Jatropha Genome Database

JcCB0120561.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0120561.20 + phase: 0 /partial
         (150 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g05050.3                                                       156   1e-38
Glyma12g05050.1                                                       155   1e-38
Glyma12g05050.2                                                       155   1e-38
Glyma11g12920.1                                                       150   5e-37
Glyma11g12920.2                                                       150   6e-37

>Glyma12g05050.3 
          Length = 532

 Score =  156 bits (394), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 74/124 (59%), Positives = 95/124 (76%), Gaps = 3/124 (2%)

Query: 24  ENEESDFRWAPPKGPSTKIITKASLLAAQREDLRRVMELLSLREHHARTLLIHYRWDVER 83
           EN+E ++     KGP+TK+ITK SLLAAQ+EDLRRVM++LS+RE HARTLLI +RWDVE 
Sbjct: 25  ENDE-NYALLSSKGPTTKVITKESLLAAQKEDLRRVMDMLSVREQHARTLLIFHRWDVEN 83

Query: 84  LLAVFVEKGKSYLFTEAGVTVVEQLDIDSPLTSSSTITCDICIEDISGDKATRMDCGHCY 143
           L  V+V+KGKS+LF EAGV+V E  D DSP+       C+IC++++   K TRMDCGHC+
Sbjct: 84  LFEVYVDKGKSFLFAEAGVSVDEHRDSDSPVPPD--FMCNICMDEVPSSKTTRMDCGHCF 141

Query: 144 CNDC 147
           CN C
Sbjct: 142 CNGC 145


>Glyma12g05050.1 
          Length = 580

 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 74/124 (59%), Positives = 95/124 (76%), Gaps = 3/124 (2%)

Query: 24  ENEESDFRWAPPKGPSTKIITKASLLAAQREDLRRVMELLSLREHHARTLLIHYRWDVER 83
           EN+E ++     KGP+TK+ITK SLLAAQ+EDLRRVM++LS+RE HARTLLI +RWDVE 
Sbjct: 25  ENDE-NYALLSSKGPTTKVITKESLLAAQKEDLRRVMDMLSVREQHARTLLIFHRWDVEN 83

Query: 84  LLAVFVEKGKSYLFTEAGVTVVEQLDIDSPLTSSSTITCDICIEDISGDKATRMDCGHCY 143
           L  V+V+KGKS+LF EAGV+V E  D DSP+       C+IC++++   K TRMDCGHC+
Sbjct: 84  LFEVYVDKGKSFLFAEAGVSVDEHRDSDSPVPPD--FMCNICMDEVPSSKTTRMDCGHCF 141

Query: 144 CNDC 147
           CN C
Sbjct: 142 CNGC 145


>Glyma12g05050.2 
          Length = 541

 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 74/124 (59%), Positives = 95/124 (76%), Gaps = 3/124 (2%)

Query: 24  ENEESDFRWAPPKGPSTKIITKASLLAAQREDLRRVMELLSLREHHARTLLIHYRWDVER 83
           EN+E ++     KGP+TK+ITK SLLAAQ+EDLRRVM++LS+RE HARTLLI +RWDVE 
Sbjct: 25  ENDE-NYALLSSKGPTTKVITKESLLAAQKEDLRRVMDMLSVREQHARTLLIFHRWDVEN 83

Query: 84  LLAVFVEKGKSYLFTEAGVTVVEQLDIDSPLTSSSTITCDICIEDISGDKATRMDCGHCY 143
           L  V+V+KGKS+LF EAGV+V E  D DSP+       C+IC++++   K TRMDCGHC+
Sbjct: 84  LFEVYVDKGKSFLFAEAGVSVDEHRDSDSPVPPD--FMCNICMDEVPSSKTTRMDCGHCF 141

Query: 144 CNDC 147
           CN C
Sbjct: 142 CNGC 145


>Glyma11g12920.1 
          Length = 580

 Score =  150 bits (379), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 93/124 (75%), Gaps = 3/124 (2%)

Query: 24  ENEESDFRWAPPKGPSTKIITKASLLAAQREDLRRVMELLSLREHHARTLLIHYRWDVER 83
           EN+E ++     KG +TK+ITK SLLAAQ+EDLRRVM++LS+RE HARTLLI +RWDVE 
Sbjct: 25  ENDE-NYALLSSKGTTTKVITKESLLAAQKEDLRRVMDMLSVREQHARTLLIFHRWDVEN 83

Query: 84  LLAVFVEKGKSYLFTEAGVTVVEQLDIDSPLTSSSTITCDICIEDISGDKATRMDCGHCY 143
           L  V V+KGKS+LF EAGV+V E  + DSP+  +    C IC+E++   K TRMDCGHC+
Sbjct: 84  LFEVLVDKGKSFLFAEAGVSVDEHRNSDSPVPPA--FMCYICMEEVPSSKTTRMDCGHCF 141

Query: 144 CNDC 147
           CN C
Sbjct: 142 CNGC 145


>Glyma11g12920.2 
          Length = 532

 Score =  150 bits (378), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 93/124 (75%), Gaps = 3/124 (2%)

Query: 24  ENEESDFRWAPPKGPSTKIITKASLLAAQREDLRRVMELLSLREHHARTLLIHYRWDVER 83
           EN+E ++     KG +TK+ITK SLLAAQ+EDLRRVM++LS+RE HARTLLI +RWDVE 
Sbjct: 25  ENDE-NYALLSSKGTTTKVITKESLLAAQKEDLRRVMDMLSVREQHARTLLIFHRWDVEN 83

Query: 84  LLAVFVEKGKSYLFTEAGVTVVEQLDIDSPLTSSSTITCDICIEDISGDKATRMDCGHCY 143
           L  V V+KGKS+LF EAGV+V E  + DSP+  +    C IC+E++   K TRMDCGHC+
Sbjct: 84  LFEVLVDKGKSFLFAEAGVSVDEHRNSDSPVPPA--FMCYICMEEVPSSKTTRMDCGHCF 141

Query: 144 CNDC 147
           CN C
Sbjct: 142 CNGC 145