Jatropha Genome Database

JcCB0130751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0130751.10 + phase: 2 /pseudo/partial
         (272 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g16720.1                                                       303   1e-82
Glyma02g16740.1                                                       293   2e-79
Glyma02g16740.2                                                       293   2e-79
Glyma13g39580.1                                                       275   3e-74
Glyma10g03080.1                                                       265   4e-71
Glyma12g30310.1                                                       214   1e-55
Glyma02g16740.3                                                       112   5e-25
Glyma11g20150.1                                                        51   1e-06

>Glyma02g16720.1 
          Length = 307

 Score =  303 bits (776), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 147/224 (65%), Positives = 173/224 (77%), Gaps = 9/224 (4%)

Query: 58  TQIKLCAHATLAASHTLFSNNLVNSNIIEFATLSGILTAKKIPETSNDKS---------K 108
            ++KLC HATLAA+HTLFS  LVN NIIEF T SG+LT KKIP  +N  S         +
Sbjct: 84  NEVKLCGHATLAAAHTLFSYGLVNFNIIEFFTASGVLTTKKIPPINNCTSGSNLQNGVAR 143

Query: 109 EGFLIELDFPVVPTIEFNSVDLAPISKALNGASIIDIKRTAVSDDLFIVVPSAKVVTELE 168
           +GF IELD P  P IEFN  + + IS ALNGASI+DIKRT + DD+ +VV S + VTE++
Sbjct: 144 DGFYIELDLPAHPIIEFNCDESSQISGALNGASIVDIKRTLIGDDILVVVTSGENVTEVQ 203

Query: 169 PQFDEVLKLPGRGLIVTGVAPSDSGFDFYSRFFCPKMGVNEDPVCGSAHCSIAPYWSKKL 228
           PQFD + K PGRG+IV+G+AP  SGFDFYSRFFCPK GVNED VCGSAHC++A YWSKKL
Sbjct: 204 PQFDAISKCPGRGIIVSGIAPPGSGFDFYSRFFCPKDGVNEDHVCGSAHCALASYWSKKL 263

Query: 229 GKCDFMAYQASARGGILDIHFDEQKQRVLLRGKAVSVMEGCLFV 272
           GKCDF AYQAS RGGIL+IH DEQ +RVLLRGKAV +MEGC+ V
Sbjct: 264 GKCDFNAYQASPRGGILNIHLDEQNKRVLLRGKAVIMMEGCVLV 307


>Glyma02g16740.1 
          Length = 302

 Score =  293 bits (749), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 142/224 (63%), Positives = 177/224 (79%), Gaps = 8/224 (3%)

Query: 57  MTQIKLCAHATLAASHTLFSNNLVNSNIIEFATLSGILTAKKIP--------ETSNDKSK 108
           +++I LC HATLAA+HT+FS+ LV+++++EF  +SGILTAKKIP        +    +++
Sbjct: 79  VSEINLCGHATLAAAHTIFSSGLVDTDVVEFVAISGILTAKKIPAINITSASDLQKGEAQ 138

Query: 109 EGFLIELDFPVVPTIEFNSVDLAPISKALNGASIIDIKRTAVSDDLFIVVPSAKVVTELE 168
           +GF +EL+FP  P +EFN  + + IS ALNGASIIDIKRT    DL +VV S +VV EL+
Sbjct: 139 DGFYVELNFPADPVVEFNFDETSQISGALNGASIIDIKRTQDGGDLVVVVTSGRVVEELQ 198

Query: 169 PQFDEVLKLPGRGLIVTGVAPSDSGFDFYSRFFCPKMGVNEDPVCGSAHCSIAPYWSKKL 228
           PQ D ++K PGRGLIVTG+AP  S FDF SRFFCPK+GVNEDPVCG AHC++APYWSKKL
Sbjct: 199 PQLDAIVKCPGRGLIVTGIAPPGSEFDFCSRFFCPKLGVNEDPVCGGAHCALAPYWSKKL 258

Query: 229 GKCDFMAYQASARGGILDIHFDEQKQRVLLRGKAVSVMEGCLFV 272
           GKCDF AYQASARGG+L++H DEQ QRVLLRGKAV VMEGC+ V
Sbjct: 259 GKCDFKAYQASARGGVLNVHLDEQNQRVLLRGKAVKVMEGCVLV 302


