Jatropha Genome Database

JcCB0121431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0121431.10 + phase: 0 
         (188 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g52670.1                                                        88   5e-18
Glyma02g10240.1                                                        87   1e-17
Glyma18g52700.1                                                        77   1e-14
Glyma18g52680.1                                                        77   1e-14
Glyma02g10230.1                                                        72   3e-13
Glyma02g10240.2                                                        66   2e-11
Glyma04g35320.1                                                        61   5e-10
Glyma06g19450.1                                                        52   5e-07
Glyma18g44020.1                                                        49   4e-06

>Glyma18g52670.1 
          Length = 168

 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 24/174 (13%)

Query: 15  LILRVFAMLLLLTSVIILATDSATFKALLSSQEVTMRLKYIYSYRYMLSAAVIGIAYTFF 74
           L+LRV   + L+ ++I ++ +  TF  +    +  ++   +Y+YRYMLS  VIG AY   
Sbjct: 19  LLLRVLTFIFLVMALIFISINKLTFDEI----DAEIKFHDVYAYRYMLSTIVIGFAYNLL 74

Query: 75  QLPFAIYHISTGKRLIKNVAAIYFDFFSDKVILCFLASGVGAGFGATYDLKENLDQLDDI 134
           Q+ F+I+ + +GKR++ +     FDFF DK+I   L SG  AG G T +L +++      
Sbjct: 75  QMGFSIFTVVSGKRVLSSNGGYLFDFFGDKIIAYLLISGSAAGLGFTVELLQHIPS---- 130

Query: 135 FKKLGSNLLSEFRTQMDDFFTMGYVSATLLLLGFLCFGVSSLLSFLTLFKRAQN 188
                           D F     VSA+LLL+GFL   ++S+ +   L K+  N
Sbjct: 131 ----------------DSFTQKANVSASLLLVGFLFTAIASIFTSFALPKKDIN 168


>Glyma02g10240.1 
          Length = 170

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 22/176 (12%)

Query: 13  TTLILRVFAMLLLLTSVIILATDSATFKALLSSQEVTMRLKYIYSYRYMLSAAVIGIAYT 72
           T L+LRV   + L+ ++I ++ D+   +    +    +   Y+Y+YRYMLS  VIG AY 
Sbjct: 17  TVLLLRVLTFIFLVMALIFISIDTLPIETSDYAVYEEINFNYVYAYRYMLSTIVIGFAYN 76

Query: 73  FFQLPFAIYHISTGKRLIKNVAAIYFDFFSDKVILCFLASGVGAGFGATYDLKENLDQLD 132
             Q+ F+I+ + +GKR++ +     FDFF D++I   L SG  A FG  YD++       
Sbjct: 77  LLQMGFSIFTVVSGKRVLSSYGGYLFDFFGDQIISYLLISGSAAEFG--YDVQR------ 128

Query: 133 DIFKKLGSNLLSEFRTQMDDFFTMGYVSATLLLLGFLCFGVSSLLSFLTLFKRAQN 188
                         R   + F     VSA+LLL+GFL    +S+ +   L K+A N
Sbjct: 129 --------------RRVTNSFTEKANVSASLLLVGFLFTATASIFTSFALPKKAIN 170


>Glyma18g52700.1 
          Length = 165

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 22/146 (15%)

Query: 44  SSQEVTMRLKY--IYSYRYMLSAAVIGIAYTFFQLPFAIYHISTGKRLIKNVAAIYFDFF 101
           +  E    +K+  IY+YRYM+S  +IG AY   Q+ F+++ + +G R++       FDFF
Sbjct: 40  TDDETGAEIKFNDIYAYRYMISTIIIGFAYNLLQMAFSMFTVVSGNRVLSGDGGYLFDFF 99

Query: 102 SDKVILCFLASGVGAGFGATYDLKENLDQLDDIFKKLGSNLLSEFRTQMDDFFTMGYVSA 161
            DK+I   L SG  AGFG T +L   +                      + F      SA
Sbjct: 100 GDKIISYLLISGSAAGFGVTVELGRGVPS--------------------NSFIEKANASA 139

Query: 162 TLLLLGFLCFGVSSLLSFLTLFKRAQ 187
           +LLL+GFL   ++S  +   L K+A 
Sbjct: 140 SLLLIGFLLTAIASTFTSFALPKKAN 165


>Glyma18g52680.1 
          Length = 165

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 22/146 (15%)

Query: 44  SSQEVTMRLKY--IYSYRYMLSAAVIGIAYTFFQLPFAIYHISTGKRLIKNVAAIYFDFF 101
           +  E    +K+  IY+YRYM+S  +IG AY   Q+ F+++ + +G R++       FDFF
Sbjct: 40  TDDETGAEIKFNDIYAYRYMISTIIIGFAYNLLQMAFSMFTVVSGNRVLSGDGGYLFDFF 99

Query: 102 SDKVILCFLASGVGAGFGATYDLKENLDQLDDIFKKLGSNLLSEFRTQMDDFFTMGYVSA 161
            DK+I   L SG  AGFG T +L   +                      + F      SA
Sbjct: 100 GDKIISYLLISGSAAGFGVTVELGRGVPS--------------------NSFIEKANASA 139

Query: 162 TLLLLGFLCFGVSSLLSFLTLFKRAQ 187
           +LLL+GFL   ++S  +   L K+A 
Sbjct: 140 SLLLIGFLLTAIASTFTSFALPKKAN 165


>Glyma02g10230.1 
          Length = 169

 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 20/138 (14%)

Query: 48  VTMRLKYIYSYRYMLSAAVIGIAYTFFQLPFAIYHISTGKRLIKNVAAIYFDFFSDKVIL 107
           V ++   IY+YRYM+S  +IG AY   Q+  +I+ + +G R++       FDFF DK+I 
Sbjct: 51  VEIKFNDIYAYRYMISTIIIGFAYNLLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIIS 110

Query: 108 CFLASGVGAGFGATYDLKENLDQLDDIFKKLGSNLLSEFRTQMDDFFTMGYVSATLLLLG 167
             L SG  AGFG T +L   +                      + F      SA+LLL+ 
Sbjct: 111 YLLISGSAAGFGVTVELGRGVPS--------------------NSFMDKANASASLLLIA 150

Query: 168 FLCFGVSSLLSFLTLFKR 185
           FL   V+S  +   L K+
Sbjct: 151 FLFTAVASTFTSFALPKK 168


>Glyma02g10240.2 
          Length = 136

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 56/94 (59%)

Query: 13  TTLILRVFAMLLLLTSVIILATDSATFKALLSSQEVTMRLKYIYSYRYMLSAAVIGIAYT 72
           T L+LRV   + L+ ++I ++ D+   +    +    +   Y+Y+YRYMLS  VIG AY 
Sbjct: 17  TVLLLRVLTFIFLVMALIFISIDTLPIETSDYAVYEEINFNYVYAYRYMLSTIVIGFAYN 76

Query: 73  FFQLPFAIYHISTGKRLIKNVAAIYFDFFSDKVI 106
             Q+ F+I+ + +GKR++ +     FDFF D+++
Sbjct: 77  LLQMGFSIFTVVSGKRVLSSYGGYLFDFFGDQLL 110


>Glyma04g35320.1 
          Length = 268

 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 83/185 (44%), Gaps = 31/185 (16%)

Query: 2   SEPEISKALPITTLILRVFAMLLLLTSVIILATDSATFKALLSSQEVTMRLKYIYSYRYM 61
           +E  +SKA     L  R+  +++ L S  ++A D    K    S +   R K    YRY 
Sbjct: 113 TEETVSKA----ALGFRLSEVVVCLISFSVMAAD----KTQGWSGDSFDRYK---EYRYC 161

Query: 62  LSAAVIGIAYTFFQLPFAIYHISTGKRLIKNVAAIYFDFFSDKVILCFLASGVGAGFGAT 121
           LS  VIG AY+  Q       I+TGKRLI +    +FDFF D+V+   L S   +   AT
Sbjct: 162 LSVNVIGFAYSALQACDLTCQIATGKRLISHHLRNHFDFFMDQVLAYLLISASSS--AAT 219

Query: 122 YDLKENLDQLDDIFKKLGSNLLSEFRTQMDDFFTMGYVSATLLLLGFLCFGVSSLLSFLT 181
                   ++DD     G           D+F  M   S  +  L F+ F +SSL+S  T
Sbjct: 220 --------RVDDWISNWGK----------DEFTEMATASIGMAFLAFVAFAISSLISGYT 261

Query: 182 LFKRA 186
           L  R+
Sbjct: 262 LCNRS 266


>Glyma06g19450.1 
          Length = 263

 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 20/129 (15%)

Query: 58  YRYMLSAAVIGIAYTFFQLPFAIYHISTGKRLIKNVAAIYFDFFSDKVILCFLASGVGAG 117
           YRY LS  +IG AY+  Q       ++TGKRLI +    +FDFF D+V+   L       
Sbjct: 153 YRYCLSVNIIGFAYSALQACDLTCQLATGKRLISHHLRNHFDFFMDQVLAYLL------- 205

Query: 118 FGATYDLKENLDQLDDIFKKLGSNLLSEFRTQMDDFFTMGYVSATLLLLGFLCFGVSSLL 177
                       +++D     G           D+F  M   S  +  L F+ F +SSL+
Sbjct: 206 ---ISSSSSAATRVEDWILNWGK----------DEFTEMATASIGMAFLAFVAFAISSLI 252

Query: 178 SFLTLFKRA 186
           S  TL  R+
Sbjct: 253 SGYTLCNRS 261


>Glyma18g44020.1 
          Length = 197

 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 34/167 (20%)

Query: 14  TLILRVFAMLLLLTSVIILATDS-ATFKALLSSQEVTMRLKYIYSYRYMLSAAVIGIAYT 72
           +L LR  A+L  L S II+A++    ++     +E          YRY+L+ A++   YT
Sbjct: 53  SLGLRGIALLFCLISFIIMASNKHGDWREFDKYEE----------YRYLLAIAILSSLYT 102

Query: 73  FFQLPFAIYHISTGKRLIKNVAAIYFDFFSDKVILCFLASGVGAGFGATYDLKENLDQLD 132
             Q    I  +ST K+L++   A   DFF D++I   L S   +    T  ++E      
Sbjct: 103 GAQAFRQIQELSTAKQLLQPRMAAMIDFFGDQIIAYLLISSASSAIPMTNRMREG----- 157

Query: 133 DIFKKLGSNLLSEFRTQMDDFFTMGYVSA-TLLLLGFLCFGVSSLLS 178
                             D+ FT    +A ++ +  FLC  VS+L+S
Sbjct: 158 -----------------ADNIFTDSSAAAISMSIFAFLCLAVSALIS 187