Jatropha Genome Database
- JcCB0108161.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0108161.10 - phase: 1 /pseudo/partial
(91 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g20270.2 96 6e-21
Glyma09g20270.1 96 8e-21
Glyma17g36790.1 87 3e-18
Glyma10g11410.1 74 4e-14
Glyma06g24540.1 69 1e-12
Glyma17g12700.1 62 2e-10
Glyma05g08270.1 61 3e-10
Glyma13g07580.1 55 1e-08
Glyma08g25950.1 52 1e-07
Glyma08g25950.2 52 1e-07
Glyma10g37920.1 50 4e-07
Glyma19g10780.1 50 8e-07
Glyma06g32690.1 49 1e-06
Glyma08g48030.1 47 3e-06
Glyma03g38570.1 47 7e-06
>Glyma09g20270.2
Length = 253
Score = 96.3 bits (238), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Query: 4 LYLLKLVYSILWVPHKTQRHFRKQGIQGPDYRPIIGNSSEMKLKREEAKSKVSDD----- 58
Y K YS WVP +T+RHF++QGI GP YRPI GN+SE++ EAKS+ S
Sbjct: 13 FYAAKFFYSNFWVPWRTERHFKRQGIGGPGYRPIFGNTSEIRRLYAEAKSEASASPPPFH 72
Query: 59 HSILNRVVPAYSTWSRMYGKNYLYWF 84
H I+ RV P Y WSR YGK +LYWF
Sbjct: 73 HDIMGRVAPFYDRWSRAYGKTFLYWF 98
>Glyma09g20270.1
Length = 508
Score = 95.9 bits (237), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Query: 4 LYLLKLVYSILWVPHKTQRHFRKQGIQGPDYRPIIGNSSEMKLKREEAKSKVSDD----- 58
Y K YS WVP +T+RHF++QGI GP YRPI GN+SE++ EAKS+ S
Sbjct: 13 FYAAKFFYSNFWVPWRTERHFKRQGIGGPGYRPIFGNTSEIRRLYAEAKSEASASPPPFH 72
Query: 59 HSILNRVVPAYSTWSRMYGKNYLYWF 84
H I+ RV P Y WSR YGK +LYWF
Sbjct: 73 HDIMGRVAPFYDRWSRAYGKTFLYWF 98
>Glyma17g36790.1
Length = 503
Score = 87.0 bits (214), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 8 KLVYSILWVPHKTQRHFRKQGIQGPDYRPIIGNSSEMKLKREEAKSK-VSDDHSILNRVV 66
++ YSI+WVP RHFR+QGI+GP YRPI GN+ E++ E +S+ ++ H IL RV
Sbjct: 19 RVAYSIIWVPWVIARHFREQGIRGPSYRPIKGNTDEIRGMYAEVQSRPMALCHDILERVC 78
Query: 67 PAYSTWSRMYGKNYLYW 83
P Y WSRMYGK LYW
Sbjct: 79 PFYHKWSRMYGKTVLYW 95
>Glyma10g11410.1
Length = 313
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 10/83 (12%)
Query: 4 LYLLKLVYSILWVPHKTQRHFRKQGIQGPDYRPIIGNSSEMKLKREEAKSK--VSDDHSI 61
Y++ YS LW+P +T+ +F++QGI GPDYR I+GNS E++ +EAKS+ S DH
Sbjct: 13 FYMVNFFYSNLWIPWRTEHYFKEQGIWGPDYRLILGNSLEIRRLYDEAKSEPTPSFDHH- 71
Query: 62 LNRVVPAYSTWSRMYGKNYLYWF 84
+ WSR YGK +LYWF
Sbjct: 72 -------HHKWSRTYGKTFLYWF 87
>Glyma06g24540.1
Length = 526
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 11/93 (11%)
Query: 1 ILFLYL------LKLVYSILWVPHKTQRHFRKQGIQGPDYRPIIGNSSE---MKLKREEA 51
ILF++L LK+ S+ W P K + HF QGI+GP YR IGN E M +K E
Sbjct: 8 ILFVFLMTLLLVLKVTISLWWRPRKIEGHFSNQGIRGPPYRFFIGNVKELVGMMMKASEK 67
Query: 52 KSKVSDDHSILNRVVPAYSTWSRMYGKNYLYWF 84
S H+IL RV+ Y W ++YG +L WF
Sbjct: 68 PMPFS--HNILPRVLSFYHHWKKIYGATFLVWF 98
>Glyma17g12700.1
Length = 517
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 15 WVPHKTQRHFRKQGIQGPDYRPIIGNSSEMKLKREEAKSK-VSDDHSILNRVVPAYSTWS 73
W P K + HF KQGI+GP YR IGN E+ +A S+ + H+IL RV+ Y W
Sbjct: 30 WRPRKIEAHFSKQGIRGPPYRFFIGNVKELVGMMLKASSQPMPFSHNILPRVLSFYHHWK 89
Query: 74 RMYGKNYLYWF 84
++YG +L WF
Sbjct: 90 KIYGATFLVWF 100
>Glyma05g08270.1
Length = 519
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 15 WVPHKTQRHFRKQGIQGPDYRPIIGNSSEMKLKREEAKSK-VSDDHSILNRVVPAYSTWS 73
W P K + HF KQGI+GP YR IGN E+ +A S+ + H+IL RV+ Y W
Sbjct: 30 WRPRKIEGHFSKQGIRGPPYRFFIGNVKELVGMMLKASSQPMPFSHNILPRVLSFYHHWK 89
Query: 74 RMYGKNYLYWF 84
++YG +L WF
Sbjct: 90 KIYGATFLVWF 100
>Glyma13g07580.1
Length = 512
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 1 ILFLYLLKLVY---SILWV-PHKTQRHFRKQGIQGPDYRPIIGNSSEMK--LKREEAKSK 54
I LLK+ Y S W+ P + ++ +QG+ GP R +IGN +M + R ++
Sbjct: 12 IFVTVLLKVAYDTISCYWLTPMRIRKIMERQGVHGPKPRFLIGNIIDMTSLVSRAVSQDM 71
Query: 55 VSDDHSILNRVVPAYSTWSRMYGKNYLYW 83
+ +H I+ R++P + WS YGK +LYW
Sbjct: 72 KTINHDIVGRLLPHFVAWSNQYGKRFLYW 100
>Glyma08g25950.1
Length = 533
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 17 PHKTQRHFRKQGIQGPDYRPIIGNSSEMKLKREEAKSKVSDDHS--ILNRVVPAYSTWSR 74
P + +R ++QGIQG YRP+IG+ +M +EAKSK D HS I RV+P
Sbjct: 49 PKRIERRLKEQGIQGNSYRPLIGDIRDMVKMIKEAKSKPMDPHSNDIAPRVLPYVVHTIA 108
Query: 75 MYGKNYLYWF 84
YGK+ W
Sbjct: 109 KYGKSSFMWL 118
>Glyma08g25950.2
Length = 398
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 17 PHKTQRHFRKQGIQGPDYRPIIGNSSEMKLKREEAKSKVSDDHS--ILNRVVPAYSTWSR 74
P + +R ++QGIQG YRP+IG+ +M +EAKSK D HS I RV+P
Sbjct: 49 PKRIERRLKEQGIQGNSYRPLIGDIRDMVKMIKEAKSKPMDPHSNDIAPRVLPYVVHTIA 108
Query: 75 MYGKNYLYWF 84
YGK+ W
Sbjct: 109 KYGKSSFMWL 118
>Glyma10g37920.1
Length = 518
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 12 SILWV--PHKTQRHFRKQGIQGPDYRPIIGNSSEMKLKREEAKSKVSDD--HSILNRVVP 67
+ WV P++T + +K G+ GP +GN EMK K S VS + H I + V P
Sbjct: 27 TFYWVVFPNQTLKKLKKCGLGGPTPSFPLGNIEEMKRKNNIQSSIVSSNFSHDIHSSVFP 86
Query: 68 AYSTWSRMYGKNYLYWF 84
+S+W + +GK ++YW
Sbjct: 87 YFSSWQKSHGKVFVYWL 103
>Glyma19g10780.1
Length = 214
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 4 LYLLKLVYSILWVPHKTQRHFRKQGIQGPDYRPIIGNSSEMK 45
Y +KL YS LWVP +T+ HF++Q I P Y I GNSSE++
Sbjct: 13 FYTVKLFYSNLWVPWRTEHHFKRQAIGCPGYCLIFGNSSEIR 54
>Glyma06g32690.1
Length = 518
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 6 LLKLVYSILWV-PHKTQRHFRKQGIQGPDYRPIIGNSSEMKLKREEAKSKVSD-DHSILN 63
LL S LW+ P + +R+ R+QG++G Y G+ + ++AKSK D + +
Sbjct: 21 LLTKALSWLWLEPKRAERYLRRQGLKGNSYTLFFGDIKAISTLIQKAKSKPIDINDDVTP 80
Query: 64 RVVPAYSTWSRMYGKNYLYWF 84
R+VP R YGKN +W+
Sbjct: 81 RLVPFQHQLIRNYGKNSFFWY 101
>Glyma08g48030.1
Length = 520
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 3 FLYLLKLVY---SILWV-PHKTQRHFRKQGIQGPDYRPIIGNSSEMK--LKREEAKSKVS 56
+ LLKLVY S W+ P + ++ QG++GP GN +M + + ++ +
Sbjct: 15 IILLLKLVYDNLSCYWLTPLRIKKMMDMQGVRGPKPCFFTGNILDMASLVSKATSQDMKT 74
Query: 57 DDHSILNRVVPAYSTWSRMYGKNYLYW 83
H I+ R++P + WS +GK +LYW
Sbjct: 75 ISHDIVGRLLPHFLLWSGQFGKRFLYW 101
>Glyma03g38570.1
Length = 366
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 1 ILFLYLLKLVYSILWV-PHKTQRHFRKQGIQGPDYRPIIGNSSE-MKLKREEAKSKVSDD 58
IL L L V + LW+ P + +R R+QG+QG YR ++G+ E M +++E ++
Sbjct: 14 ILALTLAWRVLNWLWLRPKRLERLLREQGLQGNPYRLLVGDLKEIMNMQKEVTSKPMNLS 73
Query: 59 HSILNRVVPAYSTWSRMYGKNYLYWFWKQ 87
H I+ RV +GKN WF ++
Sbjct: 74 HDIVPRVFSFLQHTLNTHGKNSFIWFGRK 102