Jatropha Genome Database

JcCB0110731.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0110731.10 + phase: 0 /partial
         (503 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g11750.1                                                       564   e-161

>Glyma13g11750.1 
          Length = 1056

 Score =  564 bits (1453), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 291/507 (57%), Positives = 365/507 (71%), Gaps = 9/507 (1%)

Query: 1   DAVDDEK-FGGLNNTISSIQK-PLSNGSSGLDMLDDNSSAIGNGLRINTLARSSRGPLVD 58
           DAV +E  +  L +T +  QK PL   +        +SS  G   +I+T A S R PLVD
Sbjct: 278 DAVGEESGYNSLKSTNACGQKKPLYGWNQAPHSAVHDSSLNGFSSKIDTHAVSIRRPLVD 337

Query: 59  ISNTLGTSCTNHRRVNNEKRKLGRGTSISQFKRPRSSKFIIPLNKNVSYVLNGLSTSSSE 118
           +SNT     TN+R+  + KR+LG   ++S FK+PRSS+  +PL +++    + LS  SS 
Sbjct: 338 VSNTTNPDQTNNRQPASGKRRLGLRVTVSPFKKPRSSQISVPLEQDIGKSPHDLSQLSSG 397

Query: 119 NSCCRRTVSTRYPFRTPRMYIKEYFEVPSSDKNMLEHFTDQVGWIKPEAAEKYKFCDESG 178
            S C+R VS RYPF+ PRM+IK++F VP   +    HF +    +    AEKY F + SG
Sbjct: 398 VSGCKREVSIRYPFQYPRMHIKDFFVVPPLQEKA--HFPNLSRQVTSVNAEKYVFYERSG 455

Query: 179 VNCIGAEALYHMLVQSGASIQCVSKEWTMNHYKWIIWKLACYERCYPWKSATRFLTVSNV 238
            N +GAEA  H+L   GAS+   +KEW  NHYKWI+WKLACYER YP  SA +FLTV+NV
Sbjct: 456 DNGMGAEAFVHLLAHHGASMHFATKEWVTNHYKWIVWKLACYERYYPASSAGKFLTVTNV 515

Query: 239 HEELKYRYEREVNHGHRSAIKRILEGDSPPSSMMVLCISAICISCKPKIENL--ALNGDE 296
            EELKYRYEREVNHGHRS IK+ILEGD+PPSSMM+LCIS+IC S   +        NG +
Sbjct: 516 LEELKYRYEREVNHGHRSTIKKILEGDAPPSSMMILCISSICSSHATESGTCFETQNGTQ 575

Query: 297 CSNAARMELTDGWYSIDALLDIPLSKQLSAGKLFVGQKIRIWGARLCGWAGPVSPLEILA 356
            + A ++ELTDGWY ++A+LD+PLSKQ +AG+LFVGQK+RI  A LCGW GPVSPLE+  
Sbjct: 576 KAAAVKVELTDGWYLMNAILDVPLSKQHAAGRLFVGQKLRISRAGLCGWNGPVSPLEV-- 633

Query: 357 SRTVSLLLHINGTYRAHWADRLGFCKGVGPPLAFRCIKNNGGPIPRTLVGVTRIYPILYK 416
           S TVSLLLHINGTYRAHWA+RLGFCK  GPPLAFRCIK+NGG +P+TL G+TRIYPILY 
Sbjct: 634 SSTVSLLLHINGTYRAHWAERLGFCKIAGPPLAFRCIKSNGGLVPQTLAGITRIYPILYM 693

Query: 417 EKLRDGGSIVRSERMEARTMQLYNQRHSAVVEGIVSEYQRKGSHIYNDSDSEEGAKILKI 476
           E+L  G S+V SERME + M+LYNQR SAVV+GI+SEYQ++  HIY DSDS EGAKI  +
Sbjct: 694 ERLSSGRSVVMSERMENKMMELYNQRRSAVVDGIISEYQKERPHIYYDSDS-EGAKIYNM 752

Query: 477 LETAADPEVIMAEMSPEQLNSFASCQA 503
           LETA +PE +MA+MSPEQLNSFA+ +A
Sbjct: 753 LETAEEPEFLMADMSPEQLNSFATYKA 779