Jatropha Genome Database
- JcCB0115521.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0115521.20 + phase: 0 /partial/short
(38 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g00790.2 70 4e-13
Glyma12g00790.1 70 4e-13
Glyma09g36570.2 70 5e-13
Glyma09g36570.1 70 5e-13
Glyma17g14780.1 64 4e-11
Glyma06g47630.2 62 2e-10
Glyma04g13880.2 62 2e-10
Glyma04g13880.1 62 2e-10
Glyma06g47630.1 60 4e-10
Glyma04g41640.1 51 3e-07
Glyma06g13170.1 51 3e-07
Glyma13g01910.1 49 2e-06
Glyma18g02160.1 47 4e-06
Glyma11g38230.1 47 4e-06
Glyma05g31350.1 47 4e-06
>Glyma12g00790.2
Length = 389
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 35/38 (92%)
Query: 1 VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFLNS 38
VLREGNKGYGILVSS PKE+NA YSLRDP+EVM+FL S
Sbjct: 339 VLREGNKGYGILVSSAPKESNAIYSLRDPSEVMEFLKS 376
>Glyma12g00790.1
Length = 389
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 35/38 (92%)
Query: 1 VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFLNS 38
VLREGNKGYGILVSS PKE+NA YSLRDP+EVM+FL S
Sbjct: 339 VLREGNKGYGILVSSAPKESNAIYSLRDPSEVMEFLKS 376
>Glyma09g36570.2
Length = 389
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 35/38 (92%)
Query: 1 VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFLNS 38
VLREGNKGYGILVSS PKE+NA YSLRDP+EVM+FL S
Sbjct: 339 VLREGNKGYGILVSSAPKESNAIYSLRDPSEVMEFLKS 376
>Glyma09g36570.1
Length = 389
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 35/38 (92%)
Query: 1 VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFLNS 38
VLREGNKGYGILVSS PKE+NA YSLRDP+EVM+FL S
Sbjct: 339 VLREGNKGYGILVSSAPKESNAIYSLRDPSEVMEFLKS 376
>Glyma17g14780.1
Length = 386
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 32/37 (86%)
Query: 1 VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFLN 37
+LRE N+GYGILVSS KE+NAFYSLRDP EVMKFL
Sbjct: 340 MLRESNRGYGILVSSVRKESNAFYSLRDPNEVMKFLQ 376
>Glyma06g47630.2
Length = 305
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/38 (76%), Positives = 31/38 (81%)
Query: 1 VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFLNS 38
VLRE NKG GILVS PKE+NA YSLRDP EVM+FL S
Sbjct: 257 VLREVNKGCGILVSPAPKESNAIYSLRDPCEVMEFLTS 294
>Glyma04g13880.2
Length = 382
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 1 VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFLNS 38
VL+E NKG GILVS PKE+NA YSLRDP+EVM+FL S
Sbjct: 334 VLKEANKGCGILVSRAPKESNAIYSLRDPSEVMEFLTS 371
>Glyma04g13880.1
Length = 382
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 1 VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFLNS 38
VL+E NKG GILVS PKE+NA YSLRDP+EVM+FL S
Sbjct: 334 VLKEANKGCGILVSRAPKESNAIYSLRDPSEVMEFLTS 371
>Glyma06g47630.1
Length = 383
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/38 (76%), Positives = 31/38 (81%)
Query: 1 VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFLNS 38
VLRE NKG GILVS PKE+NA YSLRDP EVM+FL S
Sbjct: 335 VLREVNKGCGILVSPAPKESNAIYSLRDPCEVMEFLTS 372
>Glyma04g41640.1
Length = 367
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 1 VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFLN 37
V++ +GY I+VSS P+ETNA YSLRDP+EV+ FL+
Sbjct: 321 VIQSREQGYPIIVSSIPRETNALYSLRDPSEVLIFLS 357
>Glyma06g13170.1
Length = 272
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 1 VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFLN 37
V++ +GY I+VSS P+ETNA YSLRDP+EV+ FL+
Sbjct: 226 VIQSREQGYPIIVSSIPRETNALYSLRDPSEVLIFLS 262
>Glyma13g01910.1
Length = 358
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 27/36 (75%)
Query: 1 VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFL 36
VLR G GILVS PKET+A Y+L+DPTEV +FL
Sbjct: 307 VLRRRGHGVGILVSKIPKETDASYTLQDPTEVGQFL 342
>Glyma18g02160.1
Length = 365
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 28/35 (80%)
Query: 2 LREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFL 36
LR+ +G+GILVS PK+T+A YSL++P EVM FL
Sbjct: 314 LRDRGQGFGILVSKFPKDTSASYSLQEPNEVMNFL 348
>Glyma11g38230.1
Length = 363
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 28/35 (80%)
Query: 2 LREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFL 36
LR+ +G+GILVS PK+T+A YSL++P EVM FL
Sbjct: 314 LRDRGQGFGILVSKFPKDTSASYSLQEPNEVMNFL 348
>Glyma05g31350.1
Length = 362
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 27/36 (75%)
Query: 2 LREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFLN 37
LR+ +G+GILVS PK+T A YSL++P EVM FL
Sbjct: 309 LRDRGQGFGILVSKFPKDTTASYSLQEPNEVMDFLQ 344