Jatropha Genome Database

JcCB0117851.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0117851.20 + phase: 0 /partial
         (59 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g36440.1                                                        91   2e-19
Glyma17g08230.1                                                        91   3e-19
Glyma06g21190.1                                                        85   2e-17
Glyma17g11100.1                                                        84   3e-17
Glyma05g00820.1                                                        84   3e-17
Glyma04g14770.1                                                        80   5e-16
Glyma09g34830.1                                                        80   6e-16
Glyma04g32990.1                                                        79   8e-16
Glyma17g33930.1                                                        79   1e-15

>Glyma02g36440.1 
          Length = 1138

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 42/47 (89%), Positives = 45/47 (95%)

Query: 1   SSVLALEDSALDVDQVDNLIKFCPTKEEMELLKGYTGEKEKLGKCEQ 47
           SSVLALE+SALD DQV+NLIKFCPTKEEMELLKGY GEKEKLG+CEQ
Sbjct: 827 SSVLALEESALDTDQVENLIKFCPTKEEMELLKGYNGEKEKLGRCEQ 873


>Glyma17g08230.1 
          Length = 1132

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/47 (89%), Positives = 45/47 (95%)

Query: 1   SSVLALEDSALDVDQVDNLIKFCPTKEEMELLKGYTGEKEKLGKCEQ 47
           SSVLALE+SALD DQV+NLIKFCPTKEEMELLKGY GEKEKLG+CEQ
Sbjct: 801 SSVLALEESALDTDQVENLIKFCPTKEEMELLKGYNGEKEKLGRCEQ 847


>Glyma06g21190.1 
          Length = 1075

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 37/47 (78%), Positives = 45/47 (95%)

Query: 1   SSVLALEDSALDVDQVDNLIKFCPTKEEMELLKGYTGEKEKLGKCEQ 47
           ++VLA++DS LDVDQV+NLIKFCPTKEE+ELLKGYTG+KE LGKCE+
Sbjct: 863 AAVLAMDDSVLDVDQVENLIKFCPTKEEIELLKGYTGDKENLGKCEK 909


>Glyma17g11100.1 
          Length = 1312

 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 38/47 (80%), Positives = 45/47 (95%)

Query: 1    SSVLALEDSALDVDQVDNLIKFCPTKEEMELLKGYTGEKEKLGKCEQ 47
            ++VLAL++S LDVDQV+NLIKFCPTKEEM+LLKGYTG+KE LGKCEQ
Sbjct: 1003 AAVLALDESVLDVDQVENLIKFCPTKEEMDLLKGYTGDKEILGKCEQ 1049


>Glyma05g00820.1 
          Length = 1005

 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 38/47 (80%), Positives = 45/47 (95%)

Query: 1   SSVLALEDSALDVDQVDNLIKFCPTKEEMELLKGYTGEKEKLGKCEQ 47
           ++VLAL++S LDVDQV+NLIKFCPTKEEM+LLKGYTG+KE LGKCEQ
Sbjct: 696 AAVLALDESVLDVDQVENLIKFCPTKEEMDLLKGYTGDKELLGKCEQ 742


>Glyma04g14770.1 
          Length = 1179

 Score = 80.1 bits (196), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 35/46 (76%), Positives = 41/46 (89%)

Query: 2   SVLALEDSALDVDQVDNLIKFCPTKEEMELLKGYTGEKEKLGKCEQ 47
           +VLAL+ + LD+DQV+NLIKFCPTKEEME+LK YTG KE LGKCEQ
Sbjct: 872 AVLALDSAVLDIDQVENLIKFCPTKEEMEMLKNYTGNKEMLGKCEQ 917


>Glyma09g34830.1 
          Length = 1211

 Score = 79.7 bits (195), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 35/46 (76%), Positives = 41/46 (89%)

Query: 2   SVLALEDSALDVDQVDNLIKFCPTKEEMELLKGYTGEKEKLGKCEQ 47
           +VLAL+ + LD+DQV+NLIKFCPTKEEME+LK YTG KE LGKCEQ
Sbjct: 887 AVLALDSAILDIDQVENLIKFCPTKEEMEMLKNYTGNKEMLGKCEQ 932


>Glyma04g32990.1 
          Length = 1148

 Score = 79.3 bits (194), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 34/47 (72%), Positives = 44/47 (93%)

Query: 1   SSVLALEDSALDVDQVDNLIKFCPTKEEMELLKGYTGEKEKLGKCEQ 47
           ++VLA++DS LDVDQ++NL KFCPTKEE+ELLKGYTG+KE LG+CE+
Sbjct: 835 AAVLAMDDSVLDVDQLENLSKFCPTKEEIELLKGYTGDKENLGRCEK 881


>Glyma17g33930.1 
          Length = 1322

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 35/46 (76%), Positives = 41/46 (89%)

Query: 2    SVLALEDSALDVDQVDNLIKFCPTKEEMELLKGYTGEKEKLGKCEQ 47
            +VLAL+DS LDVDQV+NLIKF PTKEEME+LK Y G+K+ LGKCEQ
Sbjct: 1004 AVLALDDSVLDVDQVENLIKFSPTKEEMEMLKNYNGDKDNLGKCEQ 1049