Jatropha Genome Database

JcCB0115461.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0115461.20 + phase: 0 /partial
         (92 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g09300.1                                                        78   2e-15
Glyma03g07780.1                                                        55   1e-08
Glyma05g02090.1                                                        51   2e-07
Glyma07g35720.1                                                        50   6e-07
Glyma09g09240.1                                                        46   7e-06

>Glyma13g09300.1 
          Length = 177

 Score = 77.8 bits (190), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 58/92 (63%)

Query: 1   GMQIREINGGVYVFQFFHEVDVHRVLLMCPCTFDNQLLLLERLGSYPTSLDVPLFFVPLW 60
           G+ I  I  G ++F+F+H+VD+ RVL      FD  +L+L  +      L++PLF VP W
Sbjct: 10  GVTISYIGNGTFLFRFYHQVDIQRVLKGGSWRFDRYMLILGVITEDENPLEIPLFNVPFW 69

Query: 61  VQVKGLRSGFRSERVLKDMGDRIGQFMEADSK 92
           VQ+  L  GF S+RV +++G+ +G+F+E D K
Sbjct: 70  VQIHNLPLGFMSKRVGQNIGNYLGKFLEYDEK 101


>Glyma03g07780.1 
          Length = 283

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%)

Query: 1   GMQIREINGGVYVFQFFHEVDVHRVLLMCPCTFDNQLLLLERLGSYPTSLDVPLFFVPLW 60
           G+ I  +  G  +FQF+H VD   VL   P +FD  +L+L  +        V LF +P  
Sbjct: 117 GIIISNLEAGRVLFQFYHVVDYQIVLKGGPGSFDRNMLILGVIKEGDDPKIVSLFCIPFL 176

Query: 61  VQVKGLRSGFRSERVLKDMGDRIGQFMEADSK 92
           VQ+  L  GF S+ V + +G+ I Q+++ D K
Sbjct: 177 VQIHNLPMGFMSQMVGESIGNFIDQYLDYDEK 208


>Glyma05g02090.1 
          Length = 129

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 43/73 (58%)

Query: 20 VDVHRVLLMCPCTFDNQLLLLERLGSYPTSLDVPLFFVPLWVQVKGLRSGFRSERVLKDM 79
          +DV R+L   P +FD  LL+L  +    +   VPL+ VP WVQ   + + F +    +++
Sbjct: 1  LDVQRILKRGPWSFDGHLLVLGVIKEGESPSQVPLYTVPFWVQEHNIPAAFMTFAPGQNI 60

Query: 80 GDRIGQFMEADSK 92
          G+ +G+F+E ++K
Sbjct: 61 GNYLGEFLEYNNK 73


>Glyma07g35720.1 
          Length = 124

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 41/71 (57%)

Query: 22 VHRVLLMCPCTFDNQLLLLERLGSYPTSLDVPLFFVPLWVQVKGLRSGFRSERVLKDMGD 81
          V R++     + DN +L+L RL +      +PLF +P WVQ+  + +GF +  V K M +
Sbjct: 1  VERIVESGSWSLDNHMLVLGRLSAGDMLTQIPLFNIPFWVQLHDVPTGFVTPMVGKHMEN 60

Query: 82 RIGQFMEADSK 92
           I +F+E DSK
Sbjct: 61 FIREFLEYDSK 71


>Glyma09g09240.1 
          Length = 208

 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 11/91 (12%)

Query: 2   MQIREINGGVYVFQFFHEVDVHRVLLMCPCTFDNQLLLLERLGSYPTSLDVPLFFVPLWV 61
           + I E+    ++F F+H+VDV R +L+      +     E L S      +PL+ +  WV
Sbjct: 37  ITIDELQPNHFLFLFYHKVDVQRYMLILGSKRSD-----ENLKS------IPLYMLAFWV 85

Query: 62  QVKGLRSGFRSERVLKDMGDRIGQFMEADSK 92
           Q+  L  GF ++ + +++G+ I  F+E D K
Sbjct: 86  QIHNLPLGFMTQVIGQNLGNFIVNFLEYDEK 116