Jatropha Genome Database

JcCB0125691.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0125691.10 + phase: 0 /pseudo
         (202 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g21030.1                                                       216   1e-56
Glyma18g19360.1                                                       206   2e-53
Glyma05g02230.1                                                       206   2e-53
Glyma08g39370.1                                                       201   5e-52
Glyma17g09700.1                                                       187   5e-48
Glyma06g19320.1                                                       144   6e-35
Glyma06g19300.1                                                        69   3e-12
Glyma02g37030.1                                                        64   1e-10

>Glyma13g21030.1 
          Length = 940

 Score =  216 bits (550), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 107/171 (62%), Positives = 135/171 (78%), Gaps = 3/171 (1%)

Query: 11  VSGSLIKVVYFSRNRDSSVDHKGESSSNDNPGVFNGNRKH-TVLKGKLHFAKFETSKIND 69
           + GSLIK+VYFSR+ D S D K + S  +  G+ NGNR+   +L G+LHF KFET KIN+
Sbjct: 77  IGGSLIKLVYFSRHEDQSADDKRKRSVKERLGLSNGNRRSFPILGGRLHFVKFETRKINE 136

Query: 70  CLEFISSKKHHLGGFQ-HHENPAKDKK-FIKATGGGAYKFAELFKEKLGIGLDKEDEMDC 127
           CL+FI SK+ H GG + H+ +   D+   IKATGGGAYK+A+L KE+LG+ LDKEDEM+C
Sbjct: 137 CLDFIYSKQLHCGGLESHYSDGVTDQNGIIKATGGGAYKYADLLKERLGVSLDKEDEMNC 196

Query: 128 LVAGANFLLKAVPREVYTYVDGHKEFLQIDHNDLYPYLLVNIGSGVSMIKV 178
           LVAGANFLLKA+  E +T+++GHKEF+QID NDL+PYLLVNIGSGVSMIKV
Sbjct: 197 LVAGANFLLKAIRHEAFTHMEGHKEFVQIDPNDLFPYLLVNIGSGVSMIKV 247


>Glyma18g19360.1 
          Length = 417

 Score =  206 bits (523), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 103/168 (61%), Positives = 126/168 (75%)

Query: 11  VSGSLIKVVYFSRNRDSSVDHKGESSSNDNPGVFNGNRKHTVLKGKLHFAKFETSKINDC 70
           + GSL K+VYF+++ D  VD +   S        NG++++ VL G+L+F KFETSKINDC
Sbjct: 27  IGGSLAKLVYFTKDDDHLVDGEEGISHRKAFEKSNGSKQYPVLNGRLNFKKFETSKINDC 86

Query: 71  LEFISSKKHHLGGFQHHENPAKDKKFIKATGGGAYKFAELFKEKLGIGLDKEDEMDCLVA 130
           +EFI S K H+GG Q  ENP      IKATGGGAYK+A+LFKE+LGI  DKEDEMDCLVA
Sbjct: 87  IEFIKSMKLHIGGSQPQENPGSQSIAIKATGGGAYKYADLFKERLGIIFDKEDEMDCLVA 146

Query: 131 GANFLLKAVPREVYTYVDGHKEFLQIDHNDLYPYLLVNIGSGVSMIKV 178
           GANFLL+ V +E +TY+   K+F+QID NDLYPYLLVNIGSGV MIKV
Sbjct: 147 GANFLLEVVHQEAFTYMGDQKQFVQIDQNDLYPYLLVNIGSGVGMIKV 194


>Glyma05g02230.1 
          Length = 323

 Score =  206 bits (523), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 108/172 (62%), Positives = 135/172 (78%), Gaps = 4/172 (2%)

Query: 11  VSGSLIKVVYFSRNRDSSVDHKGESSSNDNPGVF-NGNRK-HTVLKGKLHFAKFETSKIN 68
           + GSLIK+VYFSR+RD S   K   + N+  G   NGNR+ + +L G+LHF KFETSKIN
Sbjct: 44  IGGSLIKLVYFSRHRDQSTYDKRMINVNNRLGFPPNGNRRSYPILGGRLHFVKFETSKIN 103

Query: 69  DCLEFISSKKHHLG-GFQHHENPAKDKK-FIKATGGGAYKFAELFKEKLGIGLDKEDEMD 126
           +CL+FI+SK+ H G G   + +   D    IKATGGGA+KFA+LFKE+LG+ LDKEDEM+
Sbjct: 104 ECLDFINSKQLHCGEGESRYSDATTDSNAIIKATGGGAHKFADLFKERLGLSLDKEDEMN 163

Query: 127 CLVAGANFLLKAVPREVYTYVDGHKEFLQIDHNDLYPYLLVNIGSGVSMIKV 178
           CLVAGANFLLKA+ RE +T+++G KEF+QID NDL+PYLLVNIGSGVSMIKV
Sbjct: 164 CLVAGANFLLKAIRREAFTHMEGQKEFVQIDTNDLFPYLLVNIGSGVSMIKV 215


>Glyma08g39370.1 
          Length = 413

 Score =  201 bits (510), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 101/168 (60%), Positives = 125/168 (74%)

Query: 11  VSGSLIKVVYFSRNRDSSVDHKGESSSNDNPGVFNGNRKHTVLKGKLHFAKFETSKINDC 70
           + GSL K+VYF+++ D  VD +   S        + ++++ VL GKL+F KFETS+INDC
Sbjct: 27  IGGSLAKLVYFTKDDDHLVDGEEGISHRKALEKSDSSKQYPVLNGKLNFKKFETSRINDC 86

Query: 71  LEFISSKKHHLGGFQHHENPAKDKKFIKATGGGAYKFAELFKEKLGIGLDKEDEMDCLVA 130
           +EFI S K H+GG Q  ENP      IKATGGGAYK+ +LFKE+LGI LDKEDEMDCLVA
Sbjct: 87  IEFIKSMKLHIGGSQPQENPGSQPIAIKATGGGAYKYPDLFKERLGIILDKEDEMDCLVA 146

Query: 131 GANFLLKAVPREVYTYVDGHKEFLQIDHNDLYPYLLVNIGSGVSMIKV 178
           GANFLL+ V +E +TY+   K+F+QID NDLYPYLLVNIGSGV MIKV
Sbjct: 147 GANFLLEVVHQEAFTYMGDQKQFVQIDPNDLYPYLLVNIGSGVGMIKV 194


>Glyma17g09700.1 
          Length = 910

 Score =  187 bits (476), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 107/213 (50%), Positives = 134/213 (62%), Gaps = 45/213 (21%)

Query: 11  VSGSLIKVVYFSRNRDSSV-DHKGESSSNDNPGVFNGNRK-HTVLKGKLHFAKFETSKIN 68
           + GSLIK+VYFSR++D S  D + ++  N      NGNR+ + +L G+LHF KFETSKIN
Sbjct: 53  IGGSLIKLVYFSRHQDQSTYDKRVKNVKNRLGFPPNGNRRSYPILGGRLHFVKFETSKIN 112

Query: 69  DCLEFISSKKHHLGGFQHH--------------------------------------ENP 90
           +CL+FISSK+ H  G  H                                       E+ 
Sbjct: 113 ECLDFISSKQLHSAGVPHWIAKRVLHVLILNIIYVLVQLLSDLNQFKIMDFLLFIGGESR 172

Query: 91  AKDKK-----FIKATGGGAYKFAELFKEKLGIGLDKEDEMDCLVAGANFLLKAVPREVYT 145
             D +      IKATGGGA+KFA+LFKE+LG+ LDKEDEM CLVAGANFLLKA+  E +T
Sbjct: 173 YSDARTDSNAIIKATGGGAHKFADLFKERLGLSLDKEDEMSCLVAGANFLLKAIRHEAFT 232

Query: 146 YVDGHKEFLQIDHNDLYPYLLVNIGSGVSMIKV 178
           +++G KEF+QID NDL+PYLLVNIGSGVSMIKV
Sbjct: 233 HMEGQKEFVQIDTNDLFPYLLVNIGSGVSMIKV 265


>Glyma06g19320.1 
          Length = 779

 Score =  144 bits (363), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 69/100 (69%), Positives = 86/100 (86%), Gaps = 2/100 (2%)

Query: 81  LGGFQ-HHENPAKDKK-FIKATGGGAYKFAELFKEKLGIGLDKEDEMDCLVAGANFLLKA 138
           +GG + H+ +   D+   IKATGGGAYK+A+LFKE+LG+ LDKEDEMDCLVAGANFLLKA
Sbjct: 52  IGGLESHYSDGVTDQNGIIKATGGGAYKYADLFKERLGVSLDKEDEMDCLVAGANFLLKA 111

Query: 139 VPREVYTYVDGHKEFLQIDHNDLYPYLLVNIGSGVSMIKV 178
           +  E +T+++GHKEF+QI+ NDL+PYLLVNIGSGVSMIKV
Sbjct: 112 IRHEAFTHMEGHKEFVQIEPNDLFPYLLVNIGSGVSMIKV 151


>Glyma06g19300.1 
          Length = 92

 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 52/92 (56%), Gaps = 19/92 (20%)

Query: 57  LHFAKFETSKINDCLEFISSKKHHLGGF--------QHHENPAKDKKFIK---------- 98
           LHF  FET KIN+CL+FI SK+ +  GF          H++    +   K          
Sbjct: 1   LHFVMFETRKINECLDFIRSKQLYCRGFFLFLKARLGLHKSLTWPRSLFKSLLKDVFDQL 60

Query: 99  -ATGGGAYKFAELFKEKLGIGLDKEDEMDCLV 129
            A G GAYK+ ++ KE+LGI +DKEDEM+CLV
Sbjct: 61  IAIGDGAYKYYDISKERLGISMDKEDEMECLV 92


>Glyma02g37030.1 
          Length = 225

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/44 (65%), Positives = 37/44 (84%)

Query: 135 LLKAVPREVYTYVDGHKEFLQIDHNDLYPYLLVNIGSGVSMIKV 178
           +L A+  E +T+++G KEF+QID NDL+PYLLVNIG GVSMIKV
Sbjct: 30  VLLAIRHEAFTHMEGQKEFVQIDTNDLFPYLLVNIGFGVSMIKV 73