Jatropha Genome Database

JcCB0111501.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0111501.20 + phase: 0 /pseudo
         (151 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g04820.1                                                       285   2e-77
Glyma11g12610.1                                                       284   3e-77
Glyma11g12610.2                                                       283   4e-77
Glyma06g01520.1                                                       282   1e-76
Glyma04g01470.1                                                       259   6e-70
Glyma06g34860.1                                                       221   2e-58

>Glyma12g04820.1 
          Length = 887

 Score =  285 bits (728), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 136/145 (93%), Positives = 143/145 (98%)

Query: 1   MAQPLIKKDDDRDDEAEFSPFLGIEKGAVLQEARVFNDPQLDPRKCSQVITKLLYLLNQG 60
           MAQPL+KKDDDRDDEAE+SPFLGIEKGAVLQEARVFNDPQLD R+CSQVITKLLYLLNQG
Sbjct: 1   MAQPLVKKDDDRDDEAEYSPFLGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQG 60

Query: 61  ETFTKVEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMNSKSD 120
           ETFTK EATEVFF+VTKLFQSRD+GLRRMVYL+IKELSPSADEVIIVTSSLMKDMNSK+D
Sbjct: 61  ETFTKTEATEVFFSVTKLFQSRDLGLRRMVYLIIKELSPSADEVIIVTSSLMKDMNSKTD 120

Query: 121 MYRANAIRVLCRITDGTLLTQIERY 145
           MYRANAIRVLCRITDGTLLTQIERY
Sbjct: 121 MYRANAIRVLCRITDGTLLTQIERY 145


>Glyma11g12610.1 
          Length = 887

 Score =  284 bits (726), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 135/145 (93%), Positives = 143/145 (98%)

Query: 1   MAQPLIKKDDDRDDEAEFSPFLGIEKGAVLQEARVFNDPQLDPRKCSQVITKLLYLLNQG 60
           M+QPL+KKDDDRDDEAE+SPFLGIEKGAVLQEARVFNDPQLD R+CSQVITKLLYLLNQG
Sbjct: 1   MSQPLVKKDDDRDDEAEYSPFLGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQG 60

Query: 61  ETFTKVEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMNSKSD 120
           ETFTK EATEVFF+VTKLFQSRD+GLRRMVYL+IKELSPSADEVIIVTSSLMKDMNSK+D
Sbjct: 61  ETFTKTEATEVFFSVTKLFQSRDLGLRRMVYLIIKELSPSADEVIIVTSSLMKDMNSKTD 120

Query: 121 MYRANAIRVLCRITDGTLLTQIERY 145
           MYRANAIRVLCRITDGTLLTQIERY
Sbjct: 121 MYRANAIRVLCRITDGTLLTQIERY 145


>Glyma11g12610.2 
          Length = 759

 Score =  283 bits (725), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 135/145 (93%), Positives = 143/145 (98%)

Query: 1   MAQPLIKKDDDRDDEAEFSPFLGIEKGAVLQEARVFNDPQLDPRKCSQVITKLLYLLNQG 60
           M+QPL+KKDDDRDDEAE+SPFLGIEKGAVLQEARVFNDPQLD R+CSQVITKLLYLLNQG
Sbjct: 1   MSQPLVKKDDDRDDEAEYSPFLGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQG 60

Query: 61  ETFTKVEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMNSKSD 120
           ETFTK EATEVFF+VTKLFQSRD+GLRRMVYL+IKELSPSADEVIIVTSSLMKDMNSK+D
Sbjct: 61  ETFTKTEATEVFFSVTKLFQSRDLGLRRMVYLIIKELSPSADEVIIVTSSLMKDMNSKTD 120

Query: 121 MYRANAIRVLCRITDGTLLTQIERY 145
           MYRANAIRVLCRITDGTLLTQIERY
Sbjct: 121 MYRANAIRVLCRITDGTLLTQIERY 145


>Glyma06g01520.1 
          Length = 882

 Score =  282 bits (721), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 134/145 (92%), Positives = 143/145 (98%)

Query: 1   MAQPLIKKDDDRDDEAEFSPFLGIEKGAVLQEARVFNDPQLDPRKCSQVITKLLYLLNQG 60
           MAQPL+KKDDDRDDEAE+SPFLG+EKG+VLQEARVFNDPQLD R+CSQVITKLLYLLNQG
Sbjct: 1   MAQPLVKKDDDRDDEAEYSPFLGLEKGSVLQEARVFNDPQLDARRCSQVITKLLYLLNQG 60

Query: 61  ETFTKVEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMNSKSD 120
           ETFTKVEATEVFFAVTKLFQS+D+GLRRMVYLMIKE+SPSADEVIIVTSSLMKDMNSK D
Sbjct: 61  ETFTKVEATEVFFAVTKLFQSKDMGLRRMVYLMIKEISPSADEVIIVTSSLMKDMNSKID 120

Query: 121 MYRANAIRVLCRITDGTLLTQIERY 145
           MYRANAIRVLCRITDGTLL+QIERY
Sbjct: 121 MYRANAIRVLCRITDGTLLSQIERY 145


>Glyma04g01470.1 
          Length = 886

 Score =  259 bits (663), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 134/145 (92%), Positives = 142/145 (97%)

Query: 1   MAQPLIKKDDDRDDEAEFSPFLGIEKGAVLQEARVFNDPQLDPRKCSQVITKLLYLLNQG 60
           MAQPL+KKDDDRDDEA++SPFLGIEKG+VLQEARVFNDPQLD R+CSQVITKLLYLLNQG
Sbjct: 1   MAQPLVKKDDDRDDEADYSPFLGIEKGSVLQEARVFNDPQLDARRCSQVITKLLYLLNQG 60

Query: 61  ETFTKVEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMNSKSD 120
           ETFTKVEATEVFFAVTKLFQS+D GLRRMVYLMIKE+SPSADEVIIVTSSLMKDMNSK D
Sbjct: 61  ETFTKVEATEVFFAVTKLFQSKDTGLRRMVYLMIKEISPSADEVIIVTSSLMKDMNSKID 120

Query: 121 MYRANAIRVLCRITDGTLLTQIERY 145
           MYRANAIRVLCRITDGTLL+QIERY
Sbjct: 121 MYRANAIRVLCRITDGTLLSQIERY 145


>Glyma06g34860.1 
          Length = 260

 Score =  221 bits (563), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 105/124 (84%), Positives = 117/124 (94%)

Query: 22  LGIEKGAVLQEARVFNDPQLDPRKCSQVITKLLYLLNQGETFTKVEATEVFFAVTKLFQS 81
           +GIEKG+VLQEARVFNDPQLD R+CSQVITKLLYLLNQGETFTKV+AT+ FF VTKLFQS
Sbjct: 1   MGIEKGSVLQEARVFNDPQLDARRCSQVITKLLYLLNQGETFTKVKATKFFFPVTKLFQS 60

Query: 82  RDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMNSKSDMYRANAIRVLCRITDGTLLTQ 141
           +D+GLRRMVYLMI E+SPSA EVIIVTSS+MKDMN+K DMYRAN+I VLCRITDGTLL+Q
Sbjct: 61  KDMGLRRMVYLMINEISPSAYEVIIVTSSIMKDMNNKIDMYRANSILVLCRITDGTLLSQ 120

Query: 142 IERY 145
           IERY
Sbjct: 121 IERY 124