Jatropha Genome Database

JcCB0115461.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0115461.10 - phase: 0 /partial
         (340 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g12100.1                                                       591   e-169
Glyma09g01270.1                                                       589   e-168
Glyma09g01270.2                                                       589   e-168
Glyma03g20850.1                                                       123   4e-28
Glyma12g15210.1                                                       114   2e-25

>Glyma15g12100.1 
          Length = 421

 Score =  591 bits (1523), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 274/339 (80%), Positives = 306/339 (90%)

Query: 2   ALKSFIDVHPDSHFPIQNLPYGVFKPQPSSPPRPAVAIGDYVLDLSEIALAGLFDGPILK 61
            L+SF+ VHPDSHFPIQNLPYGVFKPQ +SPPRP VAIGD+VLDLSEI+ AGLFDGP+LK
Sbjct: 3   VLQSFVSVHPDSHFPIQNLPYGVFKPQSASPPRPGVAIGDFVLDLSEISSAGLFDGPLLK 62

Query: 62  GSDCFLQLNLNKFVAMGRPAWKEARATLQKLLSSTEPTLRDNASLRQKSLVLMSKVELLV 121
            SDCFLQ NLNKFV++GRPAWKEARATLQKLLS+TEPTLRDN  LRQKSL+ +S VELL+
Sbjct: 63  NSDCFLQPNLNKFVSLGRPAWKEARATLQKLLSATEPTLRDNVVLRQKSLLPVSTVELLL 122

Query: 122 PIAIGDYTDFFSSMHHAKNCGTIFRGPQNPIPANWFHLPIAYHGRASSIVISGTDIVRPR 181
           P+ +GDYTDFF+S+HH KNCG IFRGPQ P+  NW+ LP+AYHGRASS+VISGTDIVRPR
Sbjct: 123 PVVVGDYTDFFTSLHHTKNCGLIFRGPQTPVLDNWYRLPVAYHGRASSVVISGTDIVRPR 182

Query: 182 GQGHPTGNSPPYFGPSMKLDFELEMAAVVGPGNELGKPVDVNEAGDHIFGLVLMNDWSAR 241
           GQ HP G+S PYFGPS+KLDFELEMA +VGPGNELGKPVD+N A DHIFGLV+MNDWSAR
Sbjct: 183 GQAHPIGSSTPYFGPSLKLDFELEMATIVGPGNELGKPVDINNAEDHIFGLVVMNDWSAR 242

Query: 242 DIQAWEYVPLGPFLGKSFGTTISPWIVTLDALEPFACDAPKQDPQPLPYLAEKISKNYDI 301
           DIQAWEY+PLGPFLGKSFGTTISPWIVTL+ALEPFAC+APKQDP PLPYL EK+S+ YDI
Sbjct: 243 DIQAWEYIPLGPFLGKSFGTTISPWIVTLEALEPFACEAPKQDPPPLPYLTEKVSRIYDI 302

Query: 302 SLEVQIKPTGQEDSTVVTRSNFKHLYWTLTQQLAHHTIN 340
           SLE  IKP G EDS VV+R+N KHLYWTLTQQLAHHTIN
Sbjct: 303 SLEAHIKPAGHEDSGVVSRTNLKHLYWTLTQQLAHHTIN 341


>Glyma09g01270.1 
          Length = 421

 Score =  589 bits (1518), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 276/338 (81%), Positives = 304/338 (89%)

Query: 3   LKSFIDVHPDSHFPIQNLPYGVFKPQPSSPPRPAVAIGDYVLDLSEIALAGLFDGPILKG 62
           L+SF+ VHPDSHFPIQNLPYGVFKPQ +SPPRP VAIGD+VLDLSEI+ AGLFDGP+LK 
Sbjct: 4   LQSFVSVHPDSHFPIQNLPYGVFKPQSASPPRPGVAIGDFVLDLSEISSAGLFDGPLLKN 63

Query: 63  SDCFLQLNLNKFVAMGRPAWKEARATLQKLLSSTEPTLRDNASLRQKSLVLMSKVELLVP 122
           SD FLQ NLNKFV++GRPAWKEARATLQKLLS+TEPTLRDNA LRQK+LV MS VELL+P
Sbjct: 64  SDAFLQPNLNKFVSLGRPAWKEARATLQKLLSATEPTLRDNAVLRQKALVPMSSVELLLP 123

Query: 123 IAIGDYTDFFSSMHHAKNCGTIFRGPQNPIPANWFHLPIAYHGRASSIVISGTDIVRPRG 182
           +A+GDYTDFF+S+HH KNCG IFRGPQ P+  NW+ LP+AYHGRASS+VISGTDIVRPRG
Sbjct: 124 VAVGDYTDFFTSLHHTKNCGIIFRGPQTPVLDNWYRLPVAYHGRASSVVISGTDIVRPRG 183

Query: 183 QGHPTGNSPPYFGPSMKLDFELEMAAVVGPGNELGKPVDVNEAGDHIFGLVLMNDWSARD 242
           Q HP G+S PYFGPS+KLDFELEMA +VGPGNELGKPVD+N A DHIFGLVLMNDWSARD
Sbjct: 184 QAHPVGSSTPYFGPSLKLDFELEMATIVGPGNELGKPVDINNAKDHIFGLVLMNDWSARD 243

Query: 243 IQAWEYVPLGPFLGKSFGTTISPWIVTLDALEPFACDAPKQDPQPLPYLAEKISKNYDIS 302
           IQAWEY+PLGPFLGKSFGTTISPWIVTL+ALEPFA +APKQDP PLPYL EK  K YDIS
Sbjct: 244 IQAWEYIPLGPFLGKSFGTTISPWIVTLEALEPFASEAPKQDPSPLPYLTEKEPKIYDIS 303

Query: 303 LEVQIKPTGQEDSTVVTRSNFKHLYWTLTQQLAHHTIN 340
           LE  IKP G EDS VV+R+N KHLYWTLTQQLAHHTIN
Sbjct: 304 LEAHIKPAGHEDSGVVSRTNLKHLYWTLTQQLAHHTIN 341


>Glyma09g01270.2 
          Length = 370

 Score =  589 bits (1518), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 276/339 (81%), Positives = 304/339 (89%)

Query: 2   ALKSFIDVHPDSHFPIQNLPYGVFKPQPSSPPRPAVAIGDYVLDLSEIALAGLFDGPILK 61
            L+SF+ VHPDSHFPIQNLPYGVFKPQ +SPPRP VAIGD+VLDLSEI+ AGLFDGP+LK
Sbjct: 3   VLQSFVSVHPDSHFPIQNLPYGVFKPQSASPPRPGVAIGDFVLDLSEISSAGLFDGPLLK 62

Query: 62  GSDCFLQLNLNKFVAMGRPAWKEARATLQKLLSSTEPTLRDNASLRQKSLVLMSKVELLV 121
            SD FLQ NLNKFV++GRPAWKEARATLQKLLS+TEPTLRDNA LRQK+LV MS VELL+
Sbjct: 63  NSDAFLQPNLNKFVSLGRPAWKEARATLQKLLSATEPTLRDNAVLRQKALVPMSSVELLL 122

Query: 122 PIAIGDYTDFFSSMHHAKNCGTIFRGPQNPIPANWFHLPIAYHGRASSIVISGTDIVRPR 181
           P+A+GDYTDFF+S+HH KNCG IFRGPQ P+  NW+ LP+AYHGRASS+VISGTDIVRPR
Sbjct: 123 PVAVGDYTDFFTSLHHTKNCGIIFRGPQTPVLDNWYRLPVAYHGRASSVVISGTDIVRPR 182

Query: 182 GQGHPTGNSPPYFGPSMKLDFELEMAAVVGPGNELGKPVDVNEAGDHIFGLVLMNDWSAR 241
           GQ HP G+S PYFGPS+KLDFELEMA +VGPGNELGKPVD+N A DHIFGLVLMNDWSAR
Sbjct: 183 GQAHPVGSSTPYFGPSLKLDFELEMATIVGPGNELGKPVDINNAKDHIFGLVLMNDWSAR 242

Query: 242 DIQAWEYVPLGPFLGKSFGTTISPWIVTLDALEPFACDAPKQDPQPLPYLAEKISKNYDI 301
           DIQAWEY+PLGPFLGKSFGTTISPWIVTL+ALEPFA +APKQDP PLPYL EK  K YDI
Sbjct: 243 DIQAWEYIPLGPFLGKSFGTTISPWIVTLEALEPFASEAPKQDPSPLPYLTEKEPKIYDI 302

Query: 302 SLEVQIKPTGQEDSTVVTRSNFKHLYWTLTQQLAHHTIN 340
           SLE  IKP G EDS VV+R+N KHLYWTLTQQLAHHTIN
Sbjct: 303 SLEAHIKPAGHEDSGVVSRTNLKHLYWTLTQQLAHHTIN 341


>Glyma03g20850.1 
          Length = 204

 Score =  123 bits (308), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/172 (44%), Positives = 92/172 (53%), Gaps = 48/172 (27%)

Query: 178 VRPRGQGHPTGNSPPYFGPSMKLDFELEMAAV-----------VGPGNELGKPVDVNEAG 226
           V  RGQ HP G+  PYFGPS+KLDFELEM  V           VGPGNELGKPVD+N A 
Sbjct: 19  VHSRGQAHPVGSFTPYFGPSLKLDFELEMVEVKHCFIFFFATNVGPGNELGKPVDINYAQ 78

Query: 227 DHIFGLVLMNDWSAR-----------DIQAWEY-VPLGP--FLGKSFG-------TTISP 265
           DHIFGLVL+NDWS              I+ W + + + P   + ++         TTISP
Sbjct: 79  DHIFGLVLLNDWSGIGIYFSWSIYCPKIKTWAFGLAIYPTWMIARTISSRSLYSCTTISP 138

Query: 266 WIVTLDALEPFACDAPKQ--------DP--------QPLPYLAEKISKNYDI 301
           WIVT++ALEPFA + PKQ        DP        +  PY   KI   Y I
Sbjct: 139 WIVTMEALEPFARETPKQGLWTLEGADPKFYSAVAVEEFPYFINKIPGFYQI 190


>Glyma12g15210.1 
          Length = 188

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/164 (44%), Positives = 87/164 (53%), Gaps = 47/164 (28%)

Query: 182 GQGHPTGNSPPYFGPSMKLDFELEMAAV-----------VGPGNELGKPVDVNEAGDHIF 230
           GQ HP G+  PYFGPS+KLDFELEM  V           V PGNELGKPVD+N A DHIF
Sbjct: 1   GQAHPVGSFIPYFGPSLKLDFELEMVEVKHCFIFFFATNVEPGNELGKPVDINNAEDHIF 60

Query: 231 GLVLMNDWSARDIQAWEYVPLGPFLGKS----------FG-------------------- 260
           GLVL+NDWS  +     Y  +G +   S          FG                    
Sbjct: 61  GLVLLNDWSVLNNS--RYSGIGIYFSWSISCPMEKTWAFGLAIYPTWMIARTICSRSLYS 118

Query: 261 -TTISPWIVTLDALEPFACDAPKQDPQPLPYLAEKISKNYDISL 303
            TTISPWIVT++ALEPFA + PK   Q L   +EK+S   ++ L
Sbjct: 119 CTTISPWIVTMEALEPFARETPK---QLLILASEKVSDLVELRL 159