Jatropha Genome Database

JcCB0130751.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0130751.20 + phase: 0 /partial
         (155 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g03080.1                                                       164   5e-41
Glyma02g16740.1                                                       163   5e-41
Glyma02g16740.2                                                       161   3e-40
Glyma02g16740.3                                                       161   3e-40
Glyma02g16720.1                                                       157   4e-39
Glyma13g39580.1                                                       150   4e-37

>Glyma10g03080.1 
          Length = 795

 Score =  164 bits (414), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 79/126 (62%), Positives = 97/126 (76%), Gaps = 3/126 (2%)

Query: 31  ESSLSFYQVDAFTDSAFMGNPAAVCLLEDEKNEKWLQAVATEFNLSETCYLTRITDGE-- 88
           +  + ++ VDAFT+SAF GNPAAVCLLE+EK + W+Q VATEFNLSETCYLT I + E  
Sbjct: 504 KKPVKYFVVDAFTESAFKGNPAAVCLLEEEKEDSWMQGVATEFNLSETCYLTPIAESERS 563

Query: 89  TVSSNPRFHLRWFTPVAEIRLCGHATLAASHILFSNGWVNSSTIEFVTLSGFLIAKKVTE 148
            +S N RF LRWFTP  E+ LCGHATLA++H+LFS+G V S  IEFVTLSG L AKKV+ 
Sbjct: 564 DISLN-RFRLRWFTPATEVELCGHATLASAHVLFSSGLVKSDIIEFVTLSGVLTAKKVSG 622

Query: 149 ISNREA 154
           I++ E 
Sbjct: 623 INDGEG 628


>Glyma02g16740.1 
          Length = 302

 Score =  163 bits (413), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 73/113 (64%), Positives = 91/113 (80%)

Query: 38  QVDAFTDSAFMGNPAAVCLLEDEKNEKWLQAVATEFNLSETCYLTRITDGETVSSNPRFH 97
           QVDAFT+S F GNPAAVC LE+++++KWLQ VA EFNLS TCYLTRIT+    +S PRF 
Sbjct: 13  QVDAFTESVFKGNPAAVCFLEEKRDKKWLQGVAAEFNLSVTCYLTRITESHGTTSYPRFD 72

Query: 98  LRWFTPVAEIRLCGHATLAASHILFSNGWVNSSTIEFVTLSGFLIAKKVTEIS 150
           LRWFTPV+EI LCGHATLAA+H +FS+G V++  +EFV +SG L AKK+  I+
Sbjct: 73  LRWFTPVSEINLCGHATLAAAHTIFSSGLVDTDVVEFVAISGILTAKKIPAIN 125


>Glyma02g16740.2 
          Length = 301

 Score =  161 bits (407), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 72/112 (64%), Positives = 90/112 (80%)

Query: 39  VDAFTDSAFMGNPAAVCLLEDEKNEKWLQAVATEFNLSETCYLTRITDGETVSSNPRFHL 98
           VDAFT+S F GNPAAVC LE+++++KWLQ VA EFNLS TCYLTRIT+    +S PRF L
Sbjct: 13  VDAFTESVFKGNPAAVCFLEEKRDKKWLQGVAAEFNLSVTCYLTRITESHGTTSYPRFDL 72

Query: 99  RWFTPVAEIRLCGHATLAASHILFSNGWVNSSTIEFVTLSGFLIAKKVTEIS 150
           RWFTPV+EI LCGHATLAA+H +FS+G V++  +EFV +SG L AKK+  I+
Sbjct: 73  RWFTPVSEINLCGHATLAAAHTIFSSGLVDTDVVEFVAISGILTAKKIPAIN 124


>Glyma02g16740.3 
          Length = 218

 Score =  161 bits (407), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 72/112 (64%), Positives = 90/112 (80%)

Query: 39  VDAFTDSAFMGNPAAVCLLEDEKNEKWLQAVATEFNLSETCYLTRITDGETVSSNPRFHL 98
           VDAFT+S F GNPAAVC LE+++++KWLQ VA EFNLS TCYLTRIT+    +S PRF L
Sbjct: 13  VDAFTESVFKGNPAAVCFLEEKRDKKWLQGVAAEFNLSVTCYLTRITESHGTTSYPRFDL 72

Query: 99  RWFTPVAEIRLCGHATLAASHILFSNGWVNSSTIEFVTLSGFLIAKKVTEIS 150
           RWFTPV+EI LCGHATLAA+H +FS+G V++  +EFV +SG L AKK+  I+
Sbjct: 73  RWFTPVSEINLCGHATLAAAHTIFSSGLVDTDVVEFVAISGILTAKKIPAIN 124


>Glyma02g16720.1 
          Length = 307

 Score =  157 bits (397), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 77/128 (60%), Positives = 93/128 (72%), Gaps = 7/128 (5%)

Query: 31  ESSLSFYQVDAFTDSAFMGNPAAVCLLEDEKNEKWLQAVATEFNLSETCYLTRITDGE-- 88
           + S+ +Y VDAFTDSAF GNPAAVC LE+E++E+WLQAVATEFN+  TCYLTRI +    
Sbjct: 3   KKSVKYYVVDAFTDSAFKGNPAAVCFLEEERDEEWLQAVATEFNVPVTCYLTRIAESHHN 62

Query: 89  -----TVSSNPRFHLRWFTPVAEIRLCGHATLAASHILFSNGWVNSSTIEFVTLSGFLIA 143
                  S+ PRFHLRWFT   E++LCGHATLAA+H LFS G VN + IEF T SG L  
Sbjct: 63  LNSFRGTSNIPRFHLRWFTHTNEVKLCGHATLAAAHTLFSYGLVNFNIIEFFTASGVLTT 122

Query: 144 KKVTEISN 151
           KK+  I+N
Sbjct: 123 KKIPPINN 130


>Glyma13g39580.1 
          Length = 302

 Score =  150 bits (380), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/116 (67%), Positives = 95/116 (81%)

Query: 34  LSFYQVDAFTDSAFMGNPAAVCLLEDEKNEKWLQAVATEFNLSETCYLTRITDGETVSSN 93
           + +Y VDAFT+SAF GNPA+VC LE+E++E+WLQAVA EFN+SETCYL+RIT      SN
Sbjct: 8   VKYYVVDAFTESAFKGNPASVCFLEEERDEEWLQAVAAEFNISETCYLSRITHSLHGISN 67

Query: 94  PRFHLRWFTPVAEIRLCGHATLAASHILFSNGWVNSSTIEFVTLSGFLIAKKVTEI 149
           PRF LRWFTPVAE++LCGHATLAA+H LFS+  V++  IEFVTLSG L AKK+  I
Sbjct: 68  PRFRLRWFTPVAEVKLCGHATLAAAHALFSSDLVDTDVIEFVTLSGVLTAKKIPAI 123