>Glyma02g16740.2 
          Length = 301

 Score =  293 bits (749), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 142/224 (63%), Positives = 177/224 (79%), Gaps = 8/224 (3%)

Query: 57  MTQIKLCAHATLAASHTLFSNNLVNSNIIEFATLSGILTAKKIP--------ETSNDKSK 108
           +++I LC HATLAA+HT+FS+ LV+++++EF  +SGILTAKKIP        +    +++
Sbjct: 78  VSEINLCGHATLAAAHTIFSSGLVDTDVVEFVAISGILTAKKIPAINITSASDLQKGEAQ 137

Query: 109 EGFLIELDFPVVPTIEFNSVDLAPISKALNGASIIDIKRTAVSDDLFIVVPSAKVVTELE 168
           +GF +EL+FP  P +EFN  + + IS ALNGASIIDIKRT    DL +VV S +VV EL+
Sbjct: 138 DGFYVELNFPADPVVEFNFDETSQISGALNGASIIDIKRTQDGGDLVVVVTSGRVVEELQ 197

Query: 169 PQFDEVLKLPGRGLIVTGVAPSDSGFDFYSRFFCPKMGVNEDPVCGSAHCSIAPYWSKKL 228
           PQ D ++K PGRGLIVTG+AP  S FDF SRFFCPK+GVNEDPVCG AHC++APYWSKKL
Sbjct: 198 PQLDAIVKCPGRGLIVTGIAPPGSEFDFCSRFFCPKLGVNEDPVCGGAHCALAPYWSKKL 257

Query: 229 GKCDFMAYQASARGGILDIHFDEQKQRVLLRGKAVSVMEGCLFV 272
           GKCDF AYQASARGG+L++H DEQ QRVLLRGKAV VMEGC+ V
Sbjct: 258 GKCDFKAYQASARGGVLNVHLDEQNQRVLLRGKAVKVMEGCVLV 301


>Glyma13g39580.1 
          Length = 302

 Score =  275 bits (704), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 136/225 (60%), Positives = 180/225 (80%), Gaps = 9/225 (4%)

Query: 57  MTQIKLCAHATLAASHTLFSNNLVNSNIIEFATLSGILTAKKIP--------ETSNDKSK 108
           + ++KLC HATLAA+H LFS++LV++++IEF TLSG+LTAKKIP        ++ N +++
Sbjct: 78  VAEVKLCGHATLAAAHALFSSDLVDTDVIEFVTLSGVLTAKKIPAIHITSASDSQNGEAQ 137

Query: 109 EGFLIELDFPVVPTIEFN-SVDLAPISKALNGASIIDIKRTAVSDDLFIVVPSAKVVTEL 167
           +GF IELDFPV P  EF+     + +S+ALNGASIID+KRT + DDL + + S K V+EL
Sbjct: 138 DGFYIELDFPVDPVTEFSFDESTSLLSEALNGASIIDVKRTQIGDDLLVELTSVKAVSEL 197

Query: 168 EPQFDEVLKLPGRGLIVTGVAPSDSGFDFYSRFFCPKMGVNEDPVCGSAHCSIAPYWSKK 227
           +P+ D +++ PGRG+IV+ +AP  SGFDFYSRFFCPK+G+NEDPVCGSAHC++A YWS K
Sbjct: 198 QPKLDAIVRCPGRGVIVSAIAPPGSGFDFYSRFFCPKLGINEDPVCGSAHCALASYWSNK 257

Query: 228 LGKCDFMAYQASARGGILDIHFDEQKQRVLLRGKAVSVMEGCLFV 272
           LGK D  AYQAS+RGG+L+IH DE+ QRVLLRGKAV+VMEGC+ V
Sbjct: 258 LGKFDLNAYQASSRGGVLNIHLDEKIQRVLLRGKAVTVMEGCVLV 302


>Glyma10g03080.1 
          Length = 795

 Score =  265 bits (677), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 120/217 (55%), Positives = 162/217 (74%), Gaps = 2/217 (0%)

Query: 58  TQIKLCAHATLAASHTLFSNNLVNSNIIEFATLSGILTAKKIPETSNDK--SKEGFLIEL 115
           T+++LC HATLA++H LFS+ LV S+IIEF TLSG+LTAKK+   ++ +  S++G  IEL
Sbjct: 579 TEVELCGHATLASAHVLFSSGLVKSDIIEFVTLSGVLTAKKVSGINDGEGASEDGLFIEL 638

