Jatropha Genome Database

JcCB0117851.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0117851.10 - phase: 1 /partial
         (279 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g07380.1                                                       313   1e-85
Glyma16g03770.1                                                       301   4e-82
Glyma10g37610.1                                                       294   8e-80
Glyma18g47060.1                                                       272   3e-73
Glyma10g37600.1                                                       250   9e-67
Glyma15g13090.1                                                        71   1e-12
Glyma09g02170.1                                                        64   2e-10

>Glyma07g07380.1 
          Length = 694

 Score =  313 bits (802), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 160/283 (56%), Positives = 197/283 (69%), Gaps = 5/283 (1%)

Query: 1   RHDSLVMVSGGSGITPLISIIREVLFASTTDKCKTPQITLICSFKNSXXXXXXXXXXPIS 60
           RHD+LVMVSGGSGITP ISIIRE+++ +TT KCKTP++ LIC+FKNS          PIS
Sbjct: 413 RHDTLVMVSGGSGITPFISIIRELIYLNTTFKCKTPKVVLICAFKNSSSLSMLDMILPIS 472

Query: 61  GTPSAFSNLQLKIEAYVTREKEPTINNWNLIRTIRSKPNSLIGEPVSAVLGGKSWLWXXX 120
           GTPS  SN++L+IEAY+TR+KE   +     +TI  KPN     PV A+LG  SWLW   
Sbjct: 473 GTPSDISNMELQIEAYITRDKELKADCPIHPQTIWFKPNP-SDTPVHAILGPNSWLWLGA 531

Query: 121 XXXXXXXXXXXXXXXXTRYYIYPIDHNTNEVFSYSFRSSLNMLVICIGIAMTASAAVLWN 180
                           TRYYI+PIDHN+N++FS+   + LNMLVIC+ IA  ASA  LWN
Sbjct: 532 IISSSFIIFLILIGIITRYYIFPIDHNSNKIFSFPLNAFLNMLVICVSIASAASAVFLWN 591

Query: 181 KRLNAREGNRIQSNLGPTPTFSPH----NGERELESLPHESLLQAIDVHYGERPDLKRIL 236
           K+ NA+E  ++Q+  G TPT SP+    N +RELESLP++SL+ A +VHYG RPDL+R+L
Sbjct: 592 KKHNAKEAKQVQNMEGSTPTASPNSMVCNADRELESLPYQSLIHATNVHYGVRPDLRRML 651

Query: 237 FECKSSSVGVLVCGPKKMRHEVATICSSRSADNLHFESISFSW 279
            E K SSVGVL  GPKKM+ EVA ICSS  ADNLHFESISFSW
Sbjct: 652 LEHKESSVGVLASGPKKMQQEVAAICSSGLADNLHFESISFSW 694


>Glyma16g03770.1 
          Length = 718

 Score =  301 bits (772), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 159/283 (56%), Positives = 195/283 (68%), Gaps = 5/283 (1%)

Query: 1   RHDSLVMVSGGSGITPLISIIREVLFASTTDKCKTPQITLICSFKNSXXXXXXXXXXPIS 60
           RHD+LVMVSGGSGITP ISIIRE+++ +TT KCKTP++ LIC+F+NS          PIS
Sbjct: 437 RHDTLVMVSGGSGITPFISIIRELIYLNTTFKCKTPKVVLICAFRNSTSLSMLDMILPIS 496

Query: 61  GTPSAFSNLQLKIEAYVTREKEPTINNWNLIRTIRSKPNSLIGEPVSAVLGGKSWLWXXX 120
           GTPS  SN++L+IEAY+TR++E   +     +TI  KPN     PV A+LG  SWLW   
Sbjct: 497 GTPSEISNMELQIEAYITRDEELKADCPIHPQTIWFKPNP-SDAPVHAILGPNSWLWLGA 555

Query: 121 XXXXXXXXXXXXXXXXTRYYIYPIDHNTNEVFSYSFRSSLNMLVICIGIAMTASAAVLWN 180
                           TRYYI+PIDHN+NE+FS+   + LNMLVIC+ IA  ASAA LWN
Sbjct: 556 IISSSFIIFLILIGIITRYYIFPIDHNSNEIFSFPLNAFLNMLVICVSIASAASAAFLWN 615

Query: 181 KRLNAREGNRIQSNLGPTPTFSP----HNGERELESLPHESLLQAIDVHYGERPDLKRIL 236
           K+ NA+E  + Q+  G TPT SP    HN +RELESLP++SL+ A +VHYG RPDL+R+L
Sbjct: 616 KKHNAKEAKQAQNLEGSTPTVSPNSMVHNADRELESLPYQSLIHATNVHYGVRPDLRRML 675

Query: 237 FECKSSSVGVLVCGPKKMRHEVATICSSRSADNLHFESISFSW 279
            E K SSVGVL  GPK MR EVA ICSS  A N+HFESISFSW
Sbjct: 676 LEHKGSSVGVLASGPKIMRQEVAAICSSGLAANMHFESISFSW 718


>Glyma10g37610.1 
          Length = 591

 Score =  294 bits (752), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 151/284 (53%), Positives = 193/284 (67%), Gaps = 6/284 (2%)

Query: 1   RHDSLVMVSGGSGITPLISIIREVLFASTTDKCKTPQITLICSFKNSXXXXXXXXXXPIS 60
           RH+ LV+VSGGSGITP ISIIR ++F + T+  KTP++ L+C+FK S          P+S
Sbjct: 309 RHELLVLVSGGSGITPFISIIRSLIFKANTEGSKTPRVLLVCAFKKSIDLTTIDLILPVS 368

Query: 61  GTPSAF--SNLQLKIEAYVTREKEPTINNWNLIRTIRSKPNSLIGEPVSAVLGGKSWLWX 118
            T +AF  S LQL+IEAYVTREK+P +N+  LI+T+  KPN+L  EPVSAVLG  SWL+ 
Sbjct: 369 ATCTAFDISRLQLQIEAYVTREKQPDMNDKKLIQTLWFKPNAL-DEPVSAVLGQNSWLYL 427

Query: 119 XXXXXXXXXXXXXXXXXXTRYYIYPIDHNTNEVFSYSFRSSLNMLVICIGIAMTASAAVL 178
                             TRYYIYPIDHNT+ ++ Y  RSSL+ML ICI IA  A++A L
Sbjct: 428 SIIISSSFMLFLLLIAILTRYYIYPIDHNTDMIYPYFSRSSLSMLFICISIAFVATSAFL 487

Query: 179 WNKRLNAREG---NRIQSNLGPTPTFSPHNGERELESLPHESLLQAIDVHYGERPDLKRI 235
           WNK+ N   G   N   SN   +P    +N +REL SLP +SL+Q   VHYGERP++K+I
Sbjct: 488 WNKKQNKDLGQIKNIYTSNSSTSPGSGYYNADRELGSLPLQSLVQTAKVHYGERPNIKKI 547

Query: 236 LFECKSSSVGVLVCGPKKMRHEVATICSSRSADNLHFESISFSW 279
           L  C  SS+GVLV GP+KMRHEVA++C+S S D+LHFES+SFSW
Sbjct: 548 LSGCNGSSIGVLVSGPRKMRHEVASLCTSCSTDDLHFESLSFSW 591


>Glyma18g47060.1 
          Length = 690

 Score =  272 bits (695), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 142/283 (50%), Positives = 188/283 (66%), Gaps = 5/283 (1%)

Query: 1   RHDSLVMVSGGSGITPLISIIREVLFASTTDKCKTPQITLICSFKNSXXXXXXXXXXPIS 60
           R+D++VMVSGGSGITP ISIIRE+L+ +TT + +TP++ LIC+FKNS          P S
Sbjct: 409 RYDTIVMVSGGSGITPFISIIRELLYLNTTFRYRTPKVILICAFKNSYYLSMLDLILPNS 468

Query: 61  GTPSAFSNLQLKIEAYVTREKEPTINNWNLIRTIRSKPNSLIGEPVSAVLGGKSWLWXXX 120
           GTP   SN+QL+I+AY+TR++E  + N   ++ I  KP +    P+SA+LG  +WLW   
Sbjct: 469 GTPYDMSNMQLQIKAYITRKEEHRLENQIHLQQIWFKPKA-TDAPISAILGPNNWLWLCA 527

Query: 121 XXXXXXXXXXXXXXXXTRYYIYPIDHNTNEVFSYSFRSSLNMLVICIGIAMTASAAVLWN 180
                           TR+ I+PIDHN+N++FS   RS LN+  IC+ I+M ASAAVLWN
Sbjct: 528 IISSSFIIFLILIGIITRFIIFPIDHNSNKIFSQPLRSFLNIFAICVSISMAASAAVLWN 587

Query: 181 KRLNAREGNRIQ----SNLGPTPTFSPHNGERELESLPHESLLQAIDVHYGERPDLKRIL 236
           K+ N RE  +IQ    S+   +P  +   G++ELESLP +SL+QA  VHYG RPDL+R+L
Sbjct: 588 KKYNDREAKQIQNLEGSSSAESPKLNTDEGDKELESLPQQSLVQATKVHYGARPDLRRLL 647

Query: 237 FECKSSSVGVLVCGPKKMRHEVATICSSRSADNLHFESISFSW 279
            E + S VGV V GPKKMR EVA ICSS   +NLHFES SF+W
Sbjct: 648 LELEGSRVGVFVSGPKKMRQEVAAICSSDLGENLHFESFSFNW 690


>Glyma10g37600.1 
          Length = 702

 Score =  250 bits (639), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 136/286 (47%), Positives = 183/286 (63%), Gaps = 8/286 (2%)

Query: 1   RHDSLVMVSGGSGITPLISIIREVLFASTTDK-CKTPQITLICSFKNSXXXXXXXXXXPI 59
           R+  LV+VSGGSGITP ISIIR+++F +  ++    P++ L+C+FKNS          P+
Sbjct: 418 RYKQLVLVSGGSGITPFISIIRDLIFQNRQEQESHVPKVLLVCAFKNSADLTMLDLLLPL 477

Query: 60  SGTPSAFSNL-QLKIEAYVTREKEPT-INNWNLIRTIRSKPNSLIGEPVSAVLGGKSWLW 117
             + + FSNL QL+IEAY+TREKE    ++   I+T   KP  L   P+S VLG  +WLW
Sbjct: 478 FVSTTQFSNLHQLQIEAYITREKEEAPRDSQKQIQTKWFKP-ILSDSPISLVLGPNNWLW 536

Query: 118 XXXXXXXXXXXXXXXXXXXTRYYIYPIDHNTNEVFSYSFRSSLNMLVICIGIAMTASAAV 177
                              TRYYIYPI++N++EV+ ++F+    M ++C  I + +SA  
Sbjct: 537 LGAIISSSFLMFLLLLGIITRYYIYPIENNSDEVYHWTFKVLWFMFLLCAVICICSSAVF 596

Query: 178 LWNKRLNAREGNRIQSNLGPTPTFSP----HNGERELESLPHESLLQAIDVHYGERPDLK 233
           LW KR N+ E  +I +   PTPT SP    +  ERELESLPH+SL+QA +VH+G RPDLK
Sbjct: 597 LWWKRQNSLESKQIMNVEFPTPTRSPGSWIYGSERELESLPHQSLVQATNVHFGARPDLK 656

Query: 234 RILFECKSSSVGVLVCGPKKMRHEVATICSSRSADNLHFESISFSW 279
           +ILFECK   +GVLV GP+ MRHEV  IC+S  ADNLHFES SF+W
Sbjct: 657 KILFECKDKDIGVLVSGPRSMRHEVGKICASGLADNLHFESFSFTW 702


>Glyma15g13090.1 
          Length = 732

 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 123/295 (41%), Gaps = 30/295 (10%)

Query: 2   HDSLVMVSGGSGITPLISIIREVLFASTTDK-CKTPQITLICSFKNSXXXXXXXXXXPIS 60
           +++L++V+GG G++P ++I+ ++L      K C++  I L+ + K S            S
Sbjct: 449 YENLILVAGGIGLSPFLAILSDILHRVREGKPCQSRNILLVWAVKKSNELPLLSTIDMQS 508

Query: 61  GTPSAFSNLQLKIEAYVTREKEPTINNWNLIRTIRSKPNSLIGE-PVSAVLGGKSWLWXX 119
             PS    + + I  YVTRE +P +      + I+S    +  +  +S ++G    +W  
Sbjct: 509 ICPSFSDKVNIDIHIYVTRESDPPVEEGYSYKPIKSSFCPMASDCGMSVLVGTGDNVWSG 568

Query: 120 XXXXXXXXXXXXXXXXXTRYYIYPIDHNTNEVFSYSFRSSLNMLVICIGIAMTASAAV-- 177
                              YYI P    T     + ++  L ++ +   + +   + V  
Sbjct: 569 LYVISSTVGFVILLALLYVYYIAPFHIET-----WWYKGLLYVICMVASVVIFGGSVVAM 623

Query: 178 --LWNKRLNAREGNRIQSNLGPTPTFSPH-NGERELESLPHESLLQAIDVHYGERPDLKR 234
             +W K+      N ++ N   T     H NG    ++    S+ ++  + YG RPD K 
Sbjct: 624 WHIWEKQ------NSLKDNSNDTKVDKIHQNGSLTPKAPSQVSIAKSTVIRYGSRPDFKE 677

Query: 235 ILFECKSS-----SVGVLVCGPKKMRHEVA------TICSSRSADNLHFESISFS 278
           I +E  S       VG++VCGP  ++  VA      ++   R     HF S SF 
Sbjct: 678 I-YESMSEKWGLVDVGIIVCGPSTLQTSVAEEIRSHSMTRQRHHPIFHFHSHSFD 731


>Glyma09g02170.1 
          Length = 734

 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 113/277 (40%), Gaps = 23/277 (8%)

Query: 2   HDSLVMVSGGSGITPLISIIREVLFASTTDK-CKTPQITLICSFKNSXXXXXXXXXXPIS 60
           +++L++V+GG G++P ++I+ ++L      K C+   I L+ + K S            S
Sbjct: 450 YENLILVAGGIGLSPFLAILSDILHRVREGKPCQPRNILLVWAVKKSNELPLLSTIDMES 509

Query: 61  GTPSAFSNLQLKIEAYVTREKEPTINNWNLIRTIRSKPNSLIGE-PVSAVLGGKSWLWXX 119
             PS  + + + I  YVTRE +P +      + I+S    +  +  +S ++G     W  
Sbjct: 510 ICPSFSNKVNIDIHIYVTRESDPPLEEGYSYKPIKSSFCPMASDCGMSVLVGTGDNFWSG 569

Query: 120 XXXXXXXXXXXXXXXXXTRYYIYPIDHNTNEVFSYSFRSSLNMLVICIGIAMTASAAV-- 177
                              YY+ P    T     + +R  L ++ +   + +   + V  
Sbjct: 570 LYVISSTVGFVILLALLYVYYVTPFHIET-----WWYRGLLYVICMVASVVIFGGSVVAM 624

Query: 178 --LWNKRLNAREGNRIQSNLGPTPTFSPH-NGERELESLPHES-LLQAIDVHYGERPDLK 233
             +W K+      N ++     T     H NG    +    +S + ++  +HYG RP+ K
Sbjct: 625 WHIWEKQ------NSLKDKSNDTKVDKIHQNGSLATKDQSQDSSIAKSTVIHYGSRPNFK 678

Query: 234 RILFECKSS----SVGVLVCGPKKMRHEVATICSSRS 266
            I            VGV+VCGP  ++  VA    S S
Sbjct: 679 EIYDSISEKWGLVDVGVIVCGPSTLQTSVAEEIRSHS 715