Jatropha Genome Database

JcCB0107751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0107751.10 - phase: 0 /pseudo/partial
         (484 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g09300.1                                                        90   7e-18
Glyma05g02090.1                                                        86   6e-17
Glyma03g07780.1                                                        77   5e-14
Glyma07g35720.1                                                        67   3e-11
Glyma02g34680.1                                                        62   1e-09
Glyma20g08000.1                                                        57   5e-08
Glyma18g17370.1                                                        56   9e-08
Glyma18g38640.1                                                        54   5e-07
Glyma14g34030.1                                                        53   1e-06
Glyma17g16140.1                                                        50   7e-06
Glyma09g09240.1                                                        50   8e-06

>Glyma13g09300.1 
          Length = 177

 Score = 89.7 bits (221), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 64/103 (62%)

Query: 56  LASLWKPIHGVNIREISKNLFLFQFLDVADTNRVVEMSPWSFDQHLLLFETLGLDXQPQN 115
           +A++WKP+ GV I  I    FLF+F    D  RV++   W FD+++L+   +  D  P  
Sbjct: 1   MANIWKPLKGVTISYIGNGTFLFRFYHQVDIQRVLKGGSWRFDRYMLILGVITEDENPLE 60

Query: 116 VQPFHTHIWLQVHDIPNGFISTKMAQSIGNYVEEFVSANETNF 158
           +  F+   W+Q+H++P GF+S ++ Q+IGNY+ +F+  +E NF
Sbjct: 61  IPLFNVPFWVQIHNLPLGFMSKRVGQNIGNYLGKFLEYDEKNF 103


>Glyma05g02090.1 
          Length = 129

 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 60/105 (57%)

Query: 85  DTNRVVEMSPWSFDQHLLLFETLGLDXQPQNVQPFHTHIWLQVHDIPNGFISTKMAQSIG 144
           D  R+++  PWSFD HLL+   +     P  V  +    W+Q H+IP  F++    Q+IG
Sbjct: 2   DVQRILKRGPWSFDGHLLVLGVIKEGESPSQVPLYTVPFWVQEHNIPAAFMTFAPGQNIG 61

Query: 145 NYVEEFVSANETNFSSMWQGFIWIRILIDTRIPLKRRMHIKKLRG 189
           NY+ EF+  N  N  S W+ ++ +R+LI+ R PLKR   I+K  G
Sbjct: 62  NYLGEFLEYNNKNNLSFWRKYMRLRVLINVRKPLKRTKKIRKPGG 106


>Glyma03g07780.1 
          Length = 283

 Score = 77.0 bits (188), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 1/131 (0%)

Query: 61  KPIHGVNIREISKNLFLFQFLDVADTNRVVEMSPWSFDQHLLLFETLGLDXQPQNVQPFH 120
           KP  G+ I  +     LFQF  V D   V++  P SFD+++L+   +     P+ V  F 
Sbjct: 113 KPFQGIIISNLEAGRVLFQFYHVVDYQIVLKGGPGSFDRNMLILGVIKEGDDPKIVSLFC 172

Query: 121 THIWLQVHDIPNGFISTKMAQSIGNYVEEFVSANETNFSSMWQGFIWIRILIDTRIPLKR 180
               +Q+H++P GF+S  + +SIGN++++++  +E N  +  + F+ I +L+D + P  +
Sbjct: 173 IPFLVQIHNLPMGFMSQMVGESIGNFIDQYLDYDEKNNVNYLRSFMRIGVLMDVQKPFMK 232

Query: 181 RMHIKKLRGTY 191
              IKK  G +
Sbjct: 233 S-KIKKPGGEF 242


>Glyma07g35720.1 
          Length = 124

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 56/104 (53%)

Query: 88  RVVEMSPWSFDQHLLLFETLGLDXQPQNVQPFHTHIWLQVHDIPNGFISTKMAQSIGNYV 147
           R+VE   WS D H+L+   L        +  F+   W+Q+HD+P GF++  + + + N++
Sbjct: 3   RIVESGSWSLDNHMLVLGRLSAGDMLTQIPLFNIPFWVQLHDVPTGFVTPMVGKHMENFI 62

Query: 148 EEFVSANETNFSSMWQGFIWIRILIDTRIPLKRRMHIKKLRGTY 191
            EF+  +  N +   + F+ I++L+  R PLK    ++K  G +
Sbjct: 63  REFLEYDSKNNTGGSRPFMRIKVLVGLRNPLKTGKKLRKPEGEW 106


>Glyma02g34680.1 
          Length = 129

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 46/70 (65%)

Query: 88  RVVEMSPWSFDQHLLLFETLGLDXQPQNVQPFHTHIWLQVHDIPNGFISTKMAQSIGNYV 147
           R  +  PWSFD+HLL+ + +     P+++  FH  IW+Q+H++P GF++ ++ QSI N++
Sbjct: 58  RATKWRPWSFDKHLLILKIIKDGENPESILLFHLPIWIQIHNLPIGFMTQEVGQSIENFL 117

Query: 148 EEFVSANETN 157
            + +  +E N
Sbjct: 118 GKLLEYDEKN 127


>Glyma20g08000.1 
          Length = 197

 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 3/91 (3%)

Query: 101 LLLFETLGLDXQPQNVQPFHTHIWLQVHDIPNGFISTKMAQSIGNYVEEFVSANETNFSS 160
           LL+   L +D  P+ V       W+ +H++P GF+   + + +GN+V EF+  +  N   
Sbjct: 23  LLILGRLSVDGTPKIVTMHDVPFWIPIHNLPIGFMIETVGKHLGNFVGEFMEYDPNNNLG 82

Query: 161 MWQGFIWIRILIDTRIPLKRRMHIKKLRGTY 191
           +W+ ++ I++ +D R+PLK+   +KK  G +
Sbjct: 83  VWRAYMRIQVRVDRRLPLKK---VKKPGGEW 110


>Glyma18g17370.1 
          Length = 110

 Score = 55.8 bits (133), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 17/112 (15%)

Query: 78  FQFLDVADTNRVVEMSPWSFDQHLLLFETLGLDXQPQNVQPFHTHIWLQVHDIPNGFIST 137
           FQF    D  RV++  PWSFD+++L+   +     P+ V  F+                 
Sbjct: 1   FQFYHTVDYQRVLKGGPWSFDKNVLILGAIKEREDPKVVPLFYM---------------- 44

Query: 138 KMAQSIGNYVEEFVSANETNFSSMWQGFIWIRILIDTRIPLKRRMHIKKLRG 189
            + + +GNY+ +F+  +E N  +  + F+ I++L+D R PL R   I K  G
Sbjct: 45  -IGEGLGNYMGQFLEYDEKNNVNFLRSFMRIKVLLDVRKPLLRSKKIIKPDG 95


>Glyma18g38640.1 
          Length = 206

 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 38/67 (56%)

Query: 119 FHTHIWLQVHDIPNGFISTKMAQSIGNYVEEFVSANETNFSSMWQGFIWIRILIDTRIPL 178
           FH   W+QVH +P GF+S  + Q + N + +FV  +  N    W+ +I I +L+D R PL
Sbjct: 124 FHVPFWVQVHRLPVGFMSKVVGQHLRNSIRDFVEYDTRNNMLFWKKYIRICVLVDLRRPL 183

Query: 179 KRRMHIK 185
            +   +K
Sbjct: 184 MKNKKVK 190


>Glyma14g34030.1 
          Length = 112

 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 44/73 (60%)

Query: 119 FHTHIWLQVHDIPNGFISTKMAQSIGNYVEEFVSANETNFSSMWQGFIWIRILIDTRIPL 178
           F+  +W+Q+HD+P GF++  + + + N++ EF+  +  N +   + F+ I++L+  R PL
Sbjct: 4   FNIPLWVQLHDVPTGFVTPMVGKHMENFIREFLEYDSKNNTGGSRPFMRIKVLVGLRNPL 63

Query: 179 KRRMHIKKLRGTY 191
           K    + K +G +
Sbjct: 64  KTGKKLIKPKGEW 76


>Glyma17g16140.1 
          Length = 158

 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)

Query: 118 PFHT-HIWLQVHDIPNGFISTKMAQSIGNYVEEFVSANETNFSSMWQGFIWIRILIDTRI 176
           P H   IW+Q H+I  GF    + Q+IGN++ +++  ++   SS W  +  IR++ID   
Sbjct: 30  PLHKISIWIQFHNIHLGFTMIIVGQNIGNFLGQYLIYDDKQNSSRWMSYKRIRVVIDINK 89

Query: 177 PLKRRMHIKKLRG 189
           PLK    I+K  G
Sbjct: 90  PLKCTKKIRKEGG 102


>Glyma09g09240.1 
          Length = 208

 Score = 49.7 bits (117), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 11/102 (10%)

Query: 56  LASLWKPIHGVNIREISKNLFLFQFLDVADTNRVVEMSPWSFDQHLLLFETLGLDXQPQN 115
           +  +W+ I  + I E+  N FLF F    D  R           ++L+  +   D   ++
Sbjct: 27  MVEVWRHIGEITIDELQPNHFLFLFYHKVDVQR-----------YMLILGSKRSDENLKS 75

Query: 116 VQPFHTHIWLQVHDIPNGFISTKMAQSIGNYVEEFVSANETN 157
           +  +    W+Q+H++P GF++  + Q++GN++  F+  +E N
Sbjct: 76  IPLYMLAFWVQIHNLPLGFMTQVIGQNLGNFIVNFLEYDEKN 117