Jatropha Genome Database

JcCB0126561.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0126561.10 + phase: 2 /pseudo/partial
         (177 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g37270.1                                                       179   2e-45
Glyma11g08020.1                                                       176   9e-45

>Glyma01g37270.1 
          Length = 365

 Score =  179 bits (453), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 97/203 (47%), Positives = 115/203 (56%), Gaps = 46/203 (22%)

Query: 20  PIQLLKTTPFHPKSPYAVLKCVAHWYTVNYHEAYRLFACNRTLFNHEAMQKRCG*FCNKK 79
           P    +TTPFHP+SPYA  KC AHWYTVNY EAY LFACN  LFNHE+ ++       K 
Sbjct: 162 PPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYSLFACNGILFNHESPRRGENFVTRKI 221

Query: 80  SRTI-------------------------------MWW------PRRSRIRWRNWH---- 98
           +R +                               MW       P    +     H    
Sbjct: 222 TRAVGRIKVGLQSKLFLGNLQASRDWGFAGDYVEAMWLMLQQDKPDDYVVATEESHTVEE 281

Query: 99  -----LGILALN*KDHVVIDKRYFRPAEVDNLKGDSSNARKVLGWKPKVGFEQLVKTMVD 153
                 G + LN +DHVVIDKRYFRPAEVDNLKGD+S A+KVLGWKPKVGFEQLVK MVD
Sbjct: 282 FLEVAFGYVGLNWRDHVVIDKRYFRPAEVDNLKGDASKAKKVLGWKPKVGFEQLVKMMVD 341

Query: 154 EDIEFAKREKMLVDVGYMVVRKH 176
           +DIE AK+EK+LVD GY+  ++ 
Sbjct: 342 QDIEMAKKEKVLVDAGYIDAQQQ 364


>Glyma11g08020.1 
          Length = 365

 Score =  176 bits (447), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 96/203 (47%), Positives = 114/203 (56%), Gaps = 46/203 (22%)

Query: 20  PIQLLKTTPFHPKSPYAVLKCVAHWYTVNYHEAYRLFACNRTLFNHEAMQKRCG*FCNKK 79
           P    +TTPFHP+SPYA  KC AHWYTVNY EAY LFACN  LFNHE+ ++       K 
Sbjct: 162 PPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYSLFACNGILFNHESPRRGENFVTRKI 221

Query: 80  SRTI-------------------------------MWW------PRRSRIRWRNWH---- 98
           +R +                               MW       P    +     H    
Sbjct: 222 TRAVGRIKVGLQSKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEESHTVEE 281

Query: 99  -----LGILALN*KDHVVIDKRYFRPAEVDNLKGDSSNARKVLGWKPKVGFEQLVKTMVD 153
                 G + LN +DHVVIDKRYFRP+EVDNLKGD+S A+KVLGWKPKVGFEQLVK MVD
Sbjct: 282 FLEVAFGYVGLNWRDHVVIDKRYFRPSEVDNLKGDASKAKKVLGWKPKVGFEQLVKMMVD 341

Query: 154 EDIEFAKREKMLVDVGYMVVRKH 176
            DIE AK+EK+LVD GY+  ++ 
Sbjct: 342 RDIEMAKKEKVLVDAGYIDAQQQ 364