Jatropha Genome Database

JcCB0123131.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0123131.10 + phase: 0 /partial
         (197 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g33090.1                                                       352   1e-97
Glyma16g22290.1                                                       345   2e-95
Glyma08g45060.1                                                       211   4e-55
Glyma18g07860.1                                                       207   5e-54

>Glyma09g33090.1 
          Length = 264

 Score =  352 bits (904), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 167/194 (86%), Positives = 184/194 (94%), Gaps = 1/194 (0%)

Query: 5   LTIFKFFAGLDIVDVLLVNKNGRFTGEAFVVFAGSMQVEFALQRDRQNMGRRYVEVFRCK 64
           + I KFFAGL IVDVLLVNK+GRF+GEAFVVFAG+MQVEFALQRDRQNMGRRYVEVFRCK
Sbjct: 71  IDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCK 130

Query: 65  RQDYYNAVAAEVNYEGIYDTDYHGS-PPPSKAKRFSDKEQLEYTEILKMRGLPFSVKKPE 123
           +QDYYNAVA E+NYEGIYD DYHGS PPPS+ KRF+DK+Q+EYTEILKMRGLPF V K +
Sbjct: 131 KQDYYNAVAGEINYEGIYDNDYHGSSPPPSRLKRFNDKDQMEYTEILKMRGLPFQVTKSQ 190

Query: 124 IIDFFKEFKLVEERIHIACRPDGKATGEAYVEFVSAEEAKRAMSKDKMTIGSRYVELFPS 183
           I++FFK+FKL+E+R+HIACRPDGKATGEAYVEFVSAEEAKRAMSKDKMTIGSRYVELFPS
Sbjct: 191 IVEFFKDFKLIEDRVHIACRPDGKATGEAYVEFVSAEEAKRAMSKDKMTIGSRYVELFPS 250

Query: 184 TPDEARRAESRSRQ 197
           TPDEARRAESRSRQ
Sbjct: 251 TPDEARRAESRSRQ 264



 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 109 ILKMRGLPFSVKKPEIIDFFKEFKLVEERIHIACRPDGKATGEAYVEFVSAEEAKRAMSK 168
           ++++RGLPF+    +I+ FF    +V+    +     G+ +GEA+V F  A + + A+ +
Sbjct: 58  VVRLRGLPFNCTDIDILKFFAGLTIVDV---LLVNKSGRFSGEAFVVFAGAMQVEFALQR 114

Query: 169 DKMTIGSRYVELF 181
           D+  +G RYVE+F
Sbjct: 115 DRQNMGRRYVEVF 127


>Glyma16g22290.1 
          Length = 264

 Score =  345 bits (885), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 164/194 (84%), Positives = 183/194 (94%), Gaps = 1/194 (0%)

Query: 5   LTIFKFFAGLDIVDVLLVNKNGRFTGEAFVVFAGSMQVEFALQRDRQNMGRRYVEVFRCK 64
           + I KFFAGL IVDVLLVNK+GRF+GEAFVVFAG+MQVEFALQRDRQNMGRRYVEVFRCK
Sbjct: 71  IDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCK 130

Query: 65  RQDYYNAVAAEVNYEGIYDTDYHGS-PPPSKAKRFSDKEQLEYTEILKMRGLPFSVKKPE 123
           +QDYYNAVAAE+ YEGIYD DY GS PPPS++KRF+DK+Q+E TEILKMRGLPF V K +
Sbjct: 131 KQDYYNAVAAEIKYEGIYDNDYQGSSPPPSRSKRFNDKDQMECTEILKMRGLPFQVTKSQ 190

Query: 124 IIDFFKEFKLVEERIHIACRPDGKATGEAYVEFVSAEEAKRAMSKDKMTIGSRYVELFPS 183
           I++FFK+FKL+E+R+HIACRPDGK+TGEAYVEFVSAEEAKRAMSKDKMTIGSRYVELFPS
Sbjct: 191 IVEFFKDFKLIEDRVHIACRPDGKSTGEAYVEFVSAEEAKRAMSKDKMTIGSRYVELFPS 250

Query: 184 TPDEARRAESRSRQ 197
           TPDEARRAESRSRQ
Sbjct: 251 TPDEARRAESRSRQ 264



 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 109 ILKMRGLPFSVKKPEIIDFFKEFKLVEERIHIACRPDGKATGEAYVEFVSAEEAKRAMSK 168
           ++++RGLPF+    +I+ FF    +V+    +     G+ +GEA+V F  A + + A+ +
Sbjct: 58  VVRLRGLPFNCTDIDILKFFAGLTIVD---VLLVNKSGRFSGEAFVVFAGAMQVEFALQR 114

Query: 169 DKMTIGSRYVELF 181
           D+  +G RYVE+F
Sbjct: 115 DRQNMGRRYVEVF 127


>Glyma08g45060.1 
          Length = 260

 Score =  211 bits (537), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 107/194 (55%), Positives = 139/194 (71%), Gaps = 11/194 (5%)

Query: 7   IFKFFAGLDIVDVLLVNKNGRFTGEAFVVFAGSMQVEFALQRDRQNMGRRYVEVFRCKRQ 66
           + +FF GLDIVDVL V+K G+FTGE F V    +QV+FALQR+RQNMGRRYVEVFR KRQ
Sbjct: 74  VAEFFHGLDIVDVLFVHKGGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQ 133

Query: 67  DYYNAVAAEVNYEGIYDTDYHGSPP---PSKAKRFSD-KEQLEYTEILKMRGLPFSVKKP 122
           +YY A+A EV       +D  G  P    S+AK + + K+  E+T +L++RGLPFS  K 
Sbjct: 134 EYYKAIANEV-------SDARGGSPRRSASRAKSYDEGKDSAEHTGVLRLRGLPFSASKD 186

Query: 123 EIIDFFKEFKLVEERIHIACRPDGKATGEAYVEFVSAEEAKRAMSKDKMTIGSRYVELFP 182
           +I++FFK+F L E+ IHI    +G+ +GEAY EF SAE++K AM KD+MT+GSRY+ELFP
Sbjct: 187 DIMEFFKDFGLPEDSIHIIMNSEGRPSGEAYAEFASAEDSKAAMVKDRMTLGSRYIELFP 246

Query: 183 STPDEARRAESRSR 196
           S+P E   A SR R
Sbjct: 247 SSPGEMEEAISRGR 260


>Glyma18g07860.1 
          Length = 261

 Score =  207 bits (528), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 107/194 (55%), Positives = 138/194 (71%), Gaps = 11/194 (5%)

Query: 7   IFKFFAGLDIVDVLLVNKNGRFTGEAFVVFAGSMQVEFALQRDRQNMGRRYVEVFRCKRQ 66
           + +FF GLDIVDVL V+K G+FTGE F V    +QV+FALQR+RQNMGRRYVEVFR KRQ
Sbjct: 75  VAEFFHGLDIVDVLFVHKGGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQ 134

Query: 67  DYYNAVAAEVNYEGIYDTDYHGSPP---PSKAKRFSD-KEQLEYTEILKMRGLPFSVKKP 122
           +YY A+A EV       +D  G  P    S+AK + + KE  E+T +L++RGLPFS  K 
Sbjct: 135 EYYKAIANEV-------SDARGGSPRRSASRAKSYDEGKESAEHTGVLRLRGLPFSASKD 187

Query: 123 EIIDFFKEFKLVEERIHIACRPDGKATGEAYVEFVSAEEAKRAMSKDKMTIGSRYVELFP 182
           +I++FFK+F L E+ IHI    +G+ +GEAY EF SAE++K AM KD+MT+GSRY+ELFP
Sbjct: 188 DIMEFFKDFGLPEDSIHIIMNSEGRPSGEAYAEFESAEDSKAAMIKDRMTLGSRYIELFP 247

Query: 183 STPDEARRAESRSR 196
           S+  E   A SR R
Sbjct: 248 SSHGEMEEAISRGR 261