Jatropha Genome Database

JcCB0109541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0109541.10 + phase: 1 /partial
         (146 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g04800.1                                                       160   4e-40
Glyma02g04810.1                                                       156   6e-39
Glyma16g22650.1                                                       155   2e-38
Glyma09g08170.2                                                        64   6e-11
Glyma09g08170.1                                                        63   1e-10
Glyma06g46550.1                                                        56   1e-08
Glyma03g28580.1                                                        54   4e-08
Glyma19g31330.1                                                        53   9e-08
Glyma13g38740.1                                                        51   4e-07
Glyma15g03370.1                                                        50   6e-07
Glyma03g28590.1                                                        49   2e-06
Glyma13g42020.1                                                        49   2e-06

>Glyma02g04800.1 
          Length = 367

 Score =  160 bits (405), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 75/131 (57%), Positives = 99/131 (75%), Gaps = 2/131 (1%)

Query: 13  CRKYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKLA 72
           C KYY++G KKG++EKF DLPGMPDNIHYDG GH+ IA+   +T   +  ++YPF+RK  
Sbjct: 236 CEKYYVQGPKKGTIEKFCDLPGMPDNIHYDGQGHYLIAMVTALTPELELAYRYPFIRKTF 295

Query: 73  GIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYDPELKLISSSVKIGNHLYCGSITYPYI 132
            IV K+ G++    KNGGV VVDLEGK  +HYYDP+L L +S++KIGNH+Y GSI YP++
Sbjct: 296 AIVTKYVGSL-PISKNGGVLVVDLEGKPTAHYYDPKLSL-TSAIKIGNHIYGGSIFYPFV 353

Query: 133 IRLNLAKYPAL 143
            R ++ KYPAL
Sbjct: 354 TRFDIEKYPAL 364


>Glyma02g04810.1 
          Length = 354

 Score =  156 bits (395), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 71/133 (53%), Positives = 99/133 (74%), Gaps = 4/133 (3%)

Query: 11  RRCRKYYIKGNKKGSLEKFT-DLPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVR 69
           +RCRKYYI+G KKG + +F  DLPGMPDNIHY G G ++IA+   +T  W  + +YPF++
Sbjct: 204 KRCRKYYIEGPKKGRIGEFCRDLPGMPDNIHYVGQGQYYIAMATSLTPEWDLLLRYPFIQ 263

Query: 70  KLAGIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYDPELKLISSSVKIGNHLYCGSITY 129
           K+A +V K+   +    +NGGV VVDLEGK  +HYYD EL LISS +KIGN++YCGS+ Y
Sbjct: 264 KVAAMVTKY---VLQPKENGGVLVVDLEGKPTAHYYDSELSLISSGIKIGNYIYCGSLMY 320

Query: 130 PYIIRLNLAKYPA 142
           P+++R ++ +YPA
Sbjct: 321 PFLVRFDMKQYPA 333


>Glyma16g22650.1 
          Length = 378

 Score =  155 bits (391), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 71/132 (53%), Positives = 97/132 (73%), Gaps = 2/132 (1%)

Query: 12  RCRKYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKL 71
           RC KY++ G K G++EKF DLPGMPDNIHYDG GH+ IA+   ++   +  ++YPF+RK 
Sbjct: 246 RCNKYFVLGPKTGTIEKFCDLPGMPDNIHYDGQGHYLIAMFTALSPELELAYRYPFIRKA 305

Query: 72  AGIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYDPELKLISSSVKIGNHLYCGSITYPY 131
             +  K+ G++    KNGGV VVDLEGK  +HYYDP+L L +S++KIGNH+Y GSI YP+
Sbjct: 306 FAMFTKYVGSLS-ISKNGGVLVVDLEGKPTAHYYDPKLAL-TSAIKIGNHIYAGSIFYPF 363

Query: 132 IIRLNLAKYPAL 143
           + R ++ KYPAL
Sbjct: 364 VTRFDVEKYPAL 375


>Glyma09g08170.2 
          Length = 279

 Score = 63.9 bits (154), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 4/134 (2%)

Query: 8   HYRRRCRKYYIKGNKKGSLEKFTD-LPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYP 66
             R RC +++++G  KG+ + F + LPG PDNI+    G FWIAL    +  ++ V  Y 
Sbjct: 143 QLRYRCLRHWLEGANKGTTDIFIENLPGAPDNINLAPDGSFWIALIQLTSEGFEFVHNYK 202

Query: 67  FVRKLAGIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYDPELKLI---SSSVKIGNHLY 123
             + L     +    +    K   V  V   G++I    D + K+I   +S+V+  +HLY
Sbjct: 203 ITKHLVASFPRLINLVNGCKKKATVVNVATNGRIIRKLDDSDGKVINFVTSAVEFEDHLY 262

Query: 124 CGSITYPYIIRLNL 137
            GS+   ++ +L L
Sbjct: 263 LGSLNSNFVGKLPL 276


>Glyma09g08170.1 
          Length = 358

 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 4/133 (3%)

Query: 9   YRRRCRKYYIKGNKKGSLEKFTD-LPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPF 67
           ++ RC +++++G  KG+ + F + LPG PDNI+    G FWIAL    +  ++ V  Y  
Sbjct: 223 WKYRCLRHWLEGANKGTTDIFIENLPGAPDNINLAPDGSFWIALIQLTSEGFEFVHNYKI 282

Query: 68  VRKLAGIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYDPELKLI---SSSVKIGNHLYC 124
            + L     +    +    K   V  V   G++I    D + K+I   +S+V+  +HLY 
Sbjct: 283 TKHLVASFPRLINLVNGCKKKATVVNVATNGRIIRKLDDSDGKVINFVTSAVEFEDHLYL 342

Query: 125 GSITYPYIIRLNL 137
           GS+   ++ +L L
Sbjct: 343 GSLNSNFVGKLPL 355


>Glyma06g46550.1 
          Length = 441

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 9/134 (6%)

Query: 12  RCRKYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKL 71
           R RKY++KG K G+ E    LPG PDN+  +  G FW+AL      +      YP +RK+
Sbjct: 308 RLRKYWLKGEKAGTSEILAILPGYPDNVRVNEDGDFWVALHSRRYMYAYYNGIYPKMRKI 367

Query: 72  -----AGIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYDPELKLISSSVKIGN---HLY 123
                  I + +   IG   ++  V     EGKL+    D E K++ +  ++      L+
Sbjct: 368 ILKLPIPIKIHYLLQIGGR-QHAAVIRYSPEGKLLQILEDSEGKVVKAVSEVEEKDGKLW 426

Query: 124 CGSITYPYIIRLNL 137
            GS+  P++   NL
Sbjct: 427 MGSVLMPFVAVYNL 440


>Glyma03g28580.1 
          Length = 371

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 11/139 (7%)

Query: 4   FGLVHYRRRCR--KYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKA 61
           F LV     CR  + ++ G K G ++ F  LPG PDNI  +  GHFW+AL  + + F K 
Sbjct: 229 FVLVAETATCRILQLWLGGPKAGQVDTFAVLPGFPDNIRRNSEGHFWVALHAKRSPFAKW 288

Query: 62  VFKYPFVRKL---AGIVLK--HKGNIGDTGKNGGVFVVDLEGKLISHYYDPE---LKLIS 113
           V   P+V K     G   K  H    G       V + D +G+++    D +   LK IS
Sbjct: 289 VSSNPWVGKALLKIGFNFKQLHTSFAGWKPHAAAVKLSD-KGEILEVLEDCDGKTLKFIS 347

Query: 114 SSVKIGNHLYCGSITYPYI 132
              +    L+  S+  P+I
Sbjct: 348 EVEEKDGKLWIASVLMPFI 366


>Glyma19g31330.1 
          Length = 371

 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 11/139 (7%)

Query: 4   FGLVHYRRRCR--KYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKA 61
           F LV     CR  + +++G K G ++ F  LPG PDN+  +  GHFW+AL  + + F K 
Sbjct: 229 FVLVAETTTCRILQLWLRGPKAGHVDTFAVLPGFPDNVRRNSQGHFWVALHAKGSRFAKW 288

Query: 62  VFKYPFVRKL---AGIVLK--HKGNIGDTGKNGGVFVVDLEGKLISHYYDPE---LKLIS 113
           V   P+  K     G   K  H    G       V + D +G+++    D +   LK IS
Sbjct: 289 VSSNPWAGKALLKIGFNFKQLHSSFAGWKPHAAAVKLSD-KGEILEVLEDCDGKTLKFIS 347

Query: 114 SSVKIGNHLYCGSITYPYI 132
              +    L+  S+  P+I
Sbjct: 348 EVEEKDGKLWIASVLMPFI 366


>Glyma13g38740.1 
          Length = 389

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 35/60 (58%)

Query: 12  RCRKYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKL 71
           R RKY++KG K G+ E    LPG PDN+  +G+G FW+A+      +      YP +RK+
Sbjct: 282 RLRKYWLKGVKAGTSEILAILPGFPDNVRVNGNGDFWVAIHCRRCVYSYLNALYPKMRKV 341


>Glyma15g03370.1 
          Length = 381

 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 6/131 (4%)

Query: 12  RCRKYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKL 71
           R  K +I+G K G++E   DLPG PDN+  +  G FW+A+    T   + +   P++R +
Sbjct: 249 RLMKLWIEGPKSGTVELLADLPGFPDNVRINEKGQFWVAIDCCRTPAQEVLSHNPWLRNI 308

Query: 72  ---AGIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYDPE---LKLISSSVKIGNHLYCG 125
                I +              + ++D +G+++    D +   +KL+S   +    L+ G
Sbjct: 309 YFRLPIRMSLLARAMGMKMYTVISLLDDKGEVLEVLEDQQGQVMKLVSEVREEQGKLWIG 368

Query: 126 SITYPYIIRLN 136
           ++ + +I  L+
Sbjct: 369 TVAHNHIATLS 379


>Glyma03g28590.1 
          Length = 382

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%)

Query: 12  RCRKYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKL 71
           R  +Y+++  K G+LE F DLPG PDNI     G FW+ +        + +  YP++ K+
Sbjct: 239 RVLRYWLETPKTGTLEVFADLPGFPDNIKRSPRGGFWVGIYSRREKIIQWILSYPWIGKV 298


>Glyma13g42020.1 
          Length = 403

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 6/131 (4%)

Query: 12  RCRKYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKL 71
           R  K + +G K GS+E   DLPG PDN+  +  G FW+A+    T   + +   P++R +
Sbjct: 271 RLMKLWTEGPKSGSVELLADLPGFPDNVRINEKGQFWVAIDCCRTPAQEVLSHNPWLRNI 330

Query: 72  ---AGIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYDPE---LKLISSSVKIGNHLYCG 125
                I +              + ++D +G+++    D +   +KL+S   +    L+ G
Sbjct: 331 YFRLPIRMSLLARAMGMKMYTVISLLDDKGEVLEVLEDQKGEVMKLVSEVREEQGKLWIG 390

Query: 126 SITYPYIIRLN 136
           ++ + +I  L+
Sbjct: 391 TVAHNHIATLS 401