Jatropha Genome Database

JcCB0125761.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0125761.10 + phase: 0 /partial
         (209 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g45120.1                                                       112   3e-25
Glyma14g03630.1                                                       108   3e-24

>Glyma02g45120.1 
          Length = 1307

 Score =  112 bits (280), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 81/236 (34%), Positives = 118/236 (50%), Gaps = 36/236 (15%)

Query: 1    MNIFVNGINLNLSSKPASADQLVAGSIILASLCAALDRIEFICEASYNLLWIQKYDIDIL 60
            +N F++ +N  +SS  AS++QL A SIILAS+CAA D + FIC+ASY++L   K+D  ++
Sbjct: 956  VNDFLDCVN-QVSSDVASSEQLAAASIILASVCAATDYVGFICDASYHILQSCKWDSLMV 1014

Query: 61   LAALHVFAYLGGDKFFSMKEYNLTMKVLKSIIIFLEGHXXXXXXXXXXXXXXXXGMKFHP 120
            L  LH+FAYLGG+KFF+M  + L + VLKS+++FLE                   +    
Sbjct: 1015 LTILHIFAYLGGEKFFNMDNFGLMVTVLKSLVMFLEDESPSVASACLPSINQ---LHAEL 1071

Query: 121  CG--KCPF--DAVSVDMVVSELLEKFQSCALSVS--MHQHKD---------------NAK 159
            C   KCPF     S+D V   LLE+ +   LS S  M  + D               N  
Sbjct: 1072 CMNVKCPFLEGVESIDAVACLLLEEIKRINLSDSRLMSDNYDAELWYNQDAIQYALRNVN 1131

Query: 160  QCS-----------SHEEDWEWTCGKIISGLPKILGRPMPDDFXXXXXXLIGQVGR 204
             C            S++  W W   K++  L  IL   + ++F      L+GQ+GR
Sbjct: 1132 FCRLNDVLSLVELVSNKMSWHWADIKLVPQLLNILDSCVEENFAVRIIVLLGQLGR 1187


>Glyma14g03630.1 
          Length = 1431

 Score =  108 bits (271), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 81/257 (31%), Positives = 120/257 (46%), Gaps = 58/257 (22%)

Query: 2    NIFVNGINLNLSSKPASADQLVAGSIILASLCAALDRIEFICEASYNLLWIQKYDIDILL 61
            N F++ +N  +SS  AS++QLVA SIILAS+CAA D + FIC+ASY++L   K+D  ++L
Sbjct: 1082 NDFLDCVN-EVSSNVASSEQLVAASIILASVCAATDYVGFICDASYHILQSCKWDSLMVL 1140

Query: 62   AALHVFAYLGGDKFFSMKEYNLTMKVLKSIIIFLEGHXXXXXXXXXXXXXXXXGMKFHPC 121
              LH+FAYLGG+KFF++  + L + VLKS+I+FLE                   +    C
Sbjct: 1141 TILHIFAYLGGEKFFNIDNFGLMVTVLKSLIMFLEDESPSVASACLPSINQ---LHAELC 1197

Query: 122  G--KCPFD--AVSVDMVVSELLEKFQSCALSVS---------MHQHKDNAKQCS------ 162
               KCPF   A S+D VV  LLE+ +   LS S            +   A QC+      
Sbjct: 1198 MNVKCPFSEGAESIDAVVCLLLEEIKRINLSDSGLMSDNYNDRQWYNQGAVQCAISKNCD 1257

Query: 163  -----------------------------------SHEEDWEWTCGKIISGLPKILGRPM 187
                                               +++  W W   K++  L  +L   +
Sbjct: 1258 VPCLKKCLISATQPDALMNVNFCRLNDVLSLVELVANKMSWHWVDMKLVPQLLNLLDSCV 1317

Query: 188  PDDFXXXXXXLIGQVGR 204
             ++F      L+GQ+GR
Sbjct: 1318 EENFAVRIIVLLGQLGR 1334