Jatropha Genome Database

JcCB0124021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0124021.10 + phase: 0 /pseudo/partial
         (122 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g15370.1                                                       130   2e-31
Glyma12g33860.3                                                       129   5e-31
Glyma12g33860.1                                                       129   5e-31
Glyma12g33860.2                                                       129   5e-31
Glyma06g42990.1                                                       129   6e-31
Glyma13g36640.3                                                       126   4e-30
Glyma13g36640.2                                                       126   4e-30
Glyma13g36640.1                                                       126   4e-30
Glyma13g36640.4                                                       118   1e-27
Glyma14g10790.1                                                        55   1e-08
Glyma17g34730.1                                                        55   2e-08
Glyma04g10270.1                                                        51   3e-07
Glyma19g37570.2                                                        50   8e-07
Glyma19g37570.1                                                        50   8e-07
Glyma03g34890.1                                                        48   2e-06
Glyma10g07610.1                                                        48   2e-06

>Glyma12g15370.1 
          Length = 820

 Score =  130 bits (328), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 66/69 (95%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEEILSR 113
           ++ +CTLNRPWEGVPPERVVY VANEG+RL+IPEGPLGRLIS+CWAEPHERPSCEEILSR
Sbjct: 752 MWELCTLNRPWEGVPPERVVYTVANEGARLDIPEGPLGRLISECWAEPHERPSCEEILSR 811

Query: 114 LLDCEYTLC 122
           L+D EY++C
Sbjct: 812 LVDIEYSMC 820


>Glyma12g33860.3 
          Length = 815

 Score =  129 bits (325), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 59/69 (85%), Positives = 66/69 (95%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEEILSR 113
           ++ +CTLNRPWEGVPPERVVY+VANEGSRLEIPEGPLGRLIS+CWAE HERPSCEEILSR
Sbjct: 747 MWELCTLNRPWEGVPPERVVYSVANEGSRLEIPEGPLGRLISECWAECHERPSCEEILSR 806

Query: 114 LLDCEYTLC 122
           L+D EY+LC
Sbjct: 807 LVDIEYSLC 815


>Glyma12g33860.1 
          Length = 815

 Score =  129 bits (325), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 59/69 (85%), Positives = 66/69 (95%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEEILSR 113
           ++ +CTLNRPWEGVPPERVVY+VANEGSRLEIPEGPLGRLIS+CWAE HERPSCEEILSR
Sbjct: 747 MWELCTLNRPWEGVPPERVVYSVANEGSRLEIPEGPLGRLISECWAECHERPSCEEILSR 806

Query: 114 LLDCEYTLC 122
           L+D EY+LC
Sbjct: 807 LVDIEYSLC 815


>Glyma12g33860.2 
          Length = 810

 Score =  129 bits (325), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 59/69 (85%), Positives = 66/69 (95%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEEILSR 113
           ++ +CTLNRPWEGVPPERVVY+VANEGSRLEIPEGPLGRLIS+CWAE HERPSCEEILSR
Sbjct: 742 MWELCTLNRPWEGVPPERVVYSVANEGSRLEIPEGPLGRLISECWAECHERPSCEEILSR 801

Query: 114 LLDCEYTLC 122
           L+D EY+LC
Sbjct: 802 LVDIEYSLC 810


>Glyma06g42990.1 
          Length = 812

 Score =  129 bits (324), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 66/69 (95%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEEILSR 113
           ++ +CTLNRPWEGVPPERVVY VANEG+RL+IP+GPLGRLIS+CWAEPHERPSCEEILSR
Sbjct: 744 IWELCTLNRPWEGVPPERVVYTVANEGARLDIPDGPLGRLISECWAEPHERPSCEEILSR 803

Query: 114 LLDCEYTLC 122
           L+D EY++C
Sbjct: 804 LVDIEYSMC 812


>Glyma13g36640.3 
          Length = 815

 Score =  126 bits (317), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 66/69 (95%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEEILSR 113
           ++ +CTLNRPWEGVPPERVVY+VA+EGSRLEIPEGPLGRLIS+CWAE H+RPSCEEILSR
Sbjct: 747 MWELCTLNRPWEGVPPERVVYSVAHEGSRLEIPEGPLGRLISECWAECHQRPSCEEILSR 806

Query: 114 LLDCEYTLC 122
           L+D EY+LC
Sbjct: 807 LVDIEYSLC 815


>Glyma13g36640.2 
          Length = 815

 Score =  126 bits (317), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 66/69 (95%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEEILSR 113
           ++ +CTLNRPWEGVPPERVVY+VA+EGSRLEIPEGPLGRLIS+CWAE H+RPSCEEILSR
Sbjct: 747 MWELCTLNRPWEGVPPERVVYSVAHEGSRLEIPEGPLGRLISECWAECHQRPSCEEILSR 806

Query: 114 LLDCEYTLC 122
           L+D EY+LC
Sbjct: 807 LVDIEYSLC 815


>Glyma13g36640.1 
          Length = 815

 Score =  126 bits (317), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 66/69 (95%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEEILSR 113
           ++ +CTLNRPWEGVPPERVVY+VA+EGSRLEIPEGPLGRLIS+CWAE H+RPSCEEILSR
Sbjct: 747 MWELCTLNRPWEGVPPERVVYSVAHEGSRLEIPEGPLGRLISECWAECHQRPSCEEILSR 806

Query: 114 LLDCEYTLC 122
           L+D EY+LC
Sbjct: 807 LVDIEYSLC 815


>Glyma13g36640.4 
          Length = 815

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 54/65 (83%), Positives = 62/65 (95%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEEILSR 113
           ++ +CTLNRPWEGVPPERVVY+VA+EGSRLEIPEGPLGRLIS+CWAE H+RPSCEEILSR
Sbjct: 747 MWELCTLNRPWEGVPPERVVYSVAHEGSRLEIPEGPLGRLISECWAECHQRPSCEEILSR 806

Query: 114 LLDCE 118
           L+D E
Sbjct: 807 LVDIE 811


>Glyma14g10790.1 
          Length = 880

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 4/73 (5%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEG---PLGRLISDCW-AEPHERPSCEE 109
           L+ + T   PW+G+ P +VV AV  +  RLEIPE     + ++I DCW  EPH RPS  +
Sbjct: 801 LWELTTTRIPWQGLNPMQVVGAVGFQNKRLEIPEDVNPVVAQIIRDCWQTEPHLRPSFSQ 860

Query: 110 ILSRLLDCEYTLC 122
           ++SRL   ++ + 
Sbjct: 861 LMSRLYRLQHLIV 873


>Glyma17g34730.1 
          Length = 822

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEG---PLGRLISDCW-AEPHERPSCEE 109
           L+ + T   PW+G+ P +VV AV  +  RLEIPE     + ++I DCW  EPH RPS  +
Sbjct: 743 LWELTTTRIPWQGLNPMQVVGAVGFQNKRLEIPEDVNPVVAQIIRDCWQTEPHLRPSFSQ 802

Query: 110 ILSRL 114
           ++SRL
Sbjct: 803 LMSRL 807


>Glyma04g10270.1 
          Length = 929

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEG---PLGRLISDCWA-EPHERPSCEE 109
           L+ + T+ +PW G+ P +VV AVA +  RL IP      L  L+  CWA +P ERPS   
Sbjct: 849 LWELVTMQQPWNGLSPAQVVGAVAFQNRRLAIPPNISPALASLMESCWADDPSERPSFGS 908

Query: 110 ILSRL 114
           I+  L
Sbjct: 909 IVDSL 913


>Glyma19g37570.2 
          Length = 803

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 4/65 (6%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEG---PLGRLISDCWA-EPHERPSCEE 109
           L+ + TL +PW  + P +VV AV  +G RLEIP      L  +I  CWA EP +RPS   
Sbjct: 719 LWEIATLQQPWSNLNPPQVVAAVGFKGKRLEIPRDLNPQLASIIESCWANEPWKRPSFSS 778

Query: 110 ILSRL 114
           I+  L
Sbjct: 779 IMDSL 783


>Glyma19g37570.1 
          Length = 803

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 4/65 (6%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEG---PLGRLISDCWA-EPHERPSCEE 109
           L+ + TL +PW  + P +VV AV  +G RLEIP      L  +I  CWA EP +RPS   
Sbjct: 719 LWEIATLQQPWSNLNPPQVVAAVGFKGKRLEIPRDLNPQLASIIESCWANEPWKRPSFSS 778

Query: 110 ILSRL 114
           I+  L
Sbjct: 779 IMDSL 783


>Glyma03g34890.1 
          Length = 803

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 4/65 (6%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEG---PLGRLISDCWA-EPHERPSCEE 109
           L+ + TL +PW  + P +VV AV  +G RLEIP      L  +I  CWA EP +RPS   
Sbjct: 719 LWELATLQQPWSNLNPPQVVAAVGFKGKRLEIPRDLNPQLASIIEACWANEPWKRPSFSS 778

Query: 110 ILSRL 114
           I+  L
Sbjct: 779 IMDSL 783


>Glyma10g07610.1 
          Length = 793

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 4/65 (6%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEG---PLGRLISDCWA-EPHERPSCEE 109
           L+ + TL +PW  + P +VV AV  +G RLEIP      +  LI  CWA EP +RPS   
Sbjct: 696 LWELATLQQPWINLNPAQVVAAVGFKGKRLEIPHDVNPQVAALIDACWANEPWKRPSFAS 755

Query: 110 ILSRL 114
           I+  L
Sbjct: 756 IMDSL 760