Query: 116 DFPVVPTIEFNSVDLAPISKALNGASIIDIKRTAVSDDLFIVVPSAKVVTELEPQFDEVL 175
           DFP     EFNS D++ IS ALN A IIDIKRT V D L + + S K V EL+P    + 
Sbjct: 639 DFPADTVTEFNSADISQISAALNDAPIIDIKRTTVGDHLLVELASGKDVVELQPDIGAIA 698

Query: 176 KLPGRGLIVTGVAPSDSGFDFYSRFFCPKMGVNEDPVCGSAHCSIAPYWSKKLGKCDFMA 235
           K PG G++V+G AP +SGFD+Y R F PK+G+NEDP+ GSA C++APYW+KK+GKCD   
Sbjct: 699 KCPGGGILVSGTAPPESGFDYYCRTFFPKVGINEDPITGSAQCALAPYWAKKMGKCDLSV 758

Query: 236 YQASARGGILDIHFDEQKQRVLLRGKAVSVMEGCLFV 272
           Y AS RGG++ +HFD+Q +R+L+RGKAV+VM GC+ +
Sbjct: 759 YAASPRGGVVHVHFDDQSKRILMRGKAVTVMNGCVMI 795


>Glyma12g30310.1 
          Length = 181

 Score =  214 bits (544), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 112/197 (56%), Positives = 140/197 (71%), Gaps = 18/197 (9%)

Query: 60  IKLCAHATLAASHTLFSNNLVNSNIIEFATLSGILTAKKIPETSNDKSKEGFLIELDFPV 119
           +KLC HATLAA+HTLFS+ LV++N+IEF ++S +L  +      N ++++ F IELDFPV
Sbjct: 1   VKLCGHATLAAAHTLFSSGLVDTNVIEFRSISPVLHLQ------NGEAQDEFYIELDFPV 54

Query: 120 VPTIEFNSVDLAP-ISKALNGASIIDIKRTAVSDDLFIVVPSAKVVTELEPQFDEV-LKL 177
            P  EF   + A  +S ALNGASIID+KRT + DDL +VV S K V+EL+P+ D + L L
Sbjct: 55  DPVTEFRFDESASQLSGALNGASIIDLKRTQIRDDLLVVVTSGKAVSELQPKLDAIQLLL 114

Query: 178 PGRGLIVTGVAPSDSGFDFYSRFFCPKMGVNEDPVCGSAHCSIAPYWSKKLGKCDFMAYQ 237
             R L         S FD  S FFCPK G+NEDPVCGSAHC++A YWSKKLGKCDF AYQ
Sbjct: 115 QARDLT--------SIFD--SSFFCPKFGINEDPVCGSAHCALASYWSKKLGKCDFNAYQ 164

Query: 238 ASARGGILDIHFDEQKQ 254
           AS RGG+L+IH DEQ Q
Sbjct: 165 ASPRGGVLNIHLDEQIQ 181


>Glyma02g16740.3 
          Length = 218

 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 56/113 (49%), Positives = 80/113 (70%), Gaps = 8/113 (7%)

Query: 57  MTQIKLCAHATLAASHTLFSNNLVNSNIIEFATLSGILTAKKIP--------ETSNDKSK 108
           +++I LC HATLAA+HT+FS+ LV+++++EF  +SGILTAKKIP        +    +++
Sbjct: 78  VSEINLCGHATLAAAHTIFSSGLVDTDVVEFVAISGILTAKKIPAINITSASDLQKGEAQ 137

Query: 109 EGFLIELDFPVVPTIEFNSVDLAPISKALNGASIIDIKRTAVSDDLFIVVPSA 161
           +GF +EL+FP  P +EFN  + + IS ALNGASIIDIKRT    DL ++  SA
Sbjct: 138 DGFYVELNFPADPVVEFNFDETSQISGALNGASIIDIKRTQDGGDLVVIPISA 190


>Glyma11g20150.1 
          Length = 33

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/30 (73%), Positives = 26/30 (86%)

Query: 239 SARGGILDIHFDEQKQRVLLRGKAVSVMEG 268
           SAR G+L++H DEQ QRVLLRGKAV VM+G
Sbjct: 1   SARRGVLNVHLDEQNQRVLLRGKAVKVMKG 30