Jatropha Genome Database

JcCB0126381.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0126381.10 - phase: 0 
         (253 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g28530.1                                                       452   e-127
Glyma18g51440.1                                                       449   e-126
Glyma03g06750.1                                                       157   1e-38
Glyma20g11110.1                                                       129   4e-30
Glyma07g27550.1                                                       119   3e-27
Glyma05g24030.1                                                        67   2e-11

>Glyma08g28530.1 
          Length = 495

 Score =  452 bits (1162), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 218/249 (87%), Positives = 235/249 (94%)

Query: 1   MGAGLAMSPGDIAFKSNFATLDEKTGIVTSRRADRHFEEEGPILCEALDRMKLPSYPQYE 60
           MGAGLAMSPGDIAFKSNFATLDEKTGIVTSRRADRHFEEEGPILC ALD +KLPS+PQYE
Sbjct: 89  MGAGLAMSPGDIAFKSNFATLDEKTGIVTSRRADRHFEEEGPILCAALDGLKLPSFPQYE 148

Query: 61  VRVRYATEHRCGVVVKGPRLSGNISGTDPLKDNRLLLQAEALDDTDEARHTAAVVNELSR 120
           VRVRYATEHRCGVVVKGP LSGNISGTDPLKDNRLLL+AEALDD+ EAR+TAAVVNELS+
Sbjct: 149 VRVRYATEHRCGVVVKGPNLSGNISGTDPLKDNRLLLKAEALDDSHEARNTAAVVNELSK 208

Query: 121 EISRILISHPVNAKRAAEGKNIANVVLLRGCGIRIEVPSFEKKHGLWPCMVAPTKIIAGL 180
           EI++IL+SHPVNAKRAA+GKNIANVVLLRGCGIRIEV  F  +HGLWPCMVAPTKIIAGL
Sbjct: 209 EITKILVSHPVNAKRAAKGKNIANVVLLRGCGIRIEVTPFLNRHGLWPCMVAPTKIIAGL 268

Query: 181 GLSLDIDILEAPGATGDYRTILTSKATAIAKALSAPLQSSPSVFVPGEDEHKPGRTDGYD 240
           GLSL IDIL+APGATGDYRT+LTSKA+AI+KALSAPLQS P VFVPGEDE K GR+DGYD
Sbjct: 269 GLSLGIDILDAPGATGDYRTLLTSKASAISKALSAPLQSCPRVFVPGEDELKAGRSDGYD 328

Query: 241 FGFLHIKVL 249
           FGFLHIK +
Sbjct: 329 FGFLHIKAI 337


>Glyma18g51440.1 
          Length = 496

 Score =  449 bits (1156), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 219/249 (87%), Positives = 234/249 (93%)

Query: 1   MGAGLAMSPGDIAFKSNFATLDEKTGIVTSRRADRHFEEEGPILCEALDRMKLPSYPQYE 60
           MGAGLAMSPGDIAFKSNFATLDEKTGIVTSRRADRHFEEEGP+LC ALD MKLPS+PQYE
Sbjct: 89  MGAGLAMSPGDIAFKSNFATLDEKTGIVTSRRADRHFEEEGPLLCAALDGMKLPSFPQYE 148

Query: 61  VRVRYATEHRCGVVVKGPRLSGNISGTDPLKDNRLLLQAEALDDTDEARHTAAVVNELSR 120
           VRVRYATEHRCGVVVKGP LSGNISGTDPLKDNRLLL+AEALDD+ EAR+TAAVVNELS+
Sbjct: 149 VRVRYATEHRCGVVVKGPNLSGNISGTDPLKDNRLLLKAEALDDSHEARNTAAVVNELSK 208

Query: 121 EISRILISHPVNAKRAAEGKNIANVVLLRGCGIRIEVPSFEKKHGLWPCMVAPTKIIAGL 180
           EI++IL+SHPVNAKRAAEGKNIANVVLLRGCGIRIEV  F  +HGL PCMVAPTKIIAGL
Sbjct: 209 EITKILVSHPVNAKRAAEGKNIANVVLLRGCGIRIEVTPFINRHGLRPCMVAPTKIIAGL 268

Query: 181 GLSLDIDILEAPGATGDYRTILTSKATAIAKALSAPLQSSPSVFVPGEDEHKPGRTDGYD 240
           GLSL IDIL+APGATGDYRT+LTSKA+AIAKALSAPLQS P VFVPGEDE K GR+DGYD
Sbjct: 269 GLSLGIDILDAPGATGDYRTLLTSKASAIAKALSAPLQSCPRVFVPGEDELKAGRSDGYD 328

Query: 241 FGFLHIKVL 249
           FGFLHIK +
Sbjct: 329 FGFLHIKAI 337


>Glyma03g06750.1 
          Length = 200

 Score =  157 bits (397), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/185 (49%), Positives = 114/185 (61%), Gaps = 33/185 (17%)

Query: 65  YATEHRCGVVVKGPRLSGNISGTDPLKDNRLLLQAEALDDTDEARHTAAVVNELSREISR 124
           YA E RCGVVVKG   SGNI+GT PLKDN +LL A ALDD++E R+T AVVNELS+E+ +
Sbjct: 48  YAAEDRCGVVVKGANRSGNIAGTCPLKDNDILLTARALDDSNEVRNTIAVVNELSKEMRQ 107

Query: 125 ILISHPVNAKRAAEGKNIANVVLLRGCGIRIEVPSFEKKHGLWPCMVAPTKIIAGLGLSL 184
           IL+SHP N K A  GKNIA+V              F  +H LWPCM+AP K+I GL LSL
Sbjct: 108 ILLSHPANPKCALGGKNIASVT------------PFLNRHHLWPCMLAPIKVIVGLRLSL 155

Query: 185 DIDILEAPGATGDYRTILTSKATAIAKALSAPLQSSPSVFVPGEDEHKPGRTDGYDFGFL 244
            +DIL++ G T  + T+LTSK +A  K                      G++ GYDF FL
Sbjct: 156 GVDILDSCGTTATHATLLTSKGSATTKG---------------------GQSHGYDFPFL 194

Query: 245 HIKVL 249
           HIK +
Sbjct: 195 HIKAI 199


>Glyma20g11110.1 
          Length = 202

 Score =  129 bits (323), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 61/82 (74%), Positives = 72/82 (87%)

Query: 64  RYATEHRCGVVVKGPRLSGNISGTDPLKDNRLLLQAEALDDTDEARHTAAVVNELSREIS 123
           RYATEHRC VVVKGP LSGNISGT+PLKDN +LL+ EALDD+ EAR+  AVVNELS+EI+
Sbjct: 50  RYATEHRCRVVVKGPNLSGNISGTEPLKDNHILLKVEALDDSHEARNIVAVVNELSKEIT 109

Query: 124 RILISHPVNAKRAAEGKNIANV 145
           + L+SHPVNAK  A+GKNIAN+
Sbjct: 110 KNLVSHPVNAKCTAKGKNIANL 131


>Glyma07g27550.1 
          Length = 68

 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 57/68 (83%), Positives = 66/68 (97%)

Query: 89  PLKDNRLLLQAEALDDTDEARHTAAVVNELSREISRILISHPVNAKRAAEGKNIANVVLL 148
           PLKDN +LL+AEALDD+ EAR++AAVVNELS+EI++IL+SHPVNAKRAAEGKNIANVVLL
Sbjct: 1   PLKDNHILLKAEALDDSHEARNSAAVVNELSKEITKILVSHPVNAKRAAEGKNIANVVLL 60

Query: 149 RGCGIRIE 156
           RGCGIRIE
Sbjct: 61  RGCGIRIE 68


>Glyma05g24030.1 
          Length = 41

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/41 (75%), Positives = 33/41 (80%)

Query: 207 TAIAKALSAPLQSSPSVFVPGEDEHKPGRTDGYDFGFLHIK 247
           +  AKALSAP QS P VF PGEDE K GR+DGYDFGFLHIK
Sbjct: 1   SVTAKALSAPSQSCPRVFAPGEDELKAGRSDGYDFGFLHIK 41