Jatropha Genome Database

JcCB0121711.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0121711.20 - phase: 0 /pseudo/partial
         (216 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g39050.1                                                       270   9e-73
Glyma13g33730.1                                                       267   6e-72
Glyma10g43850.1                                                        68   6e-12
Glyma06g14820.1                                                        68   6e-12
Glyma20g38570.1                                                        67   1e-11
Glyma06g14820.3                                                        67   2e-11
Glyma04g40030.1                                                        65   5e-11
Glyma20g38580.1                                                        63   2e-10
Glyma14g11150.1                                                        52   5e-07
Glyma06g14820.2                                                        50   1e-06

>Glyma15g39050.1 
          Length = 281

 Score =  270 bits (690), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 138/205 (67%), Positives = 159/205 (77%)

Query: 12  YTEEPATNVRFQTXXXXXXXXXXXXXXGTGYREKVFAIIGVKVYAAGLYVNPSILSALDT 71
           Y EEPATNV+FQT              GTGYREKVFAIIGVKVYAAGLY++ S+   L+ 
Sbjct: 77  YVEEPATNVKFQTSLNFPGCSNSLTLFGTGYREKVFAIIGVKVYAAGLYLDQSVTQELNA 136

Query: 72  WKGQSTAEIHGNAAFFSSIFQAALEKSLQIVLVRDVDGKTFWDALDDAISPRIKAPTLVD 131
           WKGQS   I GN++ F +IFQ++ EKSLQIVLVRDVDGKTFWDAL DAISPRI  PT  D
Sbjct: 137 WKGQSKDAIQGNSSLFETIFQSSFEKSLQIVLVRDVDGKTFWDALSDAISPRIPQPTTTD 196

Query: 132 ESALSAFRSVFQDRALKKGTFIFLTWLDPSKLLICVSSDGIPSSVDATIESANVASALFD 191
           E+AL+ FR VF DR LKKG  I LTWL+PS+LL+ VSS+G PS+VDATIESANVASALF+
Sbjct: 197 ETALTTFRGVFLDRPLKKGAIIILTWLNPSRLLVSVSSNGFPSTVDATIESANVASALFN 256

Query: 192 VFFGDASVSPSLKASVTTGLATILK 216
           VF GD+ VSPSLKASV  GL+ +LK
Sbjct: 257 VFLGDSPVSPSLKASVAEGLSKVLK 281


>Glyma13g33730.1 
          Length = 281

 Score =  267 bits (682), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 136/205 (66%), Positives = 159/205 (77%)

Query: 12  YTEEPATNVRFQTXXXXXXXXXXXXXXGTGYREKVFAIIGVKVYAAGLYVNPSILSALDT 71
           Y EEPATNV+FQT              GTGYREKVFAIIGVKVYAAGLY++ SI   L+ 
Sbjct: 77  YVEEPATNVKFQTSLSFPGCSNSLTLFGTGYREKVFAIIGVKVYAAGLYLDQSIALELNA 136

Query: 72  WKGQSTAEIHGNAAFFSSIFQAALEKSLQIVLVRDVDGKTFWDALDDAISPRIKAPTLVD 131
           WKGQS   I GN++ F +IFQ++ EKSLQI+LVRDVDGKTFWDAL DAISPRI+ PT  D
Sbjct: 137 WKGQSKEAIQGNSSLFETIFQSSFEKSLQIILVRDVDGKTFWDALSDAISPRIQQPTTTD 196

Query: 132 ESALSAFRSVFQDRALKKGTFIFLTWLDPSKLLICVSSDGIPSSVDATIESANVASALFD 191
           E+AL+ FR VF DR LKKG  I LTWL+PS LL+ VSS+G+PS++DATIESANVASALF+
Sbjct: 197 ETALTTFRGVFLDRPLKKGAIIILTWLNPSGLLVSVSSNGLPSTMDATIESANVASALFN 256

Query: 192 VFFGDASVSPSLKASVTTGLATILK 216
           VF GD+ VSPSLKASV   L+ +LK
Sbjct: 257 VFLGDSPVSPSLKASVAESLSKVLK 281


>Glyma10g43850.1 
          Length = 226

 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 5/170 (2%)

Query: 52  VKVYAAGLYVNPSILSALD-TWKGQSTAEIHGNAAFFSSIFQAALEKSLQIVLVRDVDGK 110
           VK    G+Y+    +S+L   WKG+S AE+  +  F+  I +   EK ++   +R +DG+
Sbjct: 47  VKFTGIGVYLEDKAVSSLGAKWKGKSAAELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGR 106

Query: 111 TFWDALDD---AISPRIKAPTLVDESALSAFRSVFQDRALKKGTFIFLTWLDPSKLLICV 167
            +   + +   A    +   +  +E A+  FR+ F+D+    G+ +F        L +  
Sbjct: 107 EYVRKVSENCVAHMESVGTYSEAEEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTLGLSF 166

Query: 168 SSDG-IPSSVDATIESANVASALFDVFFGDASVSPSLKASVTTGLATILK 216
           S D  IP    A I++  ++ A+ +   G+  VSP+LK S+ T      K
Sbjct: 167 SKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSPALKESLATRFHQFFK 216


>Glyma06g14820.1 
          Length = 209

 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)

Query: 39  GTGYREKVFAIIGVKVYAAGLYVNPSILSALDTWKGQSTAEIHGNAAFFSSIFQAALEKS 98
           G G  +     I VK Y+ G+Y+ P ++  LD +KG+S  E+  N  FF+++  A +EK 
Sbjct: 27  GHGITDMEIHFIHVKFYSIGVYLEPEVVGHLDQFKGKSAKELEDNEEFFNALISAPVEKF 86

Query: 99  LQIVLVRDVDGKTFWDALDDAISPRIKAPTLVDESALSAFRSV---FQDRALKKGTFIFL 155
           +++V+++++ G  +   ++ A+  R+ A    +E    A   V   FQ +  KK + I  
Sbjct: 87  IRLVVIKEIKGAQYGVQIETAVRDRLAAEDKYEEEEEEALEKVIEFFQSKYFKKLSVI-- 144

Query: 156 TWLDPSK---LLICVSSDGIPSSVDATIESANVASALFDVFFGDAS 198
           T+  P+      I VS +G   S    IE+ANV  A+   + G +S
Sbjct: 145 TYHFPANSATAEIVVSLEGKEDS-KYVIENANVVEAIKKWYLGGSS 189


>Glyma20g38570.1 
          Length = 226

 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 5/170 (2%)

Query: 52  VKVYAAGLYVNPSILSALD-TWKGQSTAEIHGNAAFFSSIFQAALEKSLQIVLVRDVDGK 110
           VK    G+Y+    +S+L   WKG+S AE+  +  F+  I +   EK ++   +R +DG+
Sbjct: 47  VKFTGIGVYLEDKAVSSLAAKWKGKSAAELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGR 106

Query: 111 TFWDAL-DDAISPRIKAPTLVDES--ALSAFRSVFQDRALKKGTFIFLTWLDPSKLLICV 167
            +   + ++ ++      T  DE   A+  FR+ F+D+    G+ +F        L +  
Sbjct: 107 EYVRKVSENCVAHMQSVGTYSDEEEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTLGLSF 166

Query: 168 SSDG-IPSSVDATIESANVASALFDVFFGDASVSPSLKASVTTGLATILK 216
           S D  IP    A I++  ++ A+ +   G+  VSP+LK S+ T      K
Sbjct: 167 SKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSPALKESLATRFHQFFK 216


>Glyma06g14820.3 
          Length = 177

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 9/155 (5%)

Query: 50  IGVKVYAAGLYVNPSILSALDTWKGQSTAEIHGNAAFFSSIFQAALEKSLQIVLVRDVDG 109
           I VK Y+ G+Y+ P ++  LD +KG+S  E+  N  FF+++  A +EK +++V+++++ G
Sbjct: 6   IHVKFYSIGVYLEPEVVGHLDQFKGKSAKELEDNEEFFNALISAPVEKFIRLVVIKEIKG 65

Query: 110 KTFWDALDDAISPRIKAPTLVDESALSAFRSV---FQDRALKKGTFIFLTWLDPSK---L 163
             +   ++ A+  R+ A    +E    A   V   FQ +  KK + I  T+  P+     
Sbjct: 66  AQYGVQIETAVRDRLAAEDKYEEEEEEALEKVIEFFQSKYFKKLSVI--TYHFPANSATA 123

Query: 164 LICVSSDGIPSSVDATIESANVASALFDVFFGDAS 198
            I VS +G   S    IE+ANV  A+   + G +S
Sbjct: 124 EIVVSLEGKEDS-KYVIENANVVEAIKKWYLGGSS 157


>Glyma04g40030.1 
          Length = 209

 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)

Query: 39  GTGYREKVFAIIGVKVYAAGLYVNPSILSALDTWKGQSTAEIHGNAAFFSSIFQAALEKS 98
           G G  +     I VK Y+ G+Y+ P ++  L+ +KG S  E+  N  FF+++  A +EK 
Sbjct: 27  GHGITDMEIHFIHVKFYSIGIYLEPEVVGHLEQFKGISAKELEENDEFFNALISAPVEKF 86

Query: 99  LQIVLVRDVDGKTFWDALDDAISPRIKAPTLVDESALSAFRSV---FQDRALKKGTFIFL 155
           +++V+++++ G  +   ++ A+  R+ A    +E    A   V   FQ +  KK + I  
Sbjct: 87  IRLVVIKEIKGAQYGVQIETAVRDRLAAEDKYEEEEEEALEKVIEFFQSKYFKKHSVI-- 144

Query: 156 TWLDPSK---LLICVSSDGIPSSVDATIESANVASALFDVFFGDAS 198
           T+  P+      I VS +G   S    IE+ANV  A+   + G +S
Sbjct: 145 TYHFPTNSATAEIVVSLEGKEDS-KYVIENANVVEAVKKWYLGGSS 189


>Glyma20g38580.1 
          Length = 228

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 5/183 (2%)

Query: 39  GTGYREKVFAIIGVKVYAAGLYVNPSILSALDT-WKGQSTAEIHGNAAFFSSIFQAALEK 97
           G G R        VK  A  +Y+    LS L   WK +ST ++  +  FFS I     EK
Sbjct: 35  GAGVRGLQIHHAFVKFTAICIYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEK 94

Query: 98  SLQIVLVRDVDGKTFWDALDD---AISPRIKAPTLVDESALSAFRSVFQDRALKKGTFIF 154
            +Q+ +++ + G+ + + + +   AI   +   T  +  A+  F SVF+D     G+ I 
Sbjct: 95  FMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFLSVFKDLTFPPGSSIL 154

Query: 155 LTWLDPSKLLICVSSD-GIPSSVDATIESANVASALFDVFFGDASVSPSLKASVTTGLAT 213
            T      L I  S D  IP    A IE+  ++ A+ +   G   VSP+ K S+ + L+ 
Sbjct: 155 FTVSPNGSLTISFSGDETIPEVTSAVIENKLLSEAVLESMIGKNGVSPAAKQSLASRLSH 214

Query: 214 ILK 216
           + K
Sbjct: 215 LFK 217


>Glyma14g11150.1 
          Length = 175

 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 10/175 (5%)

Query: 46  VFAIIGVKVYAAGLYVNP-SILSALD-TWKGQSTAEIHGNAAFFSSIFQAALEKSLQIVL 103
           +  I  +KVYA G+YV+P S+   L   +   S  E++ +  F+  + +  +  ++++V 
Sbjct: 3   IVKIKSLKVYAFGVYVHPYSLCEKLGPKYASISADELNNHHDFYKDLLREDINMTVRLVA 62

Query: 104 -VRDVDGKTFWDALDDAISPR-IKAPTLVDESALSAFRSVF-QDRALKKGTFIFLTWLDP 160
             R +   +  DA + ++  R +KA    D S L  F S F ++ ++  GT I       
Sbjct: 63  NCRGMKINSVKDAFEKSLRARLVKANPSTDFSCLKTFGSYFTENISIPLGTVIEFKRTVD 122

Query: 161 SKLLICVSSDGIPSSVDATIESANVASALFDVFFGDASVSPSLKASVTTGLATIL 215
            +L+  +S + I S     + S ++  A FD++ GD  V    K  +    A I+
Sbjct: 123 GRLITKISGNQIGS-----VHSKDLCRAFFDMYIGDVPVCEQTKKEIGMNAANII 172


>Glyma06g14820.2 
          Length = 186

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 9/140 (6%)

Query: 65  ILSALDTWKGQSTAEIHGNAAFFSSIFQAALEKSLQIVLVRDVDGKTFWDALDDAISPRI 124
           ++  LD +KG+S  E+  N  FF+++  A +EK +++V+++++ G  +   ++ A+  R+
Sbjct: 30  VVGHLDQFKGKSAKELEDNEEFFNALISAPVEKFIRLVVIKEIKGAQYGVQIETAVRDRL 89

Query: 125 KAPTLVDESALSAFRSV---FQDRALKKGTFIFLTWLDPSK---LLICVSSDGIPSSVDA 178
            A    +E    A   V   FQ +  KK + I  T+  P+      I VS +G   S   
Sbjct: 90  AAEDKYEEEEEEALEKVIEFFQSKYFKKLSVI--TYHFPANSATAEIVVSLEGKEDS-KY 146

Query: 179 TIESANVASALFDVFFGDAS 198
            IE+ANV  A+   + G +S
Sbjct: 147 VIENANVVEAIKKWYLGGSS 166