Jatropha Genome Database

JcCB0109661.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0109661.10 - phase: 0 
         (139 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g29910.1                                                       112   2e-25
Glyma15g03600.2                                                       111   3e-25
Glyma15g03600.1                                                       111   3e-25
Glyma19g32810.1                                                       110   5e-25
Glyma13g41820.1                                                       107   4e-24
Glyma12g05760.1                                                        88   2e-18
Glyma11g13760.2                                                        64   4e-11
Glyma11g13760.1                                                        64   4e-11

>Glyma03g29910.1 
          Length = 136

 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/138 (49%), Positives = 83/138 (60%), Gaps = 3/138 (2%)

Query: 1   MGRGRGKGKKQTVIASHEDPSIGEDDQVPAYKRRGRPTKPLXXXXXXXXXXXXXXXXXXX 60
           MGRGRGKGKKQ+VIA  EDP  GE+D+VPAY+RRGRP KPL                   
Sbjct: 1   MGRGRGKGKKQSVIA--EDPGSGEEDKVPAYRRRGRPVKPLTDEIEEVEVTEIIEKDEEN 58

Query: 61  XVNDSISNKDAKSLAATENGQKRKRPGHTSENADSVKEENDVRTKLSTDNSAVSGRFQQN 120
            V  + S  D K+ A T N +KRKR     E  D +KE+N +  K   ++S  +  F+QN
Sbjct: 59  -VKGNGSTDDLKTQAITVNKRKRKRSTQVKEKIDPLKEDNGILAKSGPEDSIKTTGFRQN 117

Query: 121 GSRRKNKPRRAAEAVVEC 138
           GSRRKNKP RAAEA V+C
Sbjct: 118 GSRRKNKPHRAAEAGVDC 135


>Glyma15g03600.2 
          Length = 137

 Score =  111 bits (277), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/139 (49%), Positives = 84/139 (60%), Gaps = 4/139 (2%)

Query: 1   MGRGRGKGKKQTVIASHEDPSIGEDDQVPAYKRRGRPTKPLXXXXXXXXXXXXXXXXXXX 60
           MGRGRGKGKK TV  + EDP+ GED++VP  KRRGRP KPL                   
Sbjct: 1   MGRGRGKGKKLTV-TNFEDPASGEDEKVPTQKRRGRPQKPLKDDFDEEEVEKIEDDSDN- 58

Query: 61  XVNDSISNKDAKSLAATENGQKRKRPGHTSENADSVKEENDV-RTKLSTDNSAVSGRFQQ 119
            V + +SNK+ KS  ATENG+KRKR     E  DSV+EEN +     +TD    +  F+ 
Sbjct: 59  -VKNGVSNKEMKSPTATENGRKRKRNSQVKEKLDSVEEENGIGNGSNTTDELTKTNGFRH 117

Query: 120 NGSRRKNKPRRAAEAVVEC 138
           NGSRRK+ PRRAAEA V+C
Sbjct: 118 NGSRRKSTPRRAAEAGVQC 136


>Glyma15g03600.1 
          Length = 137

 Score =  111 bits (277), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/139 (49%), Positives = 84/139 (60%), Gaps = 4/139 (2%)

Query: 1   MGRGRGKGKKQTVIASHEDPSIGEDDQVPAYKRRGRPTKPLXXXXXXXXXXXXXXXXXXX 60
           MGRGRGKGKK TV  + EDP+ GED++VP  KRRGRP KPL                   
Sbjct: 1   MGRGRGKGKKLTV-TNFEDPASGEDEKVPTQKRRGRPQKPLKDDFDEEEVEKIEDDSDN- 58

Query: 61  XVNDSISNKDAKSLAATENGQKRKRPGHTSENADSVKEENDV-RTKLSTDNSAVSGRFQQ 119
            V + +SNK+ KS  ATENG+KRKR     E  DSV+EEN +     +TD    +  F+ 
Sbjct: 59  -VKNGVSNKEMKSPTATENGRKRKRNSQVKEKLDSVEEENGIGNGSNTTDELTKTNGFRH 117

Query: 120 NGSRRKNKPRRAAEAVVEC 138
           NGSRRK+ PRRAAEA V+C
Sbjct: 118 NGSRRKSTPRRAAEAGVQC 136


>Glyma19g32810.1 
          Length = 183

 Score =  110 bits (275), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/138 (50%), Positives = 82/138 (59%), Gaps = 3/138 (2%)

Query: 1   MGRGRGKGKKQTVIASHEDPSIGEDDQVPAYKRRGRPTKPLXXXXXXXXXXXXXXXXXXX 60
           MGRGRGKGKKQ+VIA  EDP  GE+D+VPAY+RRGRP K L                   
Sbjct: 1   MGRGRGKGKKQSVIA--EDPGSGEEDKVPAYRRRGRPVK-LLTDEIEEVEVTEIIEKDEE 57

Query: 61  XVNDSISNKDAKSLAATENGQKRKRPGHTSENADSVKEENDVRTKLSTDNSAVSGRFQQN 120
            V  + S  D K+ A T N +KRKR     E  D +KE+N +  K   D+S  S  F+QN
Sbjct: 58  NVKGNGSTNDLKTQAITVNKRKRKRSTQVKEKIDPLKEDNGILAKPGPDDSIKSTGFRQN 117

Query: 121 GSRRKNKPRRAAEAVVEC 138
            SRRKNKPRRAAEA V+C
Sbjct: 118 RSRRKNKPRRAAEAGVDC 135


>Glyma13g41820.1 
          Length = 137

 Score =  107 bits (267), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/139 (48%), Positives = 83/139 (59%), Gaps = 4/139 (2%)

Query: 1   MGRGRGKGKKQTVIASHEDPSIGEDDQVPAYKRRGRPTKPLXXXXXXXXXXXXXXXXXXX 60
           MGRGRGKGKK TV A+ EDP+ GED++VP  KRRGRP KPL                   
Sbjct: 1   MGRGRGKGKKLTV-ANFEDPASGEDEKVPTQKRRGRPQKPL--KDDFDEEEVEKIEDDSD 57

Query: 61  XVNDSISNKDAKSLAATENGQKRKRPGHTSENADSVKEENDVRTKLS-TDNSAVSGRFQQ 119
            V +  + K+ KS  ATENG+KRKR     E  DSV++EN +    S TD    +  F+ 
Sbjct: 58  NVKNGTAYKEMKSPTATENGRKRKRNSQVKEKLDSVEKENSIGNGTSTTDELTKANGFRH 117

Query: 120 NGSRRKNKPRRAAEAVVEC 138
           NGSRRK+ PRRAAEA V+C
Sbjct: 118 NGSRRKSTPRRAAEAGVQC 136


>Glyma12g05760.1 
          Length = 143

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 1   MGRGRGKGKKQTVIASHEDPSIGEDDQVPAYKRRGRPTKPLXXXXXXXXXXXXXXXXXX- 59
           MGRGRGKGKK T I++ EDP  GED++VP  KRRGRP K                     
Sbjct: 1   MGRGRGKGKKLT-ISNEEDPISGEDEKVPKQKRRGRPQKLFKDDFDEEEIEEILEEDACG 59

Query: 60  -XXVNDSISNKDAKSLAATENGQKRKRPGHTSENADSVKEENDVRTKLS-TDNSAVSGRF 117
              V + +S+K+ K+L  T++G+KRKR  +  E  + + E+ +V    S TD       F
Sbjct: 60  GDNVKNVVSSKEMKNLNTTKHGRKRKR--NLQEKIEPIDEKINVVVNGSNTDELTKCNGF 117

Query: 118 QQNGSRRKNKPRRAAEAVVEC 138
           + NGSRRK+KPRRAAEA V+C
Sbjct: 118 RHNGSRRKSKPRRAAEAGVQC 138


>Glyma11g13760.2 
          Length = 137

 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 76/140 (54%), Gaps = 10/140 (7%)

Query: 1   MGRGRGKGKKQTVIASHEDPSIGEDDQVPAYKRRGRPTKPLXXXXXXXXXXXXXXXXXXX 60
           MGR RGKGKK T I++ ED    E+++VP  KRRGRP K                     
Sbjct: 1   MGRSRGKGKKLT-ISNEEDAISEEEEKVPKQKRRGRPQKLYKEDFDEEEIEEILEEDATS 59

Query: 61  --XVNDSISNKDAKSLAATENGQKRKRPGHTSENADSVKEENDVRTKLSTDNSAVSGRFQ 118
              V + +S+K+ K  + T++G+KRKR  +  E  + ++E+ +     S D    S  F+
Sbjct: 60  GDNVMNVVSSKEMKIPSTTKHGRKRKR--NLQEKIEPIEEKIE-----SIDELRKSNGFR 112

Query: 119 QNGSRRKNKPRRAAEAVVEC 138
            NGSRRK+KPRRAAEA V C
Sbjct: 113 HNGSRRKSKPRRAAEAGVLC 132


>Glyma11g13760.1 
          Length = 137

 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 76/140 (54%), Gaps = 10/140 (7%)

Query: 1   MGRGRGKGKKQTVIASHEDPSIGEDDQVPAYKRRGRPTKPLXXXXXXXXXXXXXXXXXXX 60
           MGR RGKGKK T I++ ED    E+++VP  KRRGRP K                     
Sbjct: 1   MGRSRGKGKKLT-ISNEEDAISEEEEKVPKQKRRGRPQKLYKEDFDEEEIEEILEEDATS 59

Query: 61  --XVNDSISNKDAKSLAATENGQKRKRPGHTSENADSVKEENDVRTKLSTDNSAVSGRFQ 118
              V + +S+K+ K  + T++G+KRKR  +  E  + ++E+ +     S D    S  F+
Sbjct: 60  GDNVMNVVSSKEMKIPSTTKHGRKRKR--NLQEKIEPIEEKIE-----SIDELRKSNGFR 112

Query: 119 QNGSRRKNKPRRAAEAVVEC 138
            NGSRRK+KPRRAAEA V C
Sbjct: 113 HNGSRRKSKPRRAAEAGVLC 132