Jatropha Genome Database

JcCB0113371.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0113371.10 + phase: 2 /partial
         (182 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g11870.4                                                       313   6e-86
Glyma09g11870.1                                                       313   6e-86
Glyma13g25410.1                                                       306   7e-84
Glyma13g26120.1                                                       301   2e-82
Glyma13g25430.1                                                       232   2e-61
Glyma13g25790.1                                                       215   2e-56
Glyma13g25930.1                                                       164   4e-41
Glyma13g25760.1                                                       156   1e-38
Glyma09g11870.3                                                       152   2e-37
Glyma09g11870.2                                                       152   2e-37

>Glyma09g11870.4 
          Length = 190

 Score =  313 bits (802), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 146/160 (91%), Positives = 153/160 (95%)

Query: 14  VSNGHVKRPHDEDIQSNVLEIVGSNIQSTYITCPVDPAATLGIKLPFLVMIVKNLKKYFT 73
           V +GH+KR  DEDIQSNVLEI+GSNIQSTYITCP DPA TLGIKLPFLV+IVKNLKKYFT
Sbjct: 29  VVDGHIKRLQDEDIQSNVLEIIGSNIQSTYITCPADPATTLGIKLPFLVIIVKNLKKYFT 88

Query: 74  FEIQVLDDKNVRRRFRASNFQAITRVKPYICTMPLKMDEGWNQIQLNLADFTRRAYGTNY 133
           FEIQVLDDKNVRRRFRASNFQA+TRVKPYICTMPL+MDEGWNQIQ NL DFT+RAYGTNY
Sbjct: 89  FEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRMDEGWNQIQFNLVDFTKRAYGTNY 148

Query: 134 VETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 173
           VETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ
Sbjct: 149 VETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 188


>Glyma09g11870.1 
          Length = 190

 Score =  313 bits (802), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 146/160 (91%), Positives = 153/160 (95%)

Query: 14  VSNGHVKRPHDEDIQSNVLEIVGSNIQSTYITCPVDPAATLGIKLPFLVMIVKNLKKYFT 73
           V +GH+KR  DEDIQSNVLEI+GSNIQSTYITCP DPA TLGIKLPFLV+IVKNLKKYFT
Sbjct: 29  VVDGHIKRLQDEDIQSNVLEIIGSNIQSTYITCPADPATTLGIKLPFLVIIVKNLKKYFT 88

Query: 74  FEIQVLDDKNVRRRFRASNFQAITRVKPYICTMPLKMDEGWNQIQLNLADFTRRAYGTNY 133
           FEIQVLDDKNVRRRFRASNFQA+TRVKPYICTMPL+MDEGWNQIQ NL DFT+RAYGTNY
Sbjct: 89  FEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRMDEGWNQIQFNLVDFTKRAYGTNY 148

Query: 134 VETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 173
           VETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ
Sbjct: 149 VETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 188


>Glyma13g25410.1 
          Length = 160

 Score =  306 bits (784), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 145/163 (88%), Positives = 155/163 (95%), Gaps = 3/163 (1%)

Query: 14  VSNGHVKRPHDEDIQSNVLEIVGSNIQSTYITCPVDPAATLGIKLPFLVMIVKNLKKYFT 73
           V NGHVKRP DEDIQSNVLEI+GSNIQSTYITCP   AAT+GIKLPFLV+IVKNLKKYFT
Sbjct: 1   VVNGHVKRPQDEDIQSNVLEIIGSNIQSTYITCP---AATIGIKLPFLVLIVKNLKKYFT 57

Query: 74  FEIQVLDDKNVRRRFRASNFQAITRVKPYICTMPLKMDEGWNQIQLNLADFTRRAYGTNY 133
           FEIQVLDDKNVRRRFRASNFQA+TRVKP +CTMPL+MDEGWNQIQ NLADFT+RAYGTNY
Sbjct: 58  FEIQVLDDKNVRRRFRASNFQAVTRVKPSMCTMPLRMDEGWNQIQFNLADFTKRAYGTNY 117

Query: 134 VETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQVRV 176
           V TLRVQVHANCRLRRIYFSDRLYSEEE+PPEFKLYLPMQ+R+
Sbjct: 118 VGTLRVQVHANCRLRRIYFSDRLYSEEEVPPEFKLYLPMQIRL 160


>Glyma13g26120.1 
          Length = 155

 Score =  301 bits (772), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 141/154 (91%), Positives = 148/154 (96%)

Query: 14  VSNGHVKRPHDEDIQSNVLEIVGSNIQSTYITCPVDPAATLGIKLPFLVMIVKNLKKYFT 73
           V +GH+KR  DEDIQSNVLEI+GSNIQSTYITCP DPAATLGIKLPFLV+IVKNLKKYFT
Sbjct: 1   VVDGHIKRLQDEDIQSNVLEIIGSNIQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFT 60

Query: 74  FEIQVLDDKNVRRRFRASNFQAITRVKPYICTMPLKMDEGWNQIQLNLADFTRRAYGTNY 133
           FEIQVLDDKNVRRRFRASNFQA+TRVKPYICTMPL+MDEGWNQIQ NL DFT+RAYGTNY
Sbjct: 61  FEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRMDEGWNQIQFNLVDFTKRAYGTNY 120

Query: 134 VETLRVQVHANCRLRRIYFSDRLYSEEELPPEFK 167
           VETLRVQVHANCRLRRIYFSDRLYSEEELPPEFK
Sbjct: 121 VETLRVQVHANCRLRRIYFSDRLYSEEELPPEFK 154


>Glyma13g25430.1 
          Length = 150

 Score =  232 bits (591), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 116/155 (74%), Positives = 127/155 (81%), Gaps = 10/155 (6%)

Query: 14  VSNGHVKRPHDEDIQSNVLEIVGSNIQSTYITCPVDPAATLGIKLPFLVMIVKNLKKYFT 73
           V NGHVKRP DEDIQSNVLEI+GSNIQSTYITCP DPAATLGIKLPFLV+IVKNL KYFT
Sbjct: 1   VVNGHVKRPQDEDIQSNVLEIIGSNIQSTYITCPADPAATLGIKLPFLVLIVKNLMKYFT 60

Query: 74  FEIQVLDDKNVRRRFRASNFQAITRVKPYICTMPLKMDEGWNQIQLNLADFTRRAYGTNY 133
           FEIQVLDDKNVRRRFRASNFQA+TRVKPY+CTMPL+MDEGWNQI       + R      
Sbjct: 61  FEIQVLDDKNVRRRFRASNFQAVTRVKPYMCTMPLRMDEGWNQIHSLTWLISPR------ 114

Query: 134 VETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKL 168
            E + + +  +C   +IYFSDRLYSEEELPPEFK 
Sbjct: 115 -EHMVLIMWRHC---KIYFSDRLYSEEELPPEFKF 145


>Glyma13g25790.1 
          Length = 179

 Score =  215 bits (548), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 119/181 (65%), Positives = 130/181 (71%), Gaps = 20/181 (11%)

Query: 14  VSNGHVKRPHDEDIQSNVLEIVGSNIQSTYITCPVDPAATLGIKLPFLVMIVKNLKKYFT 73
           V N HVKRP DEDIQSNVLEI+GSNIQSTYITCP DPAATLGIKLPFLV+IVKNLKKYFT
Sbjct: 1   VVNAHVKRPQDEDIQSNVLEIIGSNIQSTYITCPADPAATLGIKLPFLVLIVKNLKKYFT 60

Query: 74  FEIQVLDDKNVRRRFRASNFQAITRVKPYICTMPLKMDE--------------GWNQIQL 119
           FEIQVLDDKNVRRRF+ASNFQ  +     I  M L+ DE                N I++
Sbjct: 61  FEIQVLDDKNVRRRFQASNFQLESLRG--ILVMFLESDEIHIFLLHLHLISLYVQNCIEI 118

Query: 120 NLADFTRR----AYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQVR 175
            L+    R    +  T  +      VHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQVR
Sbjct: 119 KLSLGMMRGGIKSSLTWLISPREHMVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQVR 178

Query: 176 V 176
           +
Sbjct: 179 L 179


>Glyma13g25930.1 
          Length = 92

 Score =  164 bits (416), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 75/82 (91%), Positives = 80/82 (97%)

Query: 95  AITRVKPYICTMPLKMDEGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSD 154
           A+TRVKPY+CTMPL+MDEGWNQIQ NLADFT+RAYGTNYVETLRVQVHANC LRRIYFSD
Sbjct: 11  AVTRVKPYMCTMPLRMDEGWNQIQFNLADFTKRAYGTNYVETLRVQVHANCCLRRIYFSD 70

Query: 155 RLYSEEELPPEFKLYLPMQVRV 176
           RLYSEEELPPEFKLYLPMQVR+
Sbjct: 71  RLYSEEELPPEFKLYLPMQVRL 92


>Glyma13g25760.1 
          Length = 103

 Score =  156 bits (395), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 74/81 (91%), Positives = 77/81 (95%)

Query: 14 VSNGHVKRPHDEDIQSNVLEIVGSNIQSTYITCPVDPAATLGIKLPFLVMIVKNLKKYFT 73
          V NGHV+RP DEDIQSNVLEI+GSNIQSTYITCP DPAATLGIKLPFLV+IVKNL KYFT
Sbjct: 5  VVNGHVERPQDEDIQSNVLEIIGSNIQSTYITCPADPAATLGIKLPFLVLIVKNLMKYFT 64

Query: 74 FEIQVLDDKNVRRRFRASNFQ 94
          FEIQVLDDKNVRRRFRASNFQ
Sbjct: 65 FEIQVLDDKNVRRRFRASNFQ 85


>Glyma09g11870.3 
          Length = 127

 Score =  152 bits (384), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 72/81 (88%), Positives = 76/81 (93%)

Query: 14  VSNGHVKRPHDEDIQSNVLEIVGSNIQSTYITCPVDPAATLGIKLPFLVMIVKNLKKYFT 73
           V +GH+KR  DEDIQSNVLEI+GSNIQSTYITCP DPA TLGIKLPFLV+IVKNLKKYFT
Sbjct: 29  VVDGHIKRLQDEDIQSNVLEIIGSNIQSTYITCPADPATTLGIKLPFLVIIVKNLKKYFT 88

Query: 74  FEIQVLDDKNVRRRFRASNFQ 94
           FEIQVLDDKNVRRRFRASNFQ
Sbjct: 89  FEIQVLDDKNVRRRFRASNFQ 109


>Glyma09g11870.2 
          Length = 127

 Score =  152 bits (384), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 72/81 (88%), Positives = 76/81 (93%)

Query: 14  VSNGHVKRPHDEDIQSNVLEIVGSNIQSTYITCPVDPAATLGIKLPFLVMIVKNLKKYFT 73
           V +GH+KR  DEDIQSNVLEI+GSNIQSTYITCP DPA TLGIKLPFLV+IVKNLKKYFT
Sbjct: 29  VVDGHIKRLQDEDIQSNVLEIIGSNIQSTYITCPADPATTLGIKLPFLVIIVKNLKKYFT 88

Query: 74  FEIQVLDDKNVRRRFRASNFQ 94
           FEIQVLDDKNVRRRFRASNFQ
Sbjct: 89  FEIQVLDDKNVRRRFRASNFQ 109