Jatropha Genome Database

JcCB0124931.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0124931.10 + phase: 0 /pseudo/partial
         (311 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g06780.1                                                       470   e-133
Glyma02g42130.1                                                       467   e-132
Glyma20g28590.1                                                       244   6e-65
Glyma10g39300.1                                                       171   1e-42
Glyma14g13820.1                                                       140   2e-33

>Glyma14g06780.1 
          Length = 532

 Score =  470 bits (1210), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 225/302 (74%), Positives = 254/302 (84%), Gaps = 10/302 (3%)

Query: 17  LPFRCFPHSWTASPTTLGKEMAVFAVRLSEQRQEISQVKIKGKFAGAVGNYNAHIVAYPN 76
           +P     H   ASPTTLGKEMA+FA RLS +R+++SQV+I GKFAGAVGNYNAH+VAYPN
Sbjct: 229 VPMLSRTHGQPASPTTLGKEMAIFAARLSRERKDLSQVEILGKFAGAVGNYNAHVVAYPN 288

Query: 77  VNWPLIAKEFVESLGLYFNPYVTQIEPHDYMARLFQAIIVFNNILIDFDRDIWGYISLAY 136
           VNWP IA++FV SLGL FNPYV QIE HDYMA+LF ++I FNNILIDFDRD+WGYISL Y
Sbjct: 289 VNWPHIAEQFVHSLGLSFNPYVAQIETHDYMAKLFHSLIQFNNILIDFDRDVWGYISLGY 348

Query: 137 FKQITKAGEIGSSTMPHKVNPIDFENSEGNLGKANGGLSHLSEKLPISRWQE-------- 188
           FKQ TKAGEIGSSTMPHKVNPIDFENSEGNLG ANGGLSHLS KLPISRWQ         
Sbjct: 349 FKQTTKAGEIGSSTMPHKVNPIDFENSEGNLGVANGGLSHLSMKLPISRWQRDLTDSTVL 408

Query: 189 --YGEGLGHSLLAYRSALQGIGKLQVNESRLSEDLNHSWEVLAEPIQTVMRRYGVPEPYE 246
              G G+GHSLLAY+S LQGIGKLQVNE+RLSEDLN  WEVLAEPIQTVMRRYGVPEPYE
Sbjct: 409 RNMGIGIGHSLLAYKSTLQGIGKLQVNEARLSEDLNQCWEVLAEPIQTVMRRYGVPEPYE 468

Query: 247 KLKELTRGRAVTKESIREFIEGLELPKETKAYLLELSPHNYVGAAIELGKTVDVTMNLIN 306
           KLKELTRGRAVTKESIR+FIEGL++P+E K  LL+L+P  YVGAA+EL +TV+  +N + 
Sbjct: 469 KLKELTRGRAVTKESIRDFIEGLDIPEEAKNNLLKLTPDTYVGAAVELARTVENVVNTVI 528

Query: 307 GV 308
           G+
Sbjct: 529 GI 530


>Glyma02g42130.1 
          Length = 537

 Score =  467 bits (1202), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 223/302 (73%), Positives = 254/302 (84%), Gaps = 10/302 (3%)

Query: 17  LPFRCFPHSWTASPTTLGKEMAVFAVRLSEQRQEISQVKIKGKFAGAVGNYNAHIVAYPN 76
           +P     H   ASPTTLGKEMA+FA RLS +R+++SQV+I GKFAGAVGNYNAHIVAYP+
Sbjct: 234 VPMLSRTHGQPASPTTLGKEMAIFAARLSRERKDLSQVEIVGKFAGAVGNYNAHIVAYPD 293

Query: 77  VNWPLIAKEFVESLGLYFNPYVTQIEPHDYMARLFQAIIVFNNILIDFDRDIWGYISLAY 136
           VNWP IA++FV SLGL FNPYV QIE HDYMA+LF  +I FNNILIDFDRD+WGYISL Y
Sbjct: 294 VNWPHIAEQFVHSLGLSFNPYVAQIETHDYMAKLFHLLIQFNNILIDFDRDVWGYISLGY 353

Query: 137 FKQITKAGEIGSSTMPHKVNPIDFENSEGNLGKANGGLSHLSEKLPISRWQE-------- 188
           FKQ TKAGEIGSSTMPHKVNPIDFENSEGNLG ANGGLSHLS KLPISRWQ         
Sbjct: 354 FKQTTKAGEIGSSTMPHKVNPIDFENSEGNLGVANGGLSHLSMKLPISRWQRDLTDSTVL 413

Query: 189 --YGEGLGHSLLAYRSALQGIGKLQVNESRLSEDLNHSWEVLAEPIQTVMRRYGVPEPYE 246
              G G+GHSLLAY+S LQGIGKLQVNE+ LSEDLNH WEVLAEPIQTVMRRYGVPEPYE
Sbjct: 414 RNMGVGIGHSLLAYKSTLQGIGKLQVNEACLSEDLNHCWEVLAEPIQTVMRRYGVPEPYE 473

Query: 247 KLKELTRGRAVTKESIREFIEGLELPKETKAYLLELSPHNYVGAAIELGKTVDVTMNLIN 306
           KLKELTRGRAVTKESIR+FI+GL++P+E K+ +L+L+P  YVGAA+EL +TV+  +N + 
Sbjct: 474 KLKELTRGRAVTKESIRDFIKGLDIPEEAKSNMLKLTPDTYVGAAVELARTVENVVNTVI 533

Query: 307 GV 308
           G+
Sbjct: 534 GI 535


>Glyma20g28590.1 
          Length = 413

 Score =  244 bits (624), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 134/233 (57%), Positives = 154/233 (66%), Gaps = 42/233 (18%)

Query: 16  MLPFRCFPHSWTASPTTLGKEMAVFAVRLSEQRQEISQVKIKGKFAGAVGNYNAHIVAYP 75
           ++P     H   +S TTLGKEMA+FA RLS +R+E+SQV+I GKFAGAVGNYNAH VAYP
Sbjct: 196 LVPMLSHTHGQESSSTTLGKEMAIFAARLSRERKELSQVEILGKFAGAVGNYNAH-VAYP 254

Query: 76  NVNWPLIAKEFVESLGLYFNPYVTQIEPHDYMARLFQAIIVFNNILIDFDRDIWGYISLA 135
            V WP IA++F++SLGL FNPYV QIE HDYMA+LF  +I FNNI            SL 
Sbjct: 255 EVKWPHIAEQFLQSLGLIFNPYVAQIETHDYMAKLFHLLIQFNNI------------SLG 302

Query: 136 YFKQITKAGEIGSSTMPHKVNPIDFENSEGNLGKANGGLSHLSEKLPISRWQEY------ 189
           YFKQ   AGEIGSSTMPHKVNPIDFENSE NLG ANGGLSHLS KLPIS    Y      
Sbjct: 303 YFKQ---AGEIGSSTMPHKVNPIDFENSERNLGVANGGLSHLSMKLPISLHAFYLAVSLL 359

Query: 190 --------------------GEGLGHSLLAYRSALQGIGKLQVNESRLSEDLN 222
                               G G+GHSLLAY+S LQG+GKLQV  +  +  +N
Sbjct: 360 CFHSSKLERDLTDSTVLRNMGVGIGHSLLAYKSTLQGMGKLQVFSATWASGIN 412


>Glyma10g39300.1 
          Length = 302

 Score =  171 bits (432), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 97/208 (46%), Positives = 119/208 (57%), Gaps = 61/208 (29%)

Query: 100 QIEPHDYMARLFQAIIVFNNILIDFDRDIWGYISLAYFKQITKAGEIGSSTMPHKVNPID 159
           QIE HDYMA+LF  +I FNNILI+FDRD+WGYISL YF Q     ++  ST+        
Sbjct: 153 QIETHDYMAKLFHLLIQFNNILIEFDRDVWGYISLGYFNQ----RDLTDSTV-------- 200

Query: 160 FENSEGNLGKANGGLSHLSEKLPISRWQEYGEGLGHSLLAYRSALQGIGKLQVNESRLSE 219
                                      +  G G+GHSLLAY+S L+ IGKLQV       
Sbjct: 201 --------------------------LRNMGVGIGHSLLAYKSTLREIGKLQV------- 227

Query: 220 DLNHSWEVLAEPIQTVMRRYGVPEPYEKLKELTRGRAVTKESIREFIEGLELPKETKAYL 279
                           MRRYGV EPYEKLKELTRGRAVT++SIR+FIEGL +P+E K  L
Sbjct: 228 ----------------MRRYGVSEPYEKLKELTRGRAVTQKSIRDFIEGLYIPEEAKMNL 271

Query: 280 LELSPHNYVGAAIELGKTVDVTMNLING 307
           L+L+P  YVGAA+EL +TV   +N + G
Sbjct: 272 LKLTPDTYVGAAVELARTVKNVVNTVYG 299


>Glyma14g13820.1 
          Length = 164

 Score =  140 bits (353), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/114 (63%), Positives = 78/114 (68%), Gaps = 23/114 (20%)

Query: 143 AGEIGSSTMPHKVNPIDFENSEGNLGKANGGLSHLSEKLPISRWQ--------------- 187
           +GEIGSSTMPHKVNPIDFEN+EGNLG ANGG+SHLS K  ISRWQ               
Sbjct: 29  SGEIGSSTMPHKVNPIDFENNEGNLGVANGGMSHLSMKFSISRWQARPLDFDFIMLILRD 88

Query: 188 --------EYGEGLGHSLLAYRSALQGIGKLQVNESRLSEDLNHSWEVLAEPIQ 233
                     G G+GH LLAY+  LQGIGKLQVNE+RLSEDLN  WEVL EPIQ
Sbjct: 89  LTNSTILRNMGVGIGHFLLAYKITLQGIGKLQVNEARLSEDLNQCWEVLVEPIQ 142