Jatropha Genome Database

JcCB0108291.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0108291.10 + phase: 0 /partial
         (189 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g26810.1                                                        50   2e-06
Glyma10g23910.1                                                        49   3e-06
Glyma15g33030.1                                                        49   3e-06
Glyma06g27680.1                                                        49   4e-06

>Glyma15g26810.1 
          Length = 2771

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 3/95 (3%)

Query: 85  ATNQLGSSNTVRAVKEKKKREFTDLGMPLSAVMRSCIENAVLSKLPINPSKPIQGRFADQ 144
           AT   G+SNT R    +   EFT L M    ++ S I N +    P    +P   ++ D 
Sbjct: 464 ATRPAGNSNTTRNFPPRPLPEFTPLPMTYEDLLPSLIANHLAVVTPGRVFEPPFPKWYDP 523

Query: 145 DY--EYHQ-CKGHSIDNCLKLRHDIQDLIDSGIIT 176
           +   +YH    GHSI+ CL L++ +Q L+D+G +T
Sbjct: 524 NATCKYHGGAPGHSIEKCLALKYKVQHLMDAGWLT 558


>Glyma10g23910.1 
          Length = 2786

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 9/98 (9%)

Query: 85   ATNQLGSSNTVRAVKEKKKREFTDLGMPLSAVMRSCIENAVLSKLPINPSKPIQGRFADQ 144
             T+  G+SNT R    +  +EFT L M    ++ S I N +     + P + +Q  F   
Sbjct: 1016 TTHSAGNSNTTRNFPPRPFQEFTPLPMTYEDLLPSLIANHLAV---VTPGRVLQPPFPKW 1072

Query: 145  DYEYHQCK------GHSIDNCLKLRHDIQDLIDSGIIT 176
                  CK      GHS++ CL L++ +Q L+D+G +T
Sbjct: 1073 YDPNATCKYHGGVPGHSVEKCLALKYKVQHLMDAGWLT 1110


>Glyma15g33030.1 
          Length = 2891

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 9/98 (9%)

Query: 85   ATNQLGSSNTVRAVKEKKKREFTDLGMPLSAVMRSCIENAVLSKLPINPSKPIQGRFADQ 144
             T  +G+SNT R    +  +EFT L M    ++ S I N +     + P + +Q  F   
Sbjct: 1039 TTRPVGNSNTTRNFPPRPFQEFTPLPMTYEDLLPSLIANHLAV---VTPGRVLQPPFPKW 1095

Query: 145  DYEYHQCK------GHSIDNCLKLRHDIQDLIDSGIIT 176
                  CK      GHS++ CL L++ +Q L+D+G +T
Sbjct: 1096 YDPNATCKYHGGVPGHSVEKCLALKYKVQHLMDAGWLT 1133


>Glyma06g27680.1 
          Length = 2556

 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 3/95 (3%)

Query: 85   ATNQLGSSNTVRAVKEKKKREFTDLGMPLSAVMRSCIENAVLSKLPINPSKPIQGRFADQ 144
            AT   G+SNT R    +   EFT L M    ++ S I N +    P    +P   ++ D 
Sbjct: 912  ATRPAGNSNTTRNFPPRPLPEFTPLPMTYEDLLPSLIANHLAVVTPGRVLEPPFPKWYDP 971

Query: 145  DY--EYHQ-CKGHSIDNCLKLRHDIQDLIDSGIIT 176
            +   +YH    GHS++ CL L++ +Q L+D+G +T
Sbjct: 972  NATCKYHGGAPGHSVEKCLALKYKVQHLMDAGWLT 1006