVFDLYGVGLRKAYSTPNLLKELNLKV 170
           RIPIP+FDLYGVGLRKA+ TP L+KELNLKV
Sbjct: 128 RIPIPIFDLYGVGLRKAFETPKLVKELNLKV 158


>Glyma04g00770.2 
          Length = 233

 Score =  213 bits (542), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 98/138 (71%), Positives = 112/138 (81%)

Query: 33  MQTEAMPVVNKFQLEEDQHAAFPKGVPWVWYHGVYNDLNINLVWPGKDPILGVDSVGTVS 92
           MQTEA+P+VN+FQL ED    FP+GVPWV Y G Y DLNI+L+WPGKDP LGVDSVGT+S
Sbjct: 1   MQTEALPIVNRFQLTEDPDTPFPQGVPWVRYQGTYKDLNISLIWPGKDPTLGVDSVGTIS 60

Query: 93  ASLLTYAAIQALQPDLIINXXXXXXXXXXXXSIGDVYLASDVAFHDRRIPIPVFDLYGVG 152
           ++L+TYAAIQALQPDLIIN            SIGDV++ SD AFHDRRIPIPVFDLYGVG
Sbjct: 61  SALVTYAAIQALQPDLIINAGTAGGFKAKGASIGDVFIVSDCAFHDRRIPIPVFDLYGVG 120

Query: 153 LRKAYSTPNLLKELNLKV 170
           LRKA+  PNL+KELNLKV
Sbjct: 121 LRKAFVAPNLVKELNLKV 138


>Glyma04g00770.6 
          Length = 151

 Score =  187 bits (476), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 88/145 (60%), Positives = 108/145 (74%)

Query: 1   MAPHGEGSDAAGDTTVVQAEQRPISNILLIIAMQTEAMPVVNKFQLEEDQHAAFPKGVPW 60
           MA  G+ S+        + + RPISNI++++AMQTEA+P+VN+FQL ED    FP+GVPW
Sbjct: 1   MAALGDQSEEQAMAAQPKPQNRPISNIVIVVAMQTEALPIVNRFQLTEDPDTPFPQGVPW 60

Query: 61  VWYHGVYNDLNINLVWPGKDPILGVDSVGTVSASLLTYAAIQALQPDLIINXXXXXXXXX 120
           V Y G Y DLNI+L+WPGKDP LGVDSVGT+S++L+TYAAIQALQPDLIIN         
Sbjct: 61  VRYQGTYKDLNISLIWPGKDPTLGVDSVGTISSALVTYAAIQALQPDLIINAGTAGGFKA 120

Query: 121 XXXSIGDVYLASDVAFHDRRIPIPV 145
              SIGDV++ SD AFHDRRIPIPV
Sbjct: 121 KGASIGDVFIVSDCAFHDRRIPIPV 145


>Glyma04g00770.3 
          Length = 213

 Score =  185 bits (469), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 85/117 (72%), Positives = 96/117 (82%)

Query: 54  FPKGVPWVWYHGVYNDLNINLVWPGKDPILGVDSVGTVSASLLTYAAIQALQPDLIINXX 113
           FP+GVPWV Y G Y DLNI+L+WPGKDP LGVDSVGT+S++L+TYAAIQALQPDLIIN  
Sbjct: 2   FPQGVPWVRYQGTYKDLNISLIWPGKDPTLGVDSVGTISSALVTYAAIQALQPDLIINAG 61

Query: 114 XXXXXXXXXXSIGDVYLASDVAFHDRRIPIPVFDLYGVGLRKAYSTPNLLKELNLKV 170
                     SIGDV++ SD AFHDRRIPIPVFDLYGVGLRKA+  PNL+KELNLKV
Sbjct: 62  TAGGFKAKGASIGDVFIVSDCAFHDRRIPIPVFDLYGVGLRKAFVAPNLVKELNLKV 118


>Glyma04g00790.1 
          Length = 193

 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/142 (42%), Positives = 82/142 (57%), Gaps = 7/142 (4%)

Query: 56  KGVPWVWYHGVYNDLNINLVWPGKDPILGVDSVGTVSASLLTYAAIQALQPDLIINXXXX 115
           +GVP V YHG + DLN+N +W G DP LGVDS+GT+ ++L TYAA+ ALQP LIIN    
Sbjct: 48  EGVPLVRYHGTFKDLNMNWIWAGNDPTLGVDSIGTIPSALATYAAVLALQPYLIINAGTA 107

Query: 116 XXXXXXXXSIGDVY------LASDVAFHDRRIPIPVFDLYGVGLRKAYSTPNLLKELNLK 169
                       ++      L S       +    +FDLYG+GLRK + TPNL+KELNLK
Sbjct: 108 GGFKVATILSQAIHYIPHHALFSPTTIKKNKSKSKIFDLYGIGLRKVFETPNLVKELNLK 167

Query: 170 VYXMPRTQLDLLN-VPYLSAIS 190
           +  +    + L+  VP  + IS
Sbjct: 168 ITWIEELLMHLVKFVPLSTKIS 189