Jatropha Genome Database

JcCB0112721.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0112721.10 - phase: 0 /pseudo
         (329 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g45270.1                                                       410   e-114
Glyma09g40560.1                                                       407   e-113
Glyma15g38570.1                                                       101   1e-21

>Glyma18g45270.1 
          Length = 429

 Score =  410 bits (1053), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 203/305 (66%), Positives = 233/305 (76%), Gaps = 23/305 (7%)

Query: 1   MDPVLPIAVLSVLLGALIAFLFFKSYSHKRESEIKSITKPE-----LDSAPKKP-TKPAQ 54
           MDP LPI  LS+LLGA+IAFLFF +Y  KR+SEI+SI  P        + PKKP +KP  
Sbjct: 1   MDPALPIVALSLLLGAIIAFLFFSTYYRKRQSEIQSIADPNPKPLSSKAPPKKPLSKP-- 58

Query: 55  PVTXXXXXXXXXXXXXASDKDQIKRHHPLDLNTLKGHGDSVNGLCFSNDGRSLATACGDG 114
                           +SDKDQ KRHHPLDLNTLKGHGD+V G+CFS DGR+LATAC DG
Sbjct: 59  ---------------HSSDKDQNKRHHPLDLNTLKGHGDAVTGICFSPDGRNLATACADG 103

Query: 115 VVRVFKLDDASSKSFKFLRISVPAGGHPXXXXXXXXXXXXXXXXQTLSGASLYMFGEEKV 174
           VVRVFKLDDASSKSFKFLRI++PAGGHP                 TLSG SLYM+GEEK 
Sbjct: 104 VVRVFKLDDASSKSFKFLRINLPAGGHPTAVAFSDDASSIVVASYTLSGCSLYMYGEEKP 163

Query: 175 KPNESKQQSKLPLPEVKWEHHKIHDKNAVLTLVGTAATYGTADGSAIVASCSEATDIKLW 234
           K +E K Q+KLPLPE+KWEHHK+HDK +++T+ G +ATYGTADGS IVASCSE TDI LW
Sbjct: 164 KTSEDKPQTKLPLPEIKWEHHKVHDKKSIITMFGASATYGTADGSTIVASCSEGTDIILW 223

Query: 235 YGRTGKILGNVDTNQLKNTMATVSPNGRFIAAAAFTADVKVWEIVYSKDGSVKEVPKVMQ 294
           +G+TGK +G+VDTNQLKN MAT+SPNGRFIAAAAFTADVK+WEIVY+KDGSVKEV  VMQ
Sbjct: 224 HGKTGKSVGHVDTNQLKNNMATISPNGRFIAAAAFTADVKIWEIVYAKDGSVKEVLNVMQ 283

Query: 295 LKGHK 299
           LKGHK
Sbjct: 284 LKGHK 288


>Glyma09g40560.1 
          Length = 435

 Score =  407 bits (1045), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 198/299 (66%), Positives = 230/299 (76%), Gaps = 5/299 (1%)

Query: 1   MDPVLPIAVLSVLLGALIAFLFFKSYSHKRESEIKSITKPELDSAPKKPTKPAQPVTXXX 60
           MDP LPI  LS+LLGA+IAFL F +Y  KR+SEI+SI  P     P   + P + V+   
Sbjct: 1   MDPALPIVALSLLLGAIIAFLIFNTYFCKRQSEIRSIADPN----PNSNSNP-KLVSSKP 55

Query: 61  XXXXXXXXXXASDKDQIKRHHPLDLNTLKGHGDSVNGLCFSNDGRSLATACGDGVVRVFK 120
                     +SDKDQ KRHHPLDLNTLKGHGD+V G+CFS DGR+LATAC DGVVRVFK
Sbjct: 56  PPKKPLSKPHSSDKDQNKRHHPLDLNTLKGHGDAVTGVCFSRDGRNLATACADGVVRVFK 115

Query: 121 LDDASSKSFKFLRISVPAGGHPXXXXXXXXXXXXXXXXQTLSGASLYMFGEEKVKPNESK 180
           LDDASSKSFKFLRI++PAGGHP                 TLSG SLYM+GEEK K +E K
Sbjct: 116 LDDASSKSFKFLRINLPAGGHPTAVAFSDDASSIVVASYTLSGCSLYMYGEEKPKTSEDK 175

Query: 181 QQSKLPLPEVKWEHHKIHDKNAVLTLVGTAATYGTADGSAIVASCSEATDIKLWYGRTGK 240
            Q+KLPLPE+KWEHHK+HDK +++T+ G +ATYGTADGS I+ASCSE TDI LW+G+TGK
Sbjct: 176 PQAKLPLPEIKWEHHKVHDKKSIITMFGASATYGTADGSTIIASCSEGTDIILWHGKTGK 235

Query: 241 ILGNVDTNQLKNTMATVSPNGRFIAAAAFTADVKVWEIVYSKDGSVKEVPKVMQLKGHK 299
            +G+VDTNQLKN MAT+SPNGRFIAAAAFTADVK+WEIVY+KDGSVKEV  VMQLKGHK
Sbjct: 236 SVGHVDTNQLKNNMATISPNGRFIAAAAFTADVKIWEIVYAKDGSVKEVLNVMQLKGHK 294


>Glyma15g38570.1 
          Length = 152

 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 50/74 (67%), Positives = 57/74 (77%), Gaps = 2/74 (2%)

Query: 229 TDIKLWYGRTGKILGNVDTNQLKNTMATVSPNGRFIAAAAFTADVKVWEIVYSKDGSVKE 288
           TDI  W G+ GKI+G+VDTNQLKN MAT+SPN  FIAAA FT DVK  EIVY+ DGSVK+
Sbjct: 36  TDIIFWLGKIGKIVGHVDTNQLKNNMATISPNDHFIAAATFTVDVK--EIVYANDGSVKK 93

Query: 289 VPKVMQLKGHKVTT 302
           V  VM LKGHK  +
Sbjct: 94  VLNVMHLKGHKCQS